Click here to switch to the map view.

The map label for this gene is 28377540

Identifier: 28377540

GI number: 28377540

Start: 614759

End: 615313

Strand: Direct

Name: 28377540

Synonym: lp_0668

Alternate gene names: NA

Gene position: 614759-615313 (Clockwise)

Preceding gene: 28377539

Following gene: 28377541

Centisome position: 18.58

GC content: 43.96

Gene sequence:

>555_bases
ATGGCGAATAACTATGACAAGATACCTGCCGTTAAATTCTCAATTGACGTTGACTATTTTAATCAATTATTTGAGACTGC
TAGAAGGCTTGCACACAATGGTATGCCAGAGGCTATAGAAGAAGCCAATAAGGAATATCAACGAGCTGTTGCACTCAGCA
AAGCATTTATCAAGAATGCTGGTGCACGCGAAAAAGAAGCTGCACAAGGCTTAGAGCGCACTCAAGTTGGACATGGTAAG
TCTGGTTACGAGCCAACGGGTACCTTGCAAGGGTCGCTAGAGATCAAGATTAGTGACGATGGTAAGTCAGTATCTGTTAT
GCCAATGGCAACAGTCGCAGATCAGAAACGGGCATTGGCAGCTATTGCTGGTAGCGGTAGTAAGAAGCCAATAACTAGTC
AAGACGGCGTTGATTACTATGGTGTCTATGTAGAATATGGCACTTATAAAATGGCTGCCGAACCATTTATGAAGCCTACG
GGTGAAAAGATTGCTACACGGCTCGAGAATGATTTTGACCGTATCATGCGTTTGGCTGTATTGGGGAGTGAGTAA

Upstream 100 bases:

>100_bases
TATGTTGAAGGTGTTAACGATACGGTGCATGAGATTCAAAAAGTTAGTCAGCATGATAAGCAAACGGCGTTCTACATTAT
TCACAATGAGGTGATACTAC

Downstream 100 bases:

>100_bases
ATGTCGCCTGAAGAAGATTTGCTATTAAGCGTGAAACAATGTCTGAGAGCATTGAACGTTCCAGTCTATGACTTCGGCCA
GCAGCGGCCAACGCAGTTTC

Product: prophage Lp1 protein 45

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MANNYDKIPAVKFSIDVDYFNQLFETARRLAHNGMPEAIEEANKEYQRAVALSKAFIKNAGAREKEAAQGLERTQVGHGK
SGYEPTGTLQGSLEIKISDDGKSVSVMPMATVADQKRALAAIAGSGSKKPITSQDGVDYYGVYVEYGTYKMAAEPFMKPT
GEKIATRLENDFDRIMRLAVLGSE

Sequences:

>Translated_184_residues
MANNYDKIPAVKFSIDVDYFNQLFETARRLAHNGMPEAIEEANKEYQRAVALSKAFIKNAGAREKEAAQGLERTQVGHGK
SGYEPTGTLQGSLEIKISDDGKSVSVMPMATVADQKRALAAIAGSGSKKPITSQDGVDYYGVYVEYGTYKMAAEPFMKPT
GEKIATRLENDFDRIMRLAVLGSE
>Mature_183_residues
ANNYDKIPAVKFSIDVDYFNQLFETARRLAHNGMPEAIEEANKEYQRAVALSKAFIKNAGAREKEAAQGLERTQVGHGKS
GYEPTGTLQGSLEIKISDDGKSVSVMPMATVADQKRALAAIAGSGSKKPITSQDGVDYYGVYVEYGTYKMAAEPFMKPTG
EKIATRLENDFDRIMRLAVLGSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20123; Mature: 19992

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANNYDKIPAVKFSIDVDYFNQLFETARRLAHNGMPEAIEEANKEYQRAVALSKAFIKNA
CCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GAREKEAAQGLERTQVGHGKSGYEPTGTLQGSLEIKISDDGKSVSVMPMATVADQKRALA
CCCHHHHHHHHHHHHCCCCCCCCCCCCEECEEEEEEECCCCCEEEEEEHHHHHHHHHHHH
AIAGSGSKKPITSQDGVDYYGVYVEYGTYKMAAEPFMKPTGEKIATRLENDFDRIMRLAV
HHHCCCCCCCCCCCCCCCEEEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGSE
HCCC
>Mature Secondary Structure 
ANNYDKIPAVKFSIDVDYFNQLFETARRLAHNGMPEAIEEANKEYQRAVALSKAFIKNA
CCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GAREKEAAQGLERTQVGHGKSGYEPTGTLQGSLEIKISDDGKSVSVMPMATVADQKRALA
CCCHHHHHHHHHHHHCCCCCCCCCCCCEECEEEEEEECCCCCEEEEEEHHHHHHHHHHHH
AIAGSGSKKPITSQDGVDYYGVYVEYGTYKMAAEPFMKPTGEKIATRLENDFDRIMRLAV
HHHCCCCCCCCCCCCCCCEEEEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGSE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA