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The map label for this gene is 28198979

Identifier: 28198979

GI number: 28198979

Start: 1288023

End: 1288355

Strand: Reverse

Name: 28198979

Synonym: PD1087

Alternate gene names: NA

Gene position: 1288355-1288023 (Counterclockwise)

Preceding gene: 28198980

Following gene: 28198978

Centisome position: 51.13

GC content: 53.75

Gene sequence:

>333_bases
ATGTACCACTACACCGAATCAGGCCTAGGTAATGTGTGGTTACACAACGGGTTTACGGTGCACAAGACACCCTACGGCGA
CGGCATTGCTATTGATAATTTACCAAGTCTCCATAGAAGCCTTTCCCTAGCGCTGGCGCTAAAACCGGCCACCCTTTCAG
GTGCCGAAATCCGTTTCATGAGAAAGGAACTCGAGCTATCGCAGCCCGAGTTCGCGGCTTGTCTGGGTACGACGACGCAG
ACGCTTGCGGCCTGGGAAGAGGGGAGGGCGGCGCTTCCAGATGCCGCAGACAAAATGATCCGCGTTTTGATCAATGCGCA
TTACAAAAGGTGA

Upstream 100 bases:

>100_bases
GGACGCGGGGCCATTAAGGCCGCTCCACCCGCGAGGCGCTGGAGCAGCGCCTTTTCCGGCACTTTGATTTAACCGCTAAA
AAAGGTTTTTCGTACTGAAC

Downstream 100 bases:

>100_bases
TGGGTGGATCGGTTAACCCCAAACCCCACGGGTAGAATCCAAGGTGGTTTGCGCTCCGCAATTTCTCATTTCCATCAAAA
ACCCCCTGAAAATAACGATT

Product: hypothetical protein

Products: NA

Alternate protein names: Hypothethical Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MYHYTESGLGNVWLHNGFTVHKTPYGDGIAIDNLPSLHRSLSLALALKPATLSGAEIRFMRKELELSQPEFAACLGTTTQ
TLAAWEEGRAALPDAADKMIRVLINAHYKR

Sequences:

>Translated_110_residues
MYHYTESGLGNVWLHNGFTVHKTPYGDGIAIDNLPSLHRSLSLALALKPATLSGAEIRFMRKELELSQPEFAACLGTTTQ
TLAAWEEGRAALPDAADKMIRVLINAHYKR
>Mature_110_residues
MYHYTESGLGNVWLHNGFTVHKTPYGDGIAIDNLPSLHRSLSLALALKPATLSGAEIRFMRKELELSQPEFAACLGTTTQ
TLAAWEEGRAALPDAADKMIRVLINAHYKR

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12151; Mature: 12151

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHYTESGLGNVWLHNGFTVHKTPYGDGIAIDNLPSLHRSLSLALALKPATLSGAEIRFM
CCCCCCCCCCCEEEECCEEEEECCCCCCEEECCCHHHHHHHEEEEEECCCCCCCHHHHHH
RKELELSQPEFAACLGTTTQTLAAWEEGRAALPDAADKMIRVLINAHYKR
HHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYHYTESGLGNVWLHNGFTVHKTPYGDGIAIDNLPSLHRSLSLALALKPATLSGAEIRFM
CCCCCCCCCCCEEEECCEEEEECCCCCCEEECCCHHHHHHHEEEEEECCCCCCCHHHHHH
RKELELSQPEFAACLGTTTQTLAAWEEGRAALPDAADKMIRVLINAHYKR
HHHHCCCCCHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA