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The map label for this gene is 28377573

Identifier: 28377573

GI number: 28377573

Start: 648340

End: 648687

Strand: Direct

Name: 28377573

Synonym: lp_0706

Alternate gene names: NA

Gene position: 648340-648687 (Clockwise)

Preceding gene: 28377572

Following gene: 28377574

Centisome position: 19.6

GC content: 43.68

Gene sequence:

>348_bases
GTGGATAAGCGTGATTTATACGATAGTTTCGGTGAGATGGAACAACAGATGCAACAAATGCTAGACAAAATGGCTAAGTT
ACGCGCCGATATGACAACGGTGTTAGAGAAAAACGCGGAATTGGTCATTGAAAATGAACATTTACGTGAACACATGGTCG
AAATTGAAAATGAATTGCCGAAAAAAGCGGCTAGCACGACCACGCTCTCAAAGTCACGGCAAAACTTGGAAAAACTCTAT
GATGAGGGCTTCCACGTCTGCAACCAGTTTTACGGCAAACGGCGTGACGATGACGAATCCTGCGTTTTTTGTTTGGAAGT
CATTTATGGTGAACGTGAACGCGCATAG

Upstream 100 bases:

>100_bases
TAGCAATATTAGTTTTCAAAATGTCTTAGAAGGCTTAACGTTAAAGTTATGGCCGATTTTTCAAACAAACGCTTAAATAA
AGGAAAACGAGGGTGAGCGC

Downstream 100 bases:

>100_bases
TCGAAAAAGTCTGGGAGTAGTCCCAGACTTTTTGTGCTTTTCACCACGAGTCACTCATAGGAACAAGTCACGGTCGAGAG
GATTGTTAGGAGGACGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MDKRDLYDSFGEMEQQMQQMLDKMAKLRADMTTVLEKNAELVIENEHLREHMVEIENELPKKAASTTTLSKSRQNLEKLY
DEGFHVCNQFYGKRRDDDESCVFCLEVIYGERERA

Sequences:

>Translated_115_residues
MDKRDLYDSFGEMEQQMQQMLDKMAKLRADMTTVLEKNAELVIENEHLREHMVEIENELPKKAASTTTLSKSRQNLEKLY
DEGFHVCNQFYGKRRDDDESCVFCLEVIYGERERA
>Mature_115_residues
MDKRDLYDSFGEMEQQMQQMLDKMAKLRADMTTVLEKNAELVIENEHLREHMVEIENELPKKAASTTTLSKSRQNLEKLY
DEGFHVCNQFYGKRRDDDESCVFCLEVIYGERERA

Specific function: Involved in initiation control of chromosome replication

COG id: COG4467

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yabA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YABA_LACPL (Q88YP3)

Other databases:

- EMBL:   AL935253
- RefSeq:   NP_784465.1
- GeneID:   1062799
- GenomeReviews:   AL935263_GR
- KEGG:   lpl:lp_0706
- NMPDR:   fig|220668.1.peg.599
- HOGENOM:   HBG514867
- OMA:   VHYGSVR
- ProtClustDB:   CLSK2520061
- BioCyc:   LPLA220668:LP_0706-MONOMER
- HAMAP:   MF_01159
- InterPro:   IPR010377
- PIRSF:   PIRSF021439

Pfam domain/function: PF06156 DUF972

EC number: NA

Molecular weight: Translated: 13615; Mature: 13615

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKRDLYDSFGEMEQQMQQMLDKMAKLRADMTTVLEKNAELVIENEHLREHMVEIENELP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECHHHHHHHHHHHHHHHH
KKAASTTTLSKSRQNLEKLYDEGFHVCNQFYGKRRDDDESCVFCLEVIYGERERA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDKRDLYDSFGEMEQQMQQMLDKMAKLRADMTTVLEKNAELVIENEHLREHMVEIENELP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECHHHHHHHHHHHHHHHH
KKAASTTTLSKSRQNLEKLYDEGFHVCNQFYGKRRDDDESCVFCLEVIYGERERA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566