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The map label for this gene is yihS [H]

Identifier: 28199052

GI number: 28199052

Start: 1364210

End: 1365415

Strand: Reverse

Name: yihS [H]

Synonym: PD1162

Alternate gene names: 28199052

Gene position: 1365415-1364210 (Counterclockwise)

Preceding gene: 28199053

Following gene: 28199050

Centisome position: 54.19

GC content: 51.74

Gene sequence:

>1206_bases
ATGACTCCATTACCTGCAACTCCTGTTCCGGATTTCCGTTCAGCGGATTTCCTGCGTACACATATCAGCGACACCATGGC
GTTTTATCATCCTCGCTGTATCGATTCGGCGGGTGGTTTTTTCCACTATTTCCGCGACGATGGCAGTATCTACAATGCTA
CTCATCGCCATTTGGTCAGTAGTACGCGTTTCGTTTTCAATTACGCGATGGCTTATCTGCAATTTGGCACCGCAGAGTAT
CTAGATGCCGTTCATCATGGTTTGAGTTATGTGCGCGATGTGCATCGCAATCCAGCCACTGGTGGTTATGCTTGGACGCT
TTGTGATGATCGTGTTGAAGATGATACCAATCATTGCTACGGGCTAGCGTTCGTGATGTTGGCGTATTCATGCGGGCTGA
AAGTGGGGATTAAGCAGGCGCGGGAATGGATGGATGAAACGTGGTGCTTGCTGGAACGGCATTTTTGGGATGCTGAGTAT
GGCCTGTACAAGGATGAGGCCGATGCGCAGTGGAATTTCACGCGCTATCGCGGACAGAATGCCAACATGCATATGTGCGA
GGCGATGTTGGCGGCCTATGAGGCCAGCGGTGAGCAGCGTTATTTGGAGCGTGCGCTAGTGCTCGCTGATCGTATCACCC
GTCGTCAGGCCGCTAAAGCAGATGGCTTGGTGTGGGAGCATTACGATATGCGCTGGGAAGTCGATTGGGATTATAACCGT
GACAATCCCAAGCATTTATTCCGACCCTGGGGCTTCCAGCCAGGACACCAGACCGAATGGGCTAAGTTGTTGTTGATTTT
GGATCGTTATATTGAGGTTGAATGGTTGGTTCCGGTTGCGCGTTCCTTATTCGATGTTGCCGTAGCGCGTTCGTGGGATG
CTGTACGTGGAGGCTTATGCTATGGGTTTGCTCCAGACGGTACGATCTGCGATGACGATAAGTATTTTTGGGTGCAGGCT
GAGTCGTTAGCTGCTGCTGCGTTGCTGGCTACACGTAGCGGTGACGAGCGTTATTGGCAGTGGTACGACAGGTTGTGGGC
GTATGCTTGGCAGCACATGGTTGATCATCGCTACGGTGCTTGGTACCGCCTCCTTGATGGTGACAATCGCAAGTACAACG
ATGAGAAGAGTCCGGCTGGCAAGACCGATTATCACACTATGGGGGCTTGTCATGAGGTGCTCAATGTTGTCTGGACGAAG
TCGTAG

Upstream 100 bases:

>100_bases
GTTTTGCTGCTGCAGTGGGTGCGCTTGCCGTGACGCGTCAAGGGGCTTTCACTGCTATGCCGATGCTTTCTGAGGTTCTT
TCTTTGATTCAAGAGCAATC

Downstream 100 bases:

>100_bases
CGACATGCCGCAAAAGGGCGGATTGCCGTGAAGATGGGATCGCTATAACTTATAGAGTGTTAAGAGTTTTTATATCGGCG
TGCTATGAGTTCTAGCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MTPLPATPVPDFRSADFLRTHISDTMAFYHPRCIDSAGGFFHYFRDDGSIYNATHRHLVSSTRFVFNYAMAYLQFGTAEY
LDAVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSCGLKVGIKQAREWMDETWCLLERHFWDAEY
GLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNR
DNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVARSWDAVRGGLCYGFAPDGTICDDDKYFWVQA
ESLAAAALLATRSGDERYWQWYDRLWAYAWQHMVDHRYGAWYRLLDGDNRKYNDEKSPAGKTDYHTMGACHEVLNVVWTK
S

Sequences:

>Translated_401_residues
MTPLPATPVPDFRSADFLRTHISDTMAFYHPRCIDSAGGFFHYFRDDGSIYNATHRHLVSSTRFVFNYAMAYLQFGTAEY
LDAVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSCGLKVGIKQAREWMDETWCLLERHFWDAEY
GLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNR
DNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVARSWDAVRGGLCYGFAPDGTICDDDKYFWVQA
ESLAAAALLATRSGDERYWQWYDRLWAYAWQHMVDHRYGAWYRLLDGDNRKYNDEKSPAGKTDYHTMGACHEVLNVVWTK
S
>Mature_400_residues
TPLPATPVPDFRSADFLRTHISDTMAFYHPRCIDSAGGFFHYFRDDGSIYNATHRHLVSSTRFVFNYAMAYLQFGTAEYL
DAVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSCGLKVGIKQAREWMDETWCLLERHFWDAEYG
LYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRD
NPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVARSWDAVRGGLCYGFAPDGTICDDDKYFWVQAE
SLAAAALLATRSGDERYWQWYDRLWAYAWQHMVDHRYGAWYRLLDGDNRKYNDEKSPAGKTDYHTMGACHEVLNVVWTKS

Specific function: Unknown

COG id: COG2942

COG function: function code G; N-acyl-D-glucosamine 2-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]

Homologues:

Organism=Escherichia coli, GI87082342, Length=359, Percent_Identity=30.3621169916435, Blast_Score=162, Evalue=5e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819 [H]

Pfam domain/function: PF07221 GlcNAc_2-epim [H]

EC number: 5.-.-.- [C]

Molecular weight: Translated: 46926; Mature: 46795

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLPATPVPDFRSADFLRTHISDTMAFYHPRCIDSAGGFFHYFRDDGSIYNATHRHLVS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCEEHHHHHHHHH
STRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCY
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHH
GLAFVMLAYSCGLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRGQN
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCC
ANMHMCEAMLAAYEASGEQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNR
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCC
DNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVARSWDAVRGGLC
CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEE
YGFAPDGTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRLWAYAWQHMVDHRYGA
EEECCCCCEECCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
WYRLLDGDNRKYNDEKSPAGKTDYHTMGACHEVLNVVWTKS
EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPLPATPVPDFRSADFLRTHISDTMAFYHPRCIDSAGGFFHYFRDDGSIYNATHRHLVS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCEEEEECCCCCEEHHHHHHHHH
STRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCY
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHH
GLAFVMLAYSCGLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRGQN
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCC
ANMHMCEAMLAAYEASGEQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNR
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCC
DNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVARSWDAVRGGLC
CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEE
YGFAPDGTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRLWAYAWQHMVDHRYGA
EEECCCCCEECCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
WYRLLDGDNRKYNDEKSPAGKTDYHTMGACHEVLNVVWTKS
EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]