Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is 28198896
Identifier: 28198896
GI number: 28198896
Start: 1200406
End: 1200672
Strand: Reverse
Name: 28198896
Synonym: PD0998
Alternate gene names: NA
Gene position: 1200672-1200406 (Counterclockwise)
Preceding gene: 28198897
Following gene: 28198895
Centisome position: 47.65
GC content: 48.31
Gene sequence:
>267_bases ATGAACTACGAATTCGATTCTGCTAAAAGCAAAAGCAATCTTGACAAGCATGGATTGTCGCTCGCTGATGCCGATGGTTT TGAGTGGGAAACCGCCGTGGTTCGTGAAGACACACGTAAACAGTATGCAGAACCCCGTTTTGAAGCAAAGGGGTATATCG GCAACCGTCTGCATGTGATGGTGTTTTGCCTTCGTGGTGATGCTGTACGGGTCATCAGTCTGCGTAAGGCCAACTCAAGA GAGGTGAGAAGCTATGCCGACACTTAA
Upstream 100 bases:
>100_bases TCCCGAGATGAGTTGTTAGGTGCAGTGTTAGTTAAATTAACTTAATTGTTTATATAAAAAAGCCTGGTAACATCAATTTA TTATTTATACAATAATTTAA
Downstream 100 bases:
>100_bases ACAGGGGACGATGATCCCCACTCACGACGAAACAGAGGTAATTAATGCGGGCATCGCCGCTGATGTAGATGCGCGTGAAC TCGATAGCCAATGGCATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MNYEFDSAKSKSNLDKHGLSLADADGFEWETAVVREDTRKQYAEPRFEAKGYIGNRLHVMVFCLRGDAVRVISLRKANSR EVRSYADT
Sequences:
>Translated_88_residues MNYEFDSAKSKSNLDKHGLSLADADGFEWETAVVREDTRKQYAEPRFEAKGYIGNRLHVMVFCLRGDAVRVISLRKANSR EVRSYADT >Mature_88_residues MNYEFDSAKSKSNLDKHGLSLADADGFEWETAVVREDTRKQYAEPRFEAKGYIGNRLHVMVFCLRGDAVRVISLRKANSR EVRSYADT
Specific function: Unknown
COG id: COG2929
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10088; Mature: 10088
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYEFDSAKSKSNLDKHGLSLADADGFEWETAVVREDTRKQYAEPRFEAKGYIGNRLHVM CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE VFCLRGDAVRVISLRKANSREVRSYADT EEEECCCEEEEEEECCCCCHHHHHCCCC >Mature Secondary Structure MNYEFDSAKSKSNLDKHGLSLADADGFEWETAVVREDTRKQYAEPRFEAKGYIGNRLHVM CCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE VFCLRGDAVRVISLRKANSREVRSYADT EEEECCCEEEEEEECCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA