Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is thrA [H]
Identifier: 28199159
GI number: 28199159
Start: 1483149
End: 1485635
Strand: Reverse
Name: thrA [H]
Synonym: PD1273
Alternate gene names: 28199159
Gene position: 1485635-1483149 (Counterclockwise)
Preceding gene: 28199160
Following gene: 28199158
Centisome position: 58.96
GC content: 56.74
Gene sequence:
>2487_bases TTGTCCACCGTTGAAACTCCTGTCTACGTTCCGCGTACCGTCGTTCACAAATTCGGTGGGACTTCGGTTGCCGATGCGGA TTGCTATCGCCATGTCACGCGTCTCCTATTAGCACGCGAAGAGACTGTGCAGGTCACCATCGTTTCTGCGATGAAAGGGG TGACTGATACGTTGATTGCACTGGCCGAACAGGCAGCCAATCATTCTCCCGACTGGCAGGTGTTGTGGCAGCAAACCCGC ACGCGTCATTGCGACGCCGCTCAGGCATTGCTTGGAGAGCATGCCGCTACGCTGCAAGATTGGTTGAATACCCGTTTTAA TGAACTGCATGAAATGCTGGTGGCCTTGTCCGTCATCGGGATGCTTCCATCTGAAGTGCTGGACCGCTTACAAGGCTTGG GCGAGGTCTACTCCGCACAGTTGCTTGGGCATTATTTGCAATCCCAGGGTGAGGATTGTGTCGTTCTGGATGCCCGCCAA GTCCTTGTGGTGAGTCCTGGTGAGTTTGGCGCCGAAGTCGATTGGGCAACCAGTGCCCAGCACTTGGCCCATTGGCGTAT GCAGCATCCACAGCGGCGTGTGGTGGTCACCGGTTTCGTTGCCTCTGATCGTACTGGACGCGCCATCACCCTGGGTCGCA ACGGCAGTGATTATTCCGGTGCCATCTTCGCGGCGTTGTTTGAGGCCGATGAGCTTCACATCTGGACAGATGTTGATGGA GTCATGTCCGCCGACCCCCGGGTCGTCCCGGATGCGGTGCAACTGGATGCCTTGAGTTACGACGAAGCATGTGAATTGGC CTATTTCGGCGCCAAGGTAGTGCATCCACAAACCATGTCGCCGGTGATGAAACGCGGAGTGCCGATCATCATTCGAAACA CCTTCCAACCCGGACATCCAGGGACTCGGATCACCGCTGATAGCGTGGTGAGTGGATCTGTTAAAGGCCTGACCCTGAGT CCAGGACTGGCCGTGCTGAACCTGGAAGGCACGGGGCTGATCGGAGTCCCTGGTACCGCTGAACGCGTGTTTGCCGCCCT GCGTAATGCACGTTTGTCTGTCGTGATGATCTCACAGGGATCTTCGGAGCATTCCATTTGCTGCCTCGTGCACCAAACCG AGGCCGAGCGTGCACGTGATGCGTTGTTGTATGCCTTTGCCCATGAATTGGCCATAGGGCATGTCCAGCGCGTACAACTG ACCAACAATATCAGCGTATTGGCGGCGGTTGGCGACGGCATGGCTGGTCACCTGGGTGTAGCGGCGCGCTTGTTTGAATC CTTAAGGCGCGCCCATGTCAACATCCTGGCCATTGCCCAGGGGTCTTCAGAGCGCAATATTTCGGTGGCAATCGACAGTC AGCAGGCGACGAAGGCACTGCGCGCTGCACACGCTGCTTTCTGGTTATCACCCCAGACATTTTCGATTGGTGTGATTGGT CCGGGTCACGTTGGTGAGGCCCTGTTGGACCAGCTATGTGCTGCACAGCAGCAATTACTGTCCAAGGCAAATCTGGATCT GCGTTTGCGTGCGATCGTTTCACGGCGGCGTATGTTATTGGATGAGCGTGGCCTGGGGAGTGACTGGCGCCACGCCTTCG CCGCCGCACCAGAGGCGGTCGATCTGGATGCCTTTACCGCACACTTACAGGCCGCCCATCTGCCTCATGCAGTCATCATT GACTGTAGCGGCAGTGCTGAGGTGGCTGATCGCTATGCCGACTGGCTGGCAGCCGGTATCCATGTCGTGACACCGAATAA ACAGGCTGGCTCCGGCCCCCTGCATCGCTACCACGCGATTCGTGCAGCAGCAGATGCCAGCGGCGCACGCTTTCGCTATG AAGCCACAGTGGGCGCAGGCTTACCGGTGATTACGACATTGCGTGACTTGATGGATACCGGTGATAGCGTCACCTCAATC GAAGGGATCTTTTCCGGAACTCTGGCGTGGCTATTCAATAAATATGATGGCAGCGTCCCATTCTCCCAATTAATCGCCCA GGCGCGAGCGATGGGATATACCGAGCCGGATCCACGCGATGACCTGTCTGGGGTTGACGTGGCGCGTAAGCTGGTGATTC TGGCGCGCGATGCGGGGCGTGATATCAGCCTAGAAGATGTTGCGGTAGAAAGCCTGGTGCCGGAGACATTGTGTCAACTC AGCGTTGCCGATTTCATGGAACGACTCAATGAAATTGATGCCACCTTTGCAGAGCGTTTGGCTGCGGCCAAACAGCGCGG TTGCGTATTGCGTTACGTCGCACAACTGTCCCCTGGACACGTCCCTAGTGTCAGCTTGATTGAATTGCCTTCTGACCATG CCTTCGTCAATCTTCGTTTGACCGATAACGTAGTGCAATTTACAACTCGTCGTTATTCCGAAAACCCCTTGATCGTACAG GGCCCTGGCGCCGGTCCAGAGGTCACCGCAGCCGGTGTTTTTGCGGATTTACTGCGAGTTGCAGCGGGCGAGGGCGCACG CTTGTGA
Upstream 100 bases:
>100_bases AGGCCCCGCACCAGAACTCCAGGTTGCGGGTCAAACCCTCAGCCTGATGAGAATGGGGCCTCCATCATGAGGTCTGTTGA TGTCATCGTCTGCTGTCCGG
Downstream 100 bases:
>100_bases ATCGGACCTTGCAACCAGACAGCGGCGCATCTCAAACAGCGCCCACAGCGCATCAGGCACGCGCCTTCGCACCGGCATCA GTGGCGAACGTTGCCGTTGG
Product: bifunctional aspartokinase I/homeserine dehydrogenase I
Products: NA
Alternate protein names: Aspartokinase I/homoserine dehydrogenase I; AKI-HDI; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 828; Mature: 827
Protein sequence:
>828_residues MSTVETPVYVPRTVVHKFGGTSVADADCYRHVTRLLLAREETVQVTIVSAMKGVTDTLIALAEQAANHSPDWQVLWQQTR TRHCDAAQALLGEHAATLQDWLNTRFNELHEMLVALSVIGMLPSEVLDRLQGLGEVYSAQLLGHYLQSQGEDCVVLDARQ VLVVSPGEFGAEVDWATSAQHLAHWRMQHPQRRVVVTGFVASDRTGRAITLGRNGSDYSGAIFAALFEADELHIWTDVDG VMSADPRVVPDAVQLDALSYDEACELAYFGAKVVHPQTMSPVMKRGVPIIIRNTFQPGHPGTRITADSVVSGSVKGLTLS PGLAVLNLEGTGLIGVPGTAERVFAALRNARLSVVMISQGSSEHSICCLVHQTEAERARDALLYAFAHELAIGHVQRVQL TNNISVLAAVGDGMAGHLGVAARLFESLRRAHVNILAIAQGSSERNISVAIDSQQATKALRAAHAAFWLSPQTFSIGVIG PGHVGEALLDQLCAAQQQLLSKANLDLRLRAIVSRRRMLLDERGLGSDWRHAFAAAPEAVDLDAFTAHLQAAHLPHAVII DCSGSAEVADRYADWLAAGIHVVTPNKQAGSGPLHRYHAIRAAADASGARFRYEATVGAGLPVITTLRDLMDTGDSVTSI EGIFSGTLAWLFNKYDGSVPFSQLIAQARAMGYTEPDPRDDLSGVDVARKLVILARDAGRDISLEDVAVESLVPETLCQL SVADFMERLNEIDATFAERLAAAKQRGCVLRYVAQLSPGHVPSVSLIELPSDHAFVNLRLTDNVVQFTTRRYSENPLIVQ GPGAGPEVTAAGVFADLLRVAAGEGARL
Sequences:
>Translated_828_residues MSTVETPVYVPRTVVHKFGGTSVADADCYRHVTRLLLAREETVQVTIVSAMKGVTDTLIALAEQAANHSPDWQVLWQQTR TRHCDAAQALLGEHAATLQDWLNTRFNELHEMLVALSVIGMLPSEVLDRLQGLGEVYSAQLLGHYLQSQGEDCVVLDARQ VLVVSPGEFGAEVDWATSAQHLAHWRMQHPQRRVVVTGFVASDRTGRAITLGRNGSDYSGAIFAALFEADELHIWTDVDG VMSADPRVVPDAVQLDALSYDEACELAYFGAKVVHPQTMSPVMKRGVPIIIRNTFQPGHPGTRITADSVVSGSVKGLTLS PGLAVLNLEGTGLIGVPGTAERVFAALRNARLSVVMISQGSSEHSICCLVHQTEAERARDALLYAFAHELAIGHVQRVQL TNNISVLAAVGDGMAGHLGVAARLFESLRRAHVNILAIAQGSSERNISVAIDSQQATKALRAAHAAFWLSPQTFSIGVIG PGHVGEALLDQLCAAQQQLLSKANLDLRLRAIVSRRRMLLDERGLGSDWRHAFAAAPEAVDLDAFTAHLQAAHLPHAVII DCSGSAEVADRYADWLAAGIHVVTPNKQAGSGPLHRYHAIRAAADASGARFRYEATVGAGLPVITTLRDLMDTGDSVTSI EGIFSGTLAWLFNKYDGSVPFSQLIAQARAMGYTEPDPRDDLSGVDVARKLVILARDAGRDISLEDVAVESLVPETLCQL SVADFMERLNEIDATFAERLAAAKQRGCVLRYVAQLSPGHVPSVSLIELPSDHAFVNLRLTDNVVQFTTRRYSENPLIVQ GPGAGPEVTAAGVFADLLRVAAGEGARL >Mature_827_residues STVETPVYVPRTVVHKFGGTSVADADCYRHVTRLLLAREETVQVTIVSAMKGVTDTLIALAEQAANHSPDWQVLWQQTRT RHCDAAQALLGEHAATLQDWLNTRFNELHEMLVALSVIGMLPSEVLDRLQGLGEVYSAQLLGHYLQSQGEDCVVLDARQV LVVSPGEFGAEVDWATSAQHLAHWRMQHPQRRVVVTGFVASDRTGRAITLGRNGSDYSGAIFAALFEADELHIWTDVDGV MSADPRVVPDAVQLDALSYDEACELAYFGAKVVHPQTMSPVMKRGVPIIIRNTFQPGHPGTRITADSVVSGSVKGLTLSP GLAVLNLEGTGLIGVPGTAERVFAALRNARLSVVMISQGSSEHSICCLVHQTEAERARDALLYAFAHELAIGHVQRVQLT NNISVLAAVGDGMAGHLGVAARLFESLRRAHVNILAIAQGSSERNISVAIDSQQATKALRAAHAAFWLSPQTFSIGVIGP GHVGEALLDQLCAAQQQLLSKANLDLRLRAIVSRRRMLLDERGLGSDWRHAFAAAPEAVDLDAFTAHLQAAHLPHAVIID CSGSAEVADRYADWLAAGIHVVTPNKQAGSGPLHRYHAIRAAADASGARFRYEATVGAGLPVITTLRDLMDTGDSVTSIE GIFSGTLAWLFNKYDGSVPFSQLIAQARAMGYTEPDPRDDLSGVDVARKLVILARDAGRDISLEDVAVESLVPETLCQLS VADFMERLNEIDATFAERLAAAKQRGCVLRYVAQLSPGHVPSVSLIELPSDHAFVNLRLTDNVVQFTTRRYSENPLIVQG PGAGPEVTAAGVFADLLRVAAGEGARL
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=818, Percent_Identity=40.2200488997555, Blast_Score=564, Evalue=1e-162, Organism=Escherichia coli, GI1790376, Length=820, Percent_Identity=34.1463414634146, Blast_Score=404, Evalue=1e-113, Organism=Escherichia coli, GI1790455, Length=464, Percent_Identity=29.0948275862069, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6322599, Length=367, Percent_Identity=38.6920980926431, Blast_Score=221, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6320893, Length=502, Percent_Identity=27.4900398406374, Blast_Score=157, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 89057; Mature: 88926
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS01042 HOMOSER_DHGENASE ; PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVETPVYVPRTVVHKFGGTSVADADCYRHVTRLLLAREETVQVTIVSAMKGVTDTLIA CCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHH LAEQAANHSPDWQVLWQQTRTRHCDAAQALLGEHAATLQDWLNTRFNELHEMLVALSVIG HHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLPSEVLDRLQGLGEVYSAQLLGHYLQSQGEDCVVLDARQVLVVSPGEFGAEVDWATSAQ CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCCCCHHHH HLAHWRMQHPQRRVVVTGFVASDRTGRAITLGRNGSDYSGAIFAALFEADELHIWTDVDG HHHHHHHCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHEECCCCEEEEECCCC VMSADPRVVPDAVQLDALSYDEACELAYFGAKVVHPQTMSPVMKRGVPIIIRNTFQPGHP HHCCCCCCCCCHHHCCCCCCCHHHHHHHHCCEEECCCHHHHHHHCCCCEEEECCCCCCCC GTRITADSVVSGSVKGLTLSPGLAVLNLEGTGLIGVPGTAERVFAALRNARLSVVMISQG CCEEEHHHHHCCCCCCEEECCCEEEEEECCCEEEECCCHHHHHHHHHHCCCEEEEEEECC SSEHSICCLVHQTEAERARDALLYAFAHELAIGHVQRVQLTNNISVLAAVGDGMAGHLGV CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCCCHHHHH AARLFESLRRAHVNILAIAQGSSERNISVAIDSQQATKALRAAHAAFWLSPQTFSIGVIG HHHHHHHHHHCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHEEECCCEEEEEECC PGHVGEALLDQLCAAQQQLLSKANLDLRLRAIVSRRRMLLDERGLGSDWRHAFAAAPEAV CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC DLDAFTAHLQAAHLPHAVIIDCSGSAEVADRYADWLAAGIHVVTPNKQAGSGPLHRYHAI CHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHH RAAADASGARFRYEATVGAGLPVITTLRDLMDTGDSVTSIEGIFSGTLAWLFNKYDGSVP HHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC FSQLIAQARAMGYTEPDPRDDLSGVDVARKLVILARDAGRDISLEDVAVESLVPETLCQL HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHH SVADFMERLNEIDATFAERLAAAKQRGCVLRYVAQLSPGHVPSVSLIELPSDHAFVNLRL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEE TDNVVQFTTRRYSENPLIVQGPGAGPEVTAAGVFADLLRVAAGEGARL ECHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure STVETPVYVPRTVVHKFGGTSVADADCYRHVTRLLLAREETVQVTIVSAMKGVTDTLIA CCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHH LAEQAANHSPDWQVLWQQTRTRHCDAAQALLGEHAATLQDWLNTRFNELHEMLVALSVIG HHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLPSEVLDRLQGLGEVYSAQLLGHYLQSQGEDCVVLDARQVLVVSPGEFGAEVDWATSAQ CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCCCCHHHH HLAHWRMQHPQRRVVVTGFVASDRTGRAITLGRNGSDYSGAIFAALFEADELHIWTDVDG HHHHHHHCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCHHHHHEECCCCEEEEECCCC VMSADPRVVPDAVQLDALSYDEACELAYFGAKVVHPQTMSPVMKRGVPIIIRNTFQPGHP HHCCCCCCCCCHHHCCCCCCCHHHHHHHHCCEEECCCHHHHHHHCCCCEEEECCCCCCCC GTRITADSVVSGSVKGLTLSPGLAVLNLEGTGLIGVPGTAERVFAALRNARLSVVMISQG CCEEEHHHHHCCCCCCEEECCCEEEEEECCCEEEECCCHHHHHHHHHHCCCEEEEEEECC SSEHSICCLVHQTEAERARDALLYAFAHELAIGHVQRVQLTNNISVLAAVGDGMAGHLGV CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEECCCCCHHHHH AARLFESLRRAHVNILAIAQGSSERNISVAIDSQQATKALRAAHAAFWLSPQTFSIGVIG HHHHHHHHHHCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHEEECCCEEEEEECC PGHVGEALLDQLCAAQQQLLSKANLDLRLRAIVSRRRMLLDERGLGSDWRHAFAAAPEAV CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC DLDAFTAHLQAAHLPHAVIIDCSGSAEVADRYADWLAAGIHVVTPNKQAGSGPLHRYHAI CHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHH RAAADASGARFRYEATVGAGLPVITTLRDLMDTGDSVTSIEGIFSGTLAWLFNKYDGSVP HHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC FSQLIAQARAMGYTEPDPRDDLSGVDVARKLVILARDAGRDISLEDVAVESLVPETLCQL HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHH SVADFMERLNEIDATFAERLAAAKQRGCVLRYVAQLSPGHVPSVSLIELPSDHAFVNLRL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEE TDNVVQFTTRRYSENPLIVQGPGAGPEVTAAGVFADLLRVAAGEGARL ECHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7003595; 1630901; 7610040; 9278503; 6277952; 2410621; 387092; 6298218; 390305 [H]