Click here to switch to the map view.

The map label for this gene is yvpB [H]

Identifier: 28377455

GI number: 28377455

Start: 531998

End: 532852

Strand: Direct

Name: yvpB [H]

Synonym: lp_0574

Alternate gene names: 28377455

Gene position: 531998-532852 (Clockwise)

Preceding gene: 28377454

Following gene: 28377456

Centisome position: 16.08

GC content: 51.23

Gene sequence:

>855_bases
TTGATTAGAATGAGTAGATGGTGGTGGCGTATCTTGGTGGGCGGCTTGCTGGTTAGTGGCGTGGTTTACCCCGCACAAGC
GGCCGTAACGACTTATCCGATTACAGGGATTCAGGTGGTGCAGCCGCGGGTCTATCAGACGAATAGTCAGAACGGTGTCG
GTTACCATTTAACCGTCGTGCGTCATCAGCGTGCCCAATTGCGTGTTAATTTACATTTAAAGTATCACCAGCATACACAG
TGGACGCGTACTGAGCAAGCTGATATTTATCGCAACGGGCATTACCAACGCTTCTACTATGTGCATAATGGTCATCAGCA
GAGCGGCTGGATAGCTGCTAATCAGCTAAAACCCGCCAGTACGGCGTCGGTTCAACTGCGGGTACCACTGATTGACCAGC
TACCGGAGTTGCCAACGGGGTGTGAGATGACAGCGACTACCATGATGCTGCAGTATGCCGGCGTTAATATTAATAAGGAA
CAGTTTGCCAGCCACGTGCCGCGCAGTTCGAATCCTAACACTGGCTTTGTTGGCGATCCTGCTTCGGCCTATGGTATTGG
TCTCTACATCTACCCCCAAGGCTTGTTACCAACGATCCGCCACTATCTGCCGTCCGCTGTAGATCTCAGTGGGGTGGGCC
TGCAACGAATTAAAGTGCAGCTCGCTAAACGTCATCCGGTAGTCGCTTGGGTTCAGGGACTCGATGGTTTTGCGAGTCAT
ACAGTGACGCTCACTGGATATACAGCGGCAACTATTAGGTACAATGATCCTTGGCGTGGTCAATCCGGACAGATGGATAA
CCAAGCGTTTGAGACGATGTGGCAATTAAATGGTCGTCGGGCACTGAGCTATTAA

Upstream 100 bases:

>100_bases
AATTTGCCGTACCTTATTGTTTAATCTCATGATTACCAGCATTATAATGAAAACGGTTAATCTACTGATTACGATATTAA
GAGAAGGCGAGGACCAGGCA

Downstream 100 bases:

>100_bases
GAAATTGATACCATAGTTAACATTAGTTACTGTTTCATAATTTTATATTAAAAATACGCTATTTGACACACAAAATAATC
GTTTTTAATACTGTATCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MIRMSRWWWRILVGGLLVSGVVYPAQAAVTTYPITGIQVVQPRVYQTNSQNGVGYHLTVVRHQRAQLRVNLHLKYHQHTQ
WTRTEQADIYRNGHYQRFYYVHNGHQQSGWIAANQLKPASTASVQLRVPLIDQLPELPTGCEMTATTMMLQYAGVNINKE
QFASHVPRSSNPNTGFVGDPASAYGIGLYIYPQGLLPTIRHYLPSAVDLSGVGLQRIKVQLAKRHPVVAWVQGLDGFASH
TVTLTGYTAATIRYNDPWRGQSGQMDNQAFETMWQLNGRRALSY

Sequences:

>Translated_284_residues
MIRMSRWWWRILVGGLLVSGVVYPAQAAVTTYPITGIQVVQPRVYQTNSQNGVGYHLTVVRHQRAQLRVNLHLKYHQHTQ
WTRTEQADIYRNGHYQRFYYVHNGHQQSGWIAANQLKPASTASVQLRVPLIDQLPELPTGCEMTATTMMLQYAGVNINKE
QFASHVPRSSNPNTGFVGDPASAYGIGLYIYPQGLLPTIRHYLPSAVDLSGVGLQRIKVQLAKRHPVVAWVQGLDGFASH
TVTLTGYTAATIRYNDPWRGQSGQMDNQAFETMWQLNGRRALSY
>Mature_284_residues
MIRMSRWWWRILVGGLLVSGVVYPAQAAVTTYPITGIQVVQPRVYQTNSQNGVGYHLTVVRHQRAQLRVNLHLKYHQHTQ
WTRTEQADIYRNGHYQRFYYVHNGHQQSGWIAANQLKPASTASVQLRVPLIDQLPELPTGCEMTATTMMLQYAGVNINKE
QFASHVPRSSNPNTGFVGDPASAYGIGLYIYPQGLLPTIRHYLPSAVDLSGVGLQRIKVQLAKRHPVVAWVQGLDGFASH
TVTLTGYTAATIRYNDPWRGQSGQMDNQAFETMWQLNGRRALSY

Specific function: Unknown

COG id: COG4990

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016997 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32044; Mature: 32044

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRMSRWWWRILVGGLLVSGVVYPAQAAVTTYPITGIQVVQPRVYQTNSQNGVGYHLTVV
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCEEEECCCCCCCEEEEEEE
RHQRAQLRVNLHLKYHQHTQWTRTEQADIYRNGHYQRFYYVHNGHQQSGWIAANQLKPAS
EECCEEEEEEEEEEEECCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCCCEEECCCCCCC
TASVQLRVPLIDQLPELPTGCEMTATTMMLQYAGVNINKEQFASHVPRSSNPNTGFVGDP
CCEEEEEECHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCC
ASAYGIGLYIYPQGLLPTIRHYLPSAVDLSGVGLQRIKVQLAKRHPVVAWVQGLDGFASH
CCHHEEEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCC
TVTLTGYTAATIRYNDPWRGQSGQMDNQAFETMWQLNGRRALSY
EEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MIRMSRWWWRILVGGLLVSGVVYPAQAAVTTYPITGIQVVQPRVYQTNSQNGVGYHLTVV
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCEEEECCCCCCCEEEEEEE
RHQRAQLRVNLHLKYHQHTQWTRTEQADIYRNGHYQRFYYVHNGHQQSGWIAANQLKPAS
EECCEEEEEEEEEEEECCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCCCEEECCCCCCC
TASVQLRVPLIDQLPELPTGCEMTATTMMLQYAGVNINKEQFASHVPRSSNPNTGFVGDP
CCEEEEEECHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCC
ASAYGIGLYIYPQGLLPTIRHYLPSAVDLSGVGLQRIKVQLAKRHPVVAWVQGLDGFASH
CCHHEEEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCC
TVTLTGYTAATIRYNDPWRGQSGQMDNQAFETMWQLNGRRALSY
EEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]