Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is 28199131
Identifier: 28199131
GI number: 28199131
Start: 1446395
End: 1446631
Strand: Reverse
Name: 28199131
Synonym: PD1244
Alternate gene names: NA
Gene position: 1446631-1446395 (Counterclockwise)
Preceding gene: 28199132
Following gene: 28199130
Centisome position: 57.41
GC content: 38.4
Gene sequence:
>237_bases GTGTTAACCGATAAAGAAATCAGACAATATGCGGAGACATGGGCACAAGGTGCGCCTTTTAAAGAGACGAGTAAAAAAGG GGTTTATGTGGCTTATGCGAGTGATGGAACCAAGGTGACATTGAGGTCTGTTTCTTCTTCAGATCAAGTAACTAAAGCGA GATGGACGATTGATATAGAAAATAATCCTAAGTTGAGAGAAGTTACAGATCAAAGAGTTGAATTTAAATTTAGGTGA
Upstream 100 bases:
>100_bases ATTTATTATTTCAAAGAGGGAGTTCGACCCCTTACCGTATGACCCTAAAGTTCCAGGAGGAAGTAATAAAAGTGGGACGA CCAAGGTATTTCCATCAGAA
Downstream 100 bases:
>100_bases TAGGTGATTTTATGTTAACGCAACAGCAGGTAGATCATATTTATGAGATGTTAGGTGGGCCTTTGAGTTTTCTTTGGGGT TATATAGGAGATGCGCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MLTDKEIRQYAETWAQGAPFKETSKKGVYVAYASDGTKVTLRSVSSSDQVTKARWTIDIENNPKLREVTDQRVEFKFR
Sequences:
>Translated_78_residues MLTDKEIRQYAETWAQGAPFKETSKKGVYVAYASDGTKVTLRSVSSSDQVTKARWTIDIENNPKLREVTDQRVEFKFR >Mature_78_residues MLTDKEIRQYAETWAQGAPFKETSKKGVYVAYASDGTKVTLRSVSSSDQVTKARWTIDIENNPKLREVTDQRVEFKFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9002; Mature: 9002
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTDKEIRQYAETWAQGAPFKETSKKGVYVAYASDGTKVTLRSVSSSDQVTKARWTIDIE CCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEEEEC NNPKLREVTDQRVEFKFR CCCCHHCCCCCCEEEEEC >Mature Secondary Structure MLTDKEIRQYAETWAQGAPFKETSKKGVYVAYASDGTKVTLRSVSSSDQVTKARWTIDIE CCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEEEEC NNPKLREVTDQRVEFKFR CCCCHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA