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The map label for this gene is D

Identifier: 28198980

GI number: 28198980

Start: 1288547

End: 1289629

Strand: Reverse

Name: D

Synonym: PD1088

Alternate gene names: NA

Gene position: 1289629-1288547 (Counterclockwise)

Preceding gene: 28198981

Following gene: 28198979

Centisome position: 51.18

GC content: 58.26

Gene sequence:

>1083_bases
GTGGGAGTAACGCCCTGCTACCGGCTCATCGCCAACGACAACGATATTACCGCCCTCATCACCGAACGCATGGCAAGCCT
ACAGCTTTCCGATGAGTCCGGAAGCCATGCCGACACCTTGGAAGTTGTTCTGGCTGACCATCTACCTAACGCCCCGCTCA
AGCTGCCACCGATGGGAGCGGAACTGGAACTGGCATTAGGGTATGACGGCCAATTACGCCCAATGGGCGTTTTCGTGTGT
AGCGAAATCACATTGTCCGGATGGCCAGCCACAATGACCCTGCGTGCCCACGCCGCCCCTTGGGAAGGCACCCCCAAAGG
CAAAAGTGACCTGCAAACCCAAAAAACCCGCTCCTGGCCCGCCGGAACCACACTCGGCGCCATGCTATCCACAATGGCTG
CCGAACACGGCATGACCTGGGCGATCTCCCCGTCGCTCACAGGCGTGGCATTACCCCACATTGATCAGACAGAAGAATCA
GATATCAACGTCCTGCTACGGCTAGCACAGCGTTACGATGCGATTGCTAAACCTGCCGGGGGGCGACTGATCTTTGCCAA
ACGCGGCGAGGCTAAAAGCGTCACAGGCATTGATATGCCTCGCATCACCTTAACACCTGATGAGATTGCCTCCTGGCAGA
TGACCTACGCAACGCGGGACAGCCCCGGCACAGTGATTGCCTTCTACCGCATGGCACGCCGCGCTGAACTGCATCAAGTC
AGCGTCGGTGACGGGCATCCCGTTCACCGCATCAAACAATACCTGCCTGATGCCGCTGCTGCTATCGCCGCCGCTCGGGG
TGAACTCTCACGCCGTGCCCGCGCTGAAACCAAACTCACTCTAGAGATGGCAGGGCGTGCGGAGCTGTCTGCAGAAGCCG
TCTTGACACTCAACGGCTGGCGGGAAGGAGTGAATGGTGATTGGCTCGTCACCCGTGTGCAACATGGCCTAGACAAAAAC
GGCTACCGATGTAGCATCGAAGCCGAGCGGCCCAACAACCATCCAGATGTTGCTGCCGCCATCAACACGCAAGTACGCGA
TCAAGTCGTACGCCCGTCCCGCACCCATCATCAGAAAACATAA

Upstream 100 bases:

>100_bases
ACCACGGCTTAGCCGCATGGGGGCCCGTGCTGCCGGAAGGCATCGCGATCACCTTGCCAGACCCTGTGGCCACACCGCGC
ACCATTCCAGGAGTCACATT

Downstream 100 bases:

>100_bases
GGGCCTGCTATCGGTTCCGCATTCTCTGATACCTCAATGCGGCATTCTCTGATACCACCACCCCCACCGCGTCCAGCATA
TTAACCCTGCCGGACGCGGG

Product: phage-related tail protein

Products: NA

Alternate protein names: Phage Late Control D Family Protein; Phage Late Control D; Phage Late Control Gene D Protein; Tail Protein D; Phage-Related Tail Protein; Phage Protein D; Late Control Gene D Protein; Phage Late Control D Protein; Regulator Of Late Gene Expression; Bacteriophage Regulatory Protein; Pyocin R2_PP Tail Formation; Prophage Tail Protein; Fels-2 Prophage Protein; Phage Protein D-Like; Phage Late Control; Phage Protein; Phage-Related Late Control Gene Protein; Phage Tail Protein D; Pyocin R2_PP Tail Formation GPD; Phage Late Control Gene D Protein GpD; Gene Late Control D Protein; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Bacteriophage Late Control D Protein; Bacteriophage-Related Tail D Protein; Phage-Like Tail Protein; Prophage; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Late Control D Protein; Phage Regulator; Regulator Of Late Phage Gene Expression; Phage Late Control Gene D Protein-Like Protein; Phage Late Control Gene D Protein GPD; Late Control Gene D Protein Prophage; Bacteriophage Late Gene Control Protein D; Bacteriophage Tail Protein D; Gene D Protein; Late Gene Regulator

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MGVTPCYRLIANDNDITALITERMASLQLSDESGSHADTLEVVLADHLPNAPLKLPPMGAELELALGYDGQLRPMGVFVC
SEITLSGWPATMTLRAHAAPWEGTPKGKSDLQTQKTRSWPAGTTLGAMLSTMAAEHGMTWAISPSLTGVALPHIDQTEES
DINVLLRLAQRYDAIAKPAGGRLIFAKRGEAKSVTGIDMPRITLTPDEIASWQMTYATRDSPGTVIAFYRMARRAELHQV
SVGDGHPVHRIKQYLPDAAAAIAAARGELSRRARAETKLTLEMAGRAELSAEAVLTLNGWREGVNGDWLVTRVQHGLDKN
GYRCSIEAERPNNHPDVAAAINTQVRDQVVRPSRTHHQKT

Sequences:

>Translated_360_residues
MGVTPCYRLIANDNDITALITERMASLQLSDESGSHADTLEVVLADHLPNAPLKLPPMGAELELALGYDGQLRPMGVFVC
SEITLSGWPATMTLRAHAAPWEGTPKGKSDLQTQKTRSWPAGTTLGAMLSTMAAEHGMTWAISPSLTGVALPHIDQTEES
DINVLLRLAQRYDAIAKPAGGRLIFAKRGEAKSVTGIDMPRITLTPDEIASWQMTYATRDSPGTVIAFYRMARRAELHQV
SVGDGHPVHRIKQYLPDAAAAIAAARGELSRRARAETKLTLEMAGRAELSAEAVLTLNGWREGVNGDWLVTRVQHGLDKN
GYRCSIEAERPNNHPDVAAAINTQVRDQVVRPSRTHHQKT
>Mature_359_residues
GVTPCYRLIANDNDITALITERMASLQLSDESGSHADTLEVVLADHLPNAPLKLPPMGAELELALGYDGQLRPMGVFVCS
EITLSGWPATMTLRAHAAPWEGTPKGKSDLQTQKTRSWPAGTTLGAMLSTMAAEHGMTWAISPSLTGVALPHIDQTEESD
INVLLRLAQRYDAIAKPAGGRLIFAKRGEAKSVTGIDMPRITLTPDEIASWQMTYATRDSPGTVIAFYRMARRAELHQVS
VGDGHPVHRIKQYLPDAAAAIAAARGELSRRARAETKLTLEMAGRAELSAEAVLTLNGWREGVNGDWLVTRVQHGLDKNG
YRCSIEAERPNNHPDVAAAINTQVRDQVVRPSRTHHQKT

Specific function: Unknown

COG id: COG3500

COG function: function code R; Phage protein D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39157; Mature: 39026

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVTPCYRLIANDNDITALITERMASLQLSDESGSHADTLEVVLADHLPNAPLKLPPMGA
CCCCHHHHHHCCCCCEEHHHHHHHHHEEECCCCCCCCHHHHEEEECCCCCCCEECCCCCC
ELELALGYDGQLRPMGVFVCSEITLSGWPATMTLRAHAAPWEGTPKGKSDLQTQKTRSWP
CEEEEECCCCCCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCC
AGTTLGAMLSTMAAEHGMTWAISPSLTGVALPHIDQTEESDINVLLRLAQRYDAIAKPAG
CCCHHHHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
GRLIFAKRGEAKSVTGIDMPRITLTPDEIASWQMTYATRDSPGTVIAFYRMARRAELHQV
CEEEEEECCCCCCCCCCCCCEEEECHHHHCCEEEEEEECCCCCCEEHHHHHHHHHHHEEE
SVGDGHPVHRIKQYLPDAAAAIAAARGELSRRARAETKLTLEMAGRAELSAEAVLTLNGW
ECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECC
REGVNGDWLVTRVQHGLDKNGYRCSIEAERPNNHPDVAAAINTQVRDQVVRPSRTHHQKT
CCCCCCCEEEEEHHHCCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GVTPCYRLIANDNDITALITERMASLQLSDESGSHADTLEVVLADHLPNAPLKLPPMGA
CCCHHHHHHCCCCCEEHHHHHHHHHEEECCCCCCCCHHHHEEEECCCCCCCEECCCCCC
ELELALGYDGQLRPMGVFVCSEITLSGWPATMTLRAHAAPWEGTPKGKSDLQTQKTRSWP
CEEEEECCCCCCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHCCCC
AGTTLGAMLSTMAAEHGMTWAISPSLTGVALPHIDQTEESDINVLLRLAQRYDAIAKPAG
CCCHHHHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
GRLIFAKRGEAKSVTGIDMPRITLTPDEIASWQMTYATRDSPGTVIAFYRMARRAELHQV
CEEEEEECCCCCCCCCCCCCEEEECHHHHCCEEEEEEECCCCCCEEHHHHHHHHHHHEEE
SVGDGHPVHRIKQYLPDAAAAIAAARGELSRRARAETKLTLEMAGRAELSAEAVLTLNGW
ECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECC
REGVNGDWLVTRVQHGLDKNGYRCSIEAERPNNHPDVAAAINTQVRDQVVRPSRTHHQKT
CCCCCCCEEEEEHHHCCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA