Click here to switch to the map view.

The map label for this gene is 28199009

Identifier: 28199009

GI number: 28199009

Start: 1313407

End: 1313793

Strand: Reverse

Name: 28199009

Synonym: PD1117

Alternate gene names: NA

Gene position: 1313793-1313407 (Counterclockwise)

Preceding gene: 28199010

Following gene: 28199008

Centisome position: 52.14

GC content: 56.07

Gene sequence:

>387_bases
ATGACGCAGTTACCTGCTGCCGTGTGTTTTTCCGGCAAATCCCTTCCCACTATTGATCGTGATGGTGTTCCTCACCTGAC
GGCTGCCGATCTGGCCCGCGCTTTGGGCTACAAAGACACCGTGAGCTTGACCACTGTACGCCGCTGCGGTACCGTCGCTA
GTAAGGAGATCAAAAACTCCGGAAGTAGCGGTAACCGCACCCGAAACCCATGCGGTTTTTTTACGCCTGCACGTTTTTAC
GTCGGGAGGGCGGCAGCCATACAACACCCTGTAAAGGGGAAAGCTGCCCGCCGTCTACTTCCGGTTTTTGACCTCCCGAC
ACCTACGGGTGCGGCGCGCAAAAACGTCTCCCCGTGGTCATCCCATGAAGTAGGAGACGTTTTATGA

Upstream 100 bases:

>100_bases
CCGCCGTCTTTGTCCGGTTTCTTAGCCTCCCGACACCCACAGGTGCGGCGCCTAGGAACGTCTCCCTGTGGTCACCTCTC
ATGACAAAGGAGACGTTTTT

Downstream 100 bases:

>100_bases
CGCGGTCCATTATTCCGTTCGATTTTCATTCCCACGTTGTGCGCGTTGTGATGCGCGATGGCAATCCGTGGTTTGTTGCT
ACCGATGTTGCTGTAGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MTQLPAAVCFSGKSLPTIDRDGVPHLTAADLARALGYKDTVSLTTVRRCGTVASKEIKNSGSSGNRTRNPCGFFTPARFY
VGRAAAIQHPVKGKAARRLLPVFDLPTPTGAARKNVSPWSSHEVGDVL

Sequences:

>Translated_128_residues
MTQLPAAVCFSGKSLPTIDRDGVPHLTAADLARALGYKDTVSLTTVRRCGTVASKEIKNSGSSGNRTRNPCGFFTPARFY
VGRAAAIQHPVKGKAARRLLPVFDLPTPTGAARKNVSPWSSHEVGDVL
>Mature_127_residues
TQLPAAVCFSGKSLPTIDRDGVPHLTAADLARALGYKDTVSLTTVRRCGTVASKEIKNSGSSGNRTRNPCGFFTPARFYV
GRAAAIQHPVKGKAARRLLPVFDLPTPTGAARKNVSPWSSHEVGDVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13605; Mature: 13474

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQLPAAVCFSGKSLPTIDRDGVPHLTAADLARALGYKDTVSLTTVRRCGTVASKEIKNS
CCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
GSSGNRTRNPCGFFTPARFYVGRAAAIQHPVKGKAARRLLPVFDLPTPTGAARKNVSPWS
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
SHEVGDVL
CCCCCCCC
>Mature Secondary Structure 
TQLPAAVCFSGKSLPTIDRDGVPHLTAADLARALGYKDTVSLTTVRRCGTVASKEIKNS
CCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
GSSGNRTRNPCGFFTPARFYVGRAAAIQHPVKGKAARRLLPVFDLPTPTGAARKNVSPWS
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
SHEVGDVL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA