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The map label for this gene is ydaU [H]

Identifier: 28198898

GI number: 28198898

Start: 1202816

End: 1203721

Strand: Reverse

Name: ydaU [H]

Synonym: PD1000

Alternate gene names: 28198898

Gene position: 1203721-1202816 (Counterclockwise)

Preceding gene: 28198899

Following gene: 28198897

Centisome position: 47.77

GC content: 53.53

Gene sequence:

>906_bases
GTGTCTGAGGGAGGCGGCATGAATTATTACGAACGCCACATTGGCGATTACGCCCGTGACACGGGGTACCTCTCGGTGCT
CGAACATGGCATTTACTGCCTGCTGTTAGATCGCTACTACGCCACAGAACAACCGATTCCGGCTAACAAGGCGCACCGCA
TCGCGCGTGCCCATAGCAAAAAAGAGAAAAGCGCTGTTGATGTGGTGCTTGATGAATTCTTCTTATTGCAAGAGGACGGC
TGGCATAACAAGCGATGTGATGAGGAAATCGCTCGCTTTCATGCAAGGGCAGCAGCACAGCAGGAGAACGGCAAAAAGGG
AGGGCGGCCTAGAAATTCTGCTCATCATGATAGCCAGACACAAACCCAACAGAAACCCGCTGACTTTGATTTAGATAACC
CAAATGAAACCCAATCAAAAGCCAACACAAACCCAAATGAAACCCAGATAGAACCCAATCAAAAGCCCACCAGACACCAG
ACTCCAGATCCCATTATCTCTTCCTCACTGTGTTCGGAAGAGAGTTTGGTATTCGCCGAGGACGGCAACGCCACCGGCAG
CACGGGAAAACCCAAGCGCTCGCCTCACGGCTCACGCCTGCCCGATGACTGGGTACCCAGTGAGGTTGATGTGTTGTACG
CCACCCAGCAGGGTGTGGATGGACGCTACGAAGCCGAGAAATTCCGCGATTACTGGCGCAGCGTGGCCGGAGCCAAGGGG
CGTAAACAGGATTGGGAGGCCACTTGGCGTAACTGGATTCGCCGCGCTGCCGAAGACAAAACCAGCTCCATGAAGCACGG
ATATCAACGCCATGAATACAATTCAAGACCTATGCGACTCGGCCTTGCAGATCAAGCCCGCGCCTTCCATAGACAATTTG
ACCTGCGTGACGGATCGCTCCAGTAA

Upstream 100 bases:

>100_bases
GGGAATTAACCGAAGCCGGTCGCGTGTGGTGTGAAGCCATTCCGTACTCGCGCAACGGGCACAGCAGTTATCAACTCTTG
TGGAATCCAGACGTCATCGC

Downstream 100 bases:

>100_bases
CACCGCTTCCCTTGCGCAAGCCACGGTGATCCCGTTCCCCTGGCTGCGCCGCTTATGGGAGCGGATGACTGCGTTCTATG
GCCACGCCTGGGTGAATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSEGGGMNYYERHIGDYARDTGYLSVLEHGIYCLLLDRYYATEQPIPANKAHRIARAHSKKEKSAVDVVLDEFFLLQEDG
WHNKRCDEEIARFHARAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRHQ
TPDPIISSSLCSEESLVFAEDGNATGSTGKPKRSPHGSRLPDDWVPSEVDVLYATQQGVDGRYEAEKFRDYWRSVAGAKG
RKQDWEATWRNWIRRAAEDKTSSMKHGYQRHEYNSRPMRLGLADQARAFHRQFDLRDGSLQ

Sequences:

>Translated_301_residues
MSEGGGMNYYERHIGDYARDTGYLSVLEHGIYCLLLDRYYATEQPIPANKAHRIARAHSKKEKSAVDVVLDEFFLLQEDG
WHNKRCDEEIARFHARAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRHQ
TPDPIISSSLCSEESLVFAEDGNATGSTGKPKRSPHGSRLPDDWVPSEVDVLYATQQGVDGRYEAEKFRDYWRSVAGAKG
RKQDWEATWRNWIRRAAEDKTSSMKHGYQRHEYNSRPMRLGLADQARAFHRQFDLRDGSLQ
>Mature_300_residues
SEGGGMNYYERHIGDYARDTGYLSVLEHGIYCLLLDRYYATEQPIPANKAHRIARAHSKKEKSAVDVVLDEFFLLQEDGW
HNKRCDEEIARFHARAAAQQENGKKGGRPRNSAHHDSQTQTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRHQT
PDPIISSSLCSEESLVFAEDGNATGSTGKPKRSPHGSRLPDDWVPSEVDVLYATQQGVDGRYEAEKFRDYWRSVAGAKGR
KQDWEATWRNWIRRAAEDKTSSMKHGYQRHEYNSRPMRLGLADQARAFHRQFDLRDGSLQ

Specific function: Unknown

COG id: COG3756

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787622, Length=121, Percent_Identity=32.2314049586777, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010781 [H]

Pfam domain/function: PF07120 DUF1376 [H]

EC number: NA

Molecular weight: Translated: 34399; Mature: 34268

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEGGGMNYYERHIGDYARDTGYLSVLEHGIYCLLLDRYYATEQPIPANKAHRIARAHSK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCHHHHHHHHHHHH
KEKSAVDVVLDEFFLLQEDGWHNKRCDEEIARFHARAAAQQENGKKGGRPRNSAHHDSQT
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
QTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRHQTPDPIISSSLCSEESLVFAE
HHHCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEE
DGNATGSTGKPKRSPHGSRLPDDWVPSEVDVLYATQQGVDGRYEAEKFRDYWRSVAGAKG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCC
RKQDWEATWRNWIRRAAEDKTSSMKHGYQRHEYNSRPMRLGLADQARAFHRQFDLRDGSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHCCCCCCC
Q
C
>Mature Secondary Structure 
SEGGGMNYYERHIGDYARDTGYLSVLEHGIYCLLLDRYYATEQPIPANKAHRIARAHSK
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCHHHHHHHHHHHH
KEKSAVDVVLDEFFLLQEDGWHNKRCDEEIARFHARAAAQQENGKKGGRPRNSAHHDSQT
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
QTQQKPADFDLDNPNETQSKANTNPNETQIEPNQKPTRHQTPDPIISSSLCSEESLVFAE
HHHCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCCCCCCCCCCHHHHHHHCCCCCEEEEE
DGNATGSTGKPKRSPHGSRLPDDWVPSEVDVLYATQQGVDGRYEAEKFRDYWRSVAGAKG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCC
RKQDWEATWRNWIRRAAEDKTSSMKHGYQRHEYNSRPMRLGLADQARAFHRQFDLRDGSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHCCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]