| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is yvlD [H]
Identifier: 28377612
GI number: 28377612
Start: 688384
End: 688749
Strand: Direct
Name: yvlD [H]
Synonym: lp_0753
Alternate gene names: 28377612
Gene position: 688384-688749 (Clockwise)
Preceding gene: 28377611
Following gene: 28377613
Centisome position: 20.81
GC content: 40.16
Gene sequence:
>366_bases GTGGGCTTTTGGAAACGAATTTTAATCAATACAATCTTATTTATTGCGATTGCTGGCTTTTTTCAGAGCAGTTTTCACGT TGCAAGTGTGTGGATGGCTTTAATTGCCAGTTTTGTGCTTGCAATTTTAAACGCCGCTATTAAGCCGTTTTTGCTGTTAT TATCGTTACCGATTACGTTATTGACACTCGGGCTATTCAGTATTGTCATCAATGGTTTTATGCTTCAGATGACATCCTAC GTTGTGGGGAAGGCCAATTTCGGCTTTTCGAGTTTTGGCATGGCGATGGTTGTTTCGATTCTCATGTCAATTGCTAACGT GATTGTTTCCAACTTTTTCGCGAAAGACGGCGTTGATGGTGAATAA
Upstream 100 bases:
>100_bases CGGTACTCAAGCTAAACCGCAAGCGCATGGGCGCAAAGAGATTCATAACGTTCATGAAGAGGATGATCCGCGTCACTAAG ATTAATGGAGTGATTATACA
Downstream 100 bases:
>100_bases AGCGCTTTAAAGTGCTAAGATTAGAAGATAGAAATAATCCGTTTTCAGTCATAAAAGTGTGGCCGCTTGAAAGGGTAGCG TAATGGCGCGACTGGACAAC
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MGFWKRILINTILFIAIAGFFQSSFHVASVWMALIASFVLAILNAAIKPFLLLLSLPITLLTLGLFSIVINGFMLQMTSY VVGKANFGFSSFGMAMVVSILMSIANVIVSNFFAKDGVDGE
Sequences:
>Translated_121_residues MGFWKRILINTILFIAIAGFFQSSFHVASVWMALIASFVLAILNAAIKPFLLLLSLPITLLTLGLFSIVINGFMLQMTSY VVGKANFGFSSFGMAMVVSILMSIANVIVSNFFAKDGVDGE >Mature_120_residues GFWKRILINTILFIAIAGFFQSSFHVASVWMALIASFVLAILNAAIKPFLLLLSLPITLLTLGLFSIVINGFMLQMTSYV VGKANFGFSSFGMAMVVSILMSIANVIVSNFFAKDGVDGE
Specific function: Unknown
COG id: COG1950
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007165 [H]
Pfam domain/function: PF04020 DUF360 [H]
EC number: NA
Molecular weight: Translated: 13134; Mature: 13003
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFWKRILINTILFIAIAGFFQSSFHVASVWMALIASFVLAILNAAIKPFLLLLSLPITL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLGLFSIVINGFMLQMTSYVVGKANFGFSSFGMAMVVSILMSIANVIVSNFFAKDGVDG HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC E C >Mature Secondary Structure GFWKRILINTILFIAIAGFFQSSFHVASVWMALIASFVLAILNAAIKPFLLLLSLPITL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLGLFSIVINGFMLQMTSYVVGKANFGFSSFGMAMVVSILMSIANVIVSNFFAKDGVDG HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]