Definition | Lactobacillus plantarum WCFS1, complete genome. |
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Accession | NC_004567 |
Length | 3,308,274 |
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The map label for this gene is 28377539
Identifier: 28377539
GI number: 28377539
Start: 614446
End: 614769
Strand: Direct
Name: 28377539
Synonym: lp_0667
Alternate gene names: NA
Gene position: 614446-614769 (Clockwise)
Preceding gene: 28377538
Following gene: 28377540
Centisome position: 18.57
GC content: 40.74
Gene sequence:
>324_bases ATGCGCTATCCGGATAAAGTTTATTTGTTAACTAAGCTTCCTGATGATGACCCTAATGGTCTTAATCATCAAGTAAGTTA TCAAAGCCAAGTAGTGCCAGCTAATATGCAACAGGTCAATTTAACATTTGCCCCAAATGGCACGGTGTACAACGCAACGG TTATTCGTGTCTATGGACGTTATCAGGCCGATGCGATTGGCCTTGATGGTGAATATGTTGAAGGTGTTAACGATACGGTG CATGAGATTCAAAAAGTTAGTCAGCATGATAAGCAAACGGCGTTCTACATTATTCACAATGAGGTGATACTACATGGCGA ATAA
Upstream 100 bases:
>100_bases AACGTTAACGATCTAGCACCTTACTATCCAGATCTCCAAGCCTGGATAGATGGCCAATCTAATACTACTCGTGGCGCTAC TGCGATTGGTTGGTGATAAT
Downstream 100 bases:
>100_bases CTATGACAAGATACCTGCCGTTAAATTCTCAATTGACGTTGACTATTTTAATCAATTATTTGAGACTGCTAGAAGGCTTG CACACAATGGTATGCCAGAG
Product: prophage Lp1 protein 44
Products: NA
Alternate protein names: Prophage Lp2 Protein
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MRYPDKVYLLTKLPDDDPNGLNHQVSYQSQVVPANMQQVNLTFAPNGTVYNATVIRVYGRYQADAIGLDGEYVEGVNDTV HEIQKVSQHDKQTAFYIIHNEVILHGE
Sequences:
>Translated_107_residues MRYPDKVYLLTKLPDDDPNGLNHQVSYQSQVVPANMQQVNLTFAPNGTVYNATVIRVYGRYQADAIGLDGEYVEGVNDTV HEIQKVSQHDKQTAFYIIHNEVILHGE >Mature_107_residues MRYPDKVYLLTKLPDDDPNGLNHQVSYQSQVVPANMQQVNLTFAPNGTVYNATVIRVYGRYQADAIGLDGEYVEGVNDTV HEIQKVSQHDKQTAFYIIHNEVILHGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12119; Mature: 12119
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYPDKVYLLTKLPDDDPNGLNHQVSYQSQVVPANMQQVNLTFAPNGTVYNATVIRVYGR CCCCCEEEEEEECCCCCCCCCCCEECCCCEECCCCCEEEEEEECCCCEEEEEEEEEEECC YQADAIGLDGEYVEGVNDTVHEIQKVSQHDKQTAFYIIHNEVILHGE CCCEEECCCCCEECCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEECC >Mature Secondary Structure MRYPDKVYLLTKLPDDDPNGLNHQVSYQSQVVPANMQQVNLTFAPNGTVYNATVIRVYGR CCCCCEEEEEEECCCCCCCCCCCEECCCCEECCCCCEEEEEEECCCCEEEEEEEEEEECC YQADAIGLDGEYVEGVNDTVHEIQKVSQHDKQTAFYIIHNEVILHGE CCCEEECCCCCEECCCCHHHHHHHHHHCCCCCEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA