| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is cpeB [H]
Identifier: 77747685
GI number: 77747685
Start: 1490427
End: 1492658
Strand: Reverse
Name: cpeB [H]
Synonym: PD1278
Alternate gene names: 77747685
Gene position: 1492658-1490427 (Counterclockwise)
Preceding gene: 28199165
Following gene: 28199163
Centisome position: 59.24
GC content: 53.27
Gene sequence:
>2232_bases GTGAAGTGTCCTTTCAATAAGACAGCGGTTGAAGGGACTCACAATAAAGACTGGTGGCCCAATCAGTTACGTGTGGATTT ACTGCATCAGCATTCGAATAAGTCCAATCCACTGGGTGAAACGTTCGATTACGCCAAAGAGTTCCAGAAACTCGATTACG CTGCGTTGAAGCGTGATTTACATGCATTGATGACCGATTCGCAGGATTGGTGGCCTGCTGACTTTGGTCATTACGGCGGT TTGTTTATCCGTATGGCTTGGCATAGTGCCGGCACCTATCGTATCGGTGATGGTCGTGGTGGTGCTGGCCGTGGCCAGCA GCGCTTCGCGCCGCTCAATAGCTGGCCGGATAATGTCAGCTTGGACAAGGCACGTCGTCTGCTTTGGCCGATCAAGAAAA AGTATGGTCAGCAGATTTCTTGGGCCGATCTGATTGTGCTTGCCGGTAACGTTGCGTTGGAATCAATGGGGTTTAAAACC TTTGGTTTCGCTGGTGGTCGTGTGGATACTTGGGAACCTGATCAGGATGTGTATTGGGGCAGGGAGATGACCTGGCTTGG TGGGGATGTTCGTTATGGAGCTGTCTCGGAAGGTGTACACCATCCAGATGAACACAGGGGAGCAAAGGAGAAGGCTTCCA AGAATAGCGATTCGCGTGTGTTGGAAAATCCGTTGGCTGCTGTGCAGATGGGATTGATTTATGTCAATCCTGAAGGTCCG GATGGCTGTCCAGATCCGCTCGCTTCTGCTCGCGATATTCGCGAAACGTTTGCTCGCATGGCAATGAATGATGAGGAGAC TGTGGCGTTGATCGCCGGTGGCCACACCTTCGGAAAAACACACGGCGCGGCTCCAGCAGACAACGTCGGTCCTGAGCCGG AAGCCGGGGAGTTGGAGCAGCAGGGCTTGGGGTGGCACAACCGCTTTGGTAGCGGCAAGGCGGGGGATACGATTACCAGC GGTTTGGAGGTGACATGGACTAAGACTCCAACACAATGGAGCAACGATTTTTTTGAGCACTTGTTTGGTTACGAATGGGA GTTGACCAAAAGTCCTGCCGGCGCCTATCAGTGGGTGGCTAAGGATGCTGCAGCGACGATCCCGCATGCGCACGATCCGT CGAAGAAATTACTGCCGATGATGCTGACATCGGATTTAGCGTTGCGTTTTGATCCAGTCTACGAAAAGATTTCGCGGCAT TTCCATGCGCATCCAGACCAGTTCGCCGATGCGTTTGCTCGGGCTTGGTTCAAGTTGACGCACCGTGATATGGGGCCGCG TGTCCGTTACCTTGGCCCAGAGGTTCCGGCTGAAGAATTGATTTGGCAGGACCCAGTTCCTAAGGTCAGCCATGTGTTAG TTGATGCGCAGGACCTTCTTGCGTTGAAGCATAAAATTTCTGCTTCTGGGTTAGGAATCTCGCAGCTCGTTTCGACGGCT TGGGCATCGGCCTCCACGTTCCGTGGCTCGGATAAGCGCGGCGGCGCCAATGGGGGGCGTCTTTGCTTGGCTCCGCAAAG CCAGTGGGAGGTCAATCAGCCGCAGCAACTGAGTGTGGTGCTGGAAACATTGCGGCGTGTCCAGGCTGAATTTAACGCGC AAGCGGGAGACAAACGCATTTCTTTGGCAGATTTGATTGTATTGGCTGGCGGTGTAGGCGTGGAGCAGGCGGCGAAGCGT GCCGGTATCGTGCTGGAGGTCCCTTTTGTGCCGGGACGTACCGACGCTTTGCAGGAGCAAACTGATGTCAGTTCATTTGC TCCTCTGGAGCCGTTTGCTGATGGATTCCGGAACTATGTCAAGGAAGGTTGTGTTGTTCCGTCTGAGCATCTTTTGATTG ATCGTGCCCAGTTACTGACATTGACTGCACCGGAGATGACGGTATTGATCGGCGGTTTGCGGGTCTTGGGTGCCAACGTT GGCGGTGTGAAGCACGGTGTGTTTACAGATCGTCTGGGGACGTTGAGTAACGATTTCTTTATCAATCTACTCGACATGGG GACGGAGTGGGCTCCCGTTTCCAAAGAGCGTCATTTGTTCGAAGGACGTGATCGTCGCACCGGTGCGCTGAAATGGACGG GTACCCGTGTTGATCTGGTCTTTGGCTCCAATTCACTGTTACGTGCGCTAGCAGAAGTCTATGCCGCGGTGGATGCTCAA GAGAAGTTTGTACGCGATTTTGTCGCAGCTTGGAGTAAAGTTATGCATTTGGATCGCTTTGATTTGGTGTGA
Upstream 100 bases:
>100_bases TAAATCATTATTTTTCCATACACTGTTTGTATTCCTTATTTATAAAGGTTGTCCTTATATGCGTGATATGCGTGCATCAT CTCCAGAAACGACTTCTGCC
Downstream 100 bases:
>100_bases TGATCCTGGCGTGCGCGGTGTTACATCGCGTACGCCCAACGTATCTATCCCTACTGCCCGATGATGTGCAATGACGGCCA TTGGTTGGTCTCTTTGACCA
Product: catalase/peroxidase
Products: NA
Alternate protein names: CP; Peroxidase/catalase [H]
Number of amino acids: Translated: 743; Mature: 743
Protein sequence:
>743_residues MKCPFNKTAVEGTHNKDWWPNQLRVDLLHQHSNKSNPLGETFDYAKEFQKLDYAALKRDLHALMTDSQDWWPADFGHYGG LFIRMAWHSAGTYRIGDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKKKYGQQISWADLIVLAGNVALESMGFKT FGFAGGRVDTWEPDQDVYWGREMTWLGGDVRYGAVSEGVHHPDEHRGAKEKASKNSDSRVLENPLAAVQMGLIYVNPEGP DGCPDPLASARDIRETFARMAMNDEETVALIAGGHTFGKTHGAAPADNVGPEPEAGELEQQGLGWHNRFGSGKAGDTITS GLEVTWTKTPTQWSNDFFEHLFGYEWELTKSPAGAYQWVAKDAAATIPHAHDPSKKLLPMMLTSDLALRFDPVYEKISRH FHAHPDQFADAFARAWFKLTHRDMGPRVRYLGPEVPAEELIWQDPVPKVSHVLVDAQDLLALKHKISASGLGISQLVSTA WASASTFRGSDKRGGANGGRLCLAPQSQWEVNQPQQLSVVLETLRRVQAEFNAQAGDKRISLADLIVLAGGVGVEQAAKR AGIVLEVPFVPGRTDALQEQTDVSSFAPLEPFADGFRNYVKEGCVVPSEHLLIDRAQLLTLTAPEMTVLIGGLRVLGANV GGVKHGVFTDRLGTLSNDFFINLLDMGTEWAPVSKERHLFEGRDRRTGALKWTGTRVDLVFGSNSLLRALAEVYAAVDAQ EKFVRDFVAAWSKVMHLDRFDLV
Sequences:
>Translated_743_residues MKCPFNKTAVEGTHNKDWWPNQLRVDLLHQHSNKSNPLGETFDYAKEFQKLDYAALKRDLHALMTDSQDWWPADFGHYGG LFIRMAWHSAGTYRIGDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKKKYGQQISWADLIVLAGNVALESMGFKT FGFAGGRVDTWEPDQDVYWGREMTWLGGDVRYGAVSEGVHHPDEHRGAKEKASKNSDSRVLENPLAAVQMGLIYVNPEGP DGCPDPLASARDIRETFARMAMNDEETVALIAGGHTFGKTHGAAPADNVGPEPEAGELEQQGLGWHNRFGSGKAGDTITS GLEVTWTKTPTQWSNDFFEHLFGYEWELTKSPAGAYQWVAKDAAATIPHAHDPSKKLLPMMLTSDLALRFDPVYEKISRH FHAHPDQFADAFARAWFKLTHRDMGPRVRYLGPEVPAEELIWQDPVPKVSHVLVDAQDLLALKHKISASGLGISQLVSTA WASASTFRGSDKRGGANGGRLCLAPQSQWEVNQPQQLSVVLETLRRVQAEFNAQAGDKRISLADLIVLAGGVGVEQAAKR AGIVLEVPFVPGRTDALQEQTDVSSFAPLEPFADGFRNYVKEGCVVPSEHLLIDRAQLLTLTAPEMTVLIGGLRVLGANV GGVKHGVFTDRLGTLSNDFFINLLDMGTEWAPVSKERHLFEGRDRRTGALKWTGTRVDLVFGSNSLLRALAEVYAAVDAQ EKFVRDFVAAWSKVMHLDRFDLV >Mature_743_residues MKCPFNKTAVEGTHNKDWWPNQLRVDLLHQHSNKSNPLGETFDYAKEFQKLDYAALKRDLHALMTDSQDWWPADFGHYGG LFIRMAWHSAGTYRIGDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKKKYGQQISWADLIVLAGNVALESMGFKT FGFAGGRVDTWEPDQDVYWGREMTWLGGDVRYGAVSEGVHHPDEHRGAKEKASKNSDSRVLENPLAAVQMGLIYVNPEGP DGCPDPLASARDIRETFARMAMNDEETVALIAGGHTFGKTHGAAPADNVGPEPEAGELEQQGLGWHNRFGSGKAGDTITS GLEVTWTKTPTQWSNDFFEHLFGYEWELTKSPAGAYQWVAKDAAATIPHAHDPSKKLLPMMLTSDLALRFDPVYEKISRH FHAHPDQFADAFARAWFKLTHRDMGPRVRYLGPEVPAEELIWQDPVPKVSHVLVDAQDLLALKHKISASGLGISQLVSTA WASASTFRGSDKRGGANGGRLCLAPQSQWEVNQPQQLSVVLETLRRVQAEFNAQAGDKRISLADLIVLAGGVGVEQAAKR AGIVLEVPFVPGRTDALQEQTDVSSFAPLEPFADGFRNYVKEGCVVPSEHLLIDRAQLLTLTAPEMTVLIGGLRVLGANV GGVKHGVFTDRLGTLSNDFFINLLDMGTEWAPVSKERHLFEGRDRRTGALKWTGTRVDLVFGSNSLLRALAEVYAAVDAQ EKFVRDFVAAWSKVMHLDRFDLV
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity [H]
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790378, Length=747, Percent_Identity=63.7215528781794, Blast_Score=921, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 [H]
Pfam domain/function: PF00141 peroxidase [H]
EC number: =1.11.1.6; =1.11.1.7 [H]
Molecular weight: Translated: 82173; Mature: 82173
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS00435 PEROXIDASE_1 ; PS00436 PEROXIDASE_2 ; PS50873 PEROXIDASE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCPFNKTAVEGTHNKDWWPNQLRVDLLHQHSNKSNPLGETFDYAKEFQKLDYAALKRDL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH HALMTDSQDWWPADFGHYGGLFIRMAWHSAGTYRIGDGRGGAGRGQQRFAPLNSWPDNVS HHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC LDKARRLLWPIKKKYGQQISWADLIVLAGNVALESMGFKTFGFAGGRVDTWEPDQDVYWG HHHHHHHHHHHHHHHCCCCCHHHEEEEECCHHHHHCCCCEECCCCCCCCCCCCCCCCCCC REMTWLGGDVRYGAVSEGVHHPDEHRGAKEKASKNSDSRVLENPLAAVQMGLIYVNPEGP CEEEEECCCEEECCHHCCCCCCHHHCCCHHHHCCCCCHHHHHHHHHHEEEEEEEECCCCC DGCPDPLASARDIRETFARMAMNDEETVALIAGGHTFGKTHGAAPADNVGPEPEAGELEQ CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHH QGLGWHNRFGSGKAGDTITSGLEVTWTKTPTQWSNDFFEHLFGYEWELTKSPAGAYQWVA HCCCHHHCCCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHH KDAAATIPHAHDPSKKLLPMMLTSDLALRFDPVYEKISRHFHAHPDQFADAFARAWFKLT HHHHHCCCCCCCCCHHHHHHHHHCCHHHEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHH HRDMGPRVRYLGPEVPAEELIWQDPVPKVSHVLVDAQDLLALKHKISASGLGISQLVSTA HHCCCCCEEECCCCCCHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHH WASASTFRGSDKRGGANGGRLCLAPQSQWEVNQPQQLSVVLETLRRVQAEFNAQAGDKRI HHCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE SLADLIVLAGGVGVEQAAKRAGIVLEVPFVPGRTDALQEQTDVSSFAPLEPFADGFRNYV HHHHHHHHCCCCCHHHHHHHCCEEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHH KEGCVVPSEHLLIDRAQLLTLTAPEMTVLIGGLRVLGANVGGVKHGVFTDRLGTLSNDFF HCCCCCCCHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCE INLLDMGTEWAPVSKERHLFEGRDRRTGALKWTGTRVDLVFGSNSLLRALAEVYAAVDAQ EEEECCCCCCCCCCCHHHHHCCCCCCCCCEEECCCEEEEEECCCHHHHHHHHHHHHHHHH EKFVRDFVAAWSKVMHLDRFDLV HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKCPFNKTAVEGTHNKDWWPNQLRVDLLHQHSNKSNPLGETFDYAKEFQKLDYAALKRDL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH HALMTDSQDWWPADFGHYGGLFIRMAWHSAGTYRIGDGRGGAGRGQQRFAPLNSWPDNVS HHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC LDKARRLLWPIKKKYGQQISWADLIVLAGNVALESMGFKTFGFAGGRVDTWEPDQDVYWG HHHHHHHHHHHHHHHCCCCCHHHEEEEECCHHHHHCCCCEECCCCCCCCCCCCCCCCCCC REMTWLGGDVRYGAVSEGVHHPDEHRGAKEKASKNSDSRVLENPLAAVQMGLIYVNPEGP CEEEEECCCEEECCHHCCCCCCHHHCCCHHHHCCCCCHHHHHHHHHHEEEEEEEECCCCC DGCPDPLASARDIRETFARMAMNDEETVALIAGGHTFGKTHGAAPADNVGPEPEAGELEQ CCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHH QGLGWHNRFGSGKAGDTITSGLEVTWTKTPTQWSNDFFEHLFGYEWELTKSPAGAYQWVA HCCCHHHCCCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHH KDAAATIPHAHDPSKKLLPMMLTSDLALRFDPVYEKISRHFHAHPDQFADAFARAWFKLT HHHHHCCCCCCCCCHHHHHHHHHCCHHHEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHH HRDMGPRVRYLGPEVPAEELIWQDPVPKVSHVLVDAQDLLALKHKISASGLGISQLVSTA HHCCCCCEEECCCCCCHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHH WASASTFRGSDKRGGANGGRLCLAPQSQWEVNQPQQLSVVLETLRRVQAEFNAQAGDKRI HHCCHHCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE SLADLIVLAGGVGVEQAAKRAGIVLEVPFVPGRTDALQEQTDVSSFAPLEPFADGFRNYV HHHHHHHHCCCCCHHHHHHHCCEEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHH KEGCVVPSEHLLIDRAQLLTLTAPEMTVLIGGLRVLGANVGGVKHGVFTDRLGTLSNDFF HCCCCCCCHHHHHHHHHEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCE INLLDMGTEWAPVSKERHLFEGRDRRTGALKWTGTRVDLVFGSNSLLRALAEVYAAVDAQ EEEECCCCCCCCCCCHHHHHCCCCCCCCCEEECCCEEEEEECCCHHHHHHHHHHHHHHHH EKFVRDFVAAWSKVMHLDRFDLV HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]