Definition Xylella fastidiosa Temecula1, complete genome.
Accession NC_004556
Length 2,519,802

Click here to switch to the map view.

The map label for this gene is 28199132

Identifier: 28199132

GI number: 28199132

Start: 1446899

End: 1447312

Strand: Reverse

Name: 28199132

Synonym: PD1245

Alternate gene names: NA

Gene position: 1447312-1446899 (Counterclockwise)

Preceding gene: 28199134

Following gene: 28199131

Centisome position: 57.44

GC content: 37.2

Gene sequence:

>414_bases
TTGAAATTAAATTCAGGTGATGACATGTTAACGCAAGAGCAGATAGATTTTATTTATGAGGATTTAGGTGGGGGGTTTCA
TCATTTCTGGGATTATGTAAAGGAGGTGCATGAAATTTCTTCTTCGCAAGTGGATCCGGATTCATTTGAGGAAATAAAGA
ACGAGTTCTTCTTTGTAATGGGGAAATTATTGGATCAGGGAAAACTCAAGCTTGGTAATAGAAAGACCGAGCTTATTATG
GAGGGGACTACTGAAGAATTGGTAGATATGTTTAGAAGATCTTTTCCTAGTTATATTTCGCATGAAGATCTTGACACAGG
ACTTTGGTTTTTTGCAGATTGTCCATTTATAGCGGTATGGGTGCATAAAGGACAAGGAGAAAATGGTGAGGATTATTACG
GGTGGTGTTTTTAA

Upstream 100 bases:

>100_bases
CATTTGAGGTCGGTTTCGTCTTCATATGAAGATACTAAAGCAAGATGGACGCTTGTTATAGAAAATAATCCCTCTTTGAA
GGAAATTGTAAATCGAAAAG

Downstream 100 bases:

>100_bases
TGATGCGTGACTAACCTCACTCCCTGTTGCGATGATTTATTTAGATACACGGGTGCGATGTTCCGAAGGCAGCTGCACCC
GCGTTTGTGTGACTACCACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKLNSGDDMLTQEQIDFIYEDLGGGFHHFWDYVKEVHEISSSQVDPDSFEEIKNEFFFVMGKLLDQGKLKLGNRKTELIM
EGTTEELVDMFRRSFPSYISHEDLDTGLWFFADCPFIAVWVHKGQGENGEDYYGWCF

Sequences:

>Translated_137_residues
MKLNSGDDMLTQEQIDFIYEDLGGGFHHFWDYVKEVHEISSSQVDPDSFEEIKNEFFFVMGKLLDQGKLKLGNRKTELIM
EGTTEELVDMFRRSFPSYISHEDLDTGLWFFADCPFIAVWVHKGQGENGEDYYGWCF
>Mature_137_residues
MKLNSGDDMLTQEQIDFIYEDLGGGFHHFWDYVKEVHEISSSQVDPDSFEEIKNEFFFVMGKLLDQGKLKLGNRKTELIM
EGTTEELVDMFRRSFPSYISHEDLDTGLWFFADCPFIAVWVHKGQGENGEDYYGWCF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16043; Mature: 16043

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNSGDDMLTQEQIDFIYEDLGGGFHHFWDYVKEVHEISSSQVDPDSFEEIKNEFFFVM
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GKLLDQGKLKLGNRKTELIMEGTTEELVDMFRRSFPSYISHEDLDTGLWFFADCPFIAVW
HHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCHHCCCCCCCCCHHEEECCCEEEEE
VHKGQGENGEDYYGWCF
EECCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLNSGDDMLTQEQIDFIYEDLGGGFHHFWDYVKEVHEISSSQVDPDSFEEIKNEFFFVM
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GKLLDQGKLKLGNRKTELIMEGTTEELVDMFRRSFPSYISHEDLDTGLWFFADCPFIAVW
HHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCHHCCCCCCCCCHHEEECCCEEEEE
VHKGQGENGEDYYGWCF
EECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA