| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185481
Identifier: 62185481
GI number: 62185481
Start: 1022053
End: 1023435
Strand: Direct
Name: 62185481
Synonym: CAB879
Alternate gene names: NA
Gene position: 1022053-1023435 (Clockwise)
Preceding gene: 62185480
Following gene: 62185482
Centisome position: 89.31
GC content: 41.14
Gene sequence:
>1383_bases ATGACCGACTCTGTAACCTTCCCGTCTGTCGTGGACATGTCTTCACTAACAGAAAAACTCAAGTCTATTAATCAGGAGCA TTTATTAGATTCGTGGTCGTCCCTTTCTCAAAAACAACAACAGCGTCTCTATCACCAAATTTCGTCTATAGACATAGACC TTTTCCATAAACAAAGACAACTGATCACTTCTCCAAGACCTATCCTAAAAGATTTTCATCCCTTAACCTCTTTCACTTCC TCAGGAGAAGATCCTGAAAGAACTCAAGTAGGGACAAATCTCCTCAAGGAAAAGAAAGTCGCTTGTGTTGTTCTTGCTGG AGGCCAAGGATCTAGATTGAAATGTGACGGACCTAAAGGCTTGTTCCCTGTATCTCCTATCAAAAAGAAGCCCTTATTCC AGCTTGTTGCTGAAAAAGTCTGTGCAGCAAGCAAACTGGCAAATCAACCTTTGCCTTTAGCTTTTATGACATCACCTCTA AATAATCGTCAGACGCGTTCCTATTTCGAATCTAATGATTATTTCCATCTTGATCCCAACCAAGTAGACTTTTTCTGCCA ACCTCTTTGGCCTTTATTATCCTTATCGGGCGATCTGTTCCTTGAGGATACGGACACTTTATCCTTAGGGCCTAATGGAA ATGGTTGCCTAGCAACTCTTCTCTATACCTCAGGGTTATGGGAAAAATGGAAGAAAGCAGGAATTGAAATGGTGAGCGTG ATCCCTATCGACAATCCTCTAGCCCTACCTTTTGATGTAGAACTTTGTGGATTCCATGGTATGGAAAATAACGATGTCAC TATTAAAGCTGCTTTACGACAAACCGCGATTGAAGATGTGGGCATCTTAGTCAAATCTAATGACTCTGGGAAAACCTCCG TCATTGAATATTCTGAAATACCCCAAAATGAAAGATTTGCTACGAACTCGGATGGCACGCTAAAGTATTGCCTAGCCAAT ATCGGTCTCTATTGCTTATCTATGGATTTCATTGCCCATGCGGCCATGCGCGAACTTCCTCTTTATAAAGCTCATAAACA TGCAAAACAGTTAGGGCTATATTCCTCAGAGAAAAACTCTTGGAAATTCGAAGAATTTATCTTCGACCTCTTTTGCTATA GCGAACGTTGCCAAACGCTTGTGTACCCCCGTCAAGAATGTTTCGCACCACTAAAAAATCTTGAAGGCAACCATAGTCCT GCTACTGTCAGAGAAGCTCTTTCCGCTAGGGAACGTCAAATCTTCCATAAAGTTACTGGGAAAAAACTTTCTCCAAACAC AACATTTGAATTAGAAGCCGATTTTTATTATCCTTCAACCTCTACTTCCCTACACTGGGAAAATAAAGCGTTTTTCGAGG AACCATTTTTTGAGGCCTCATGA
Upstream 100 bases:
>100_bases GTAAATTACTAGAATTAATTAACCGTAGAAAAATCATCGAAAAGATCAAGAATAATAAGTATTCTAAATATCAAGAGATA GGAACGCAAGGCTAACTGTA
Downstream 100 bases:
>100_bases AAGAGAAAATTGCCTACTTAGGTATGGGCATTTGGGGATTTTGCCTTGCTTCCTTATTAGCGCATAAGGGTTATCGTGTA GTAGGATGGGCTCGTAATCC
Product: putative UDP-N-acetylhexosamine pyrophosphorylase
Products: diphosphate; UDP-N-acetyl-D-glucosamine
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MTDSVTFPSVVDMSSLTEKLKSINQEHLLDSWSSLSQKQQQRLYHQISSIDIDLFHKQRQLITSPRPILKDFHPLTSFTS SGEDPERTQVGTNLLKEKKVACVVLAGGQGSRLKCDGPKGLFPVSPIKKKPLFQLVAEKVCAASKLANQPLPLAFMTSPL NNRQTRSYFESNDYFHLDPNQVDFFCQPLWPLLSLSGDLFLEDTDTLSLGPNGNGCLATLLYTSGLWEKWKKAGIEMVSV IPIDNPLALPFDVELCGFHGMENNDVTIKAALRQTAIEDVGILVKSNDSGKTSVIEYSEIPQNERFATNSDGTLKYCLAN IGLYCLSMDFIAHAAMRELPLYKAHKHAKQLGLYSSEKNSWKFEEFIFDLFCYSERCQTLVYPRQECFAPLKNLEGNHSP ATVREALSARERQIFHKVTGKKLSPNTTFELEADFYYPSTSTSLHWENKAFFEEPFFEAS
Sequences:
>Translated_460_residues MTDSVTFPSVVDMSSLTEKLKSINQEHLLDSWSSLSQKQQQRLYHQISSIDIDLFHKQRQLITSPRPILKDFHPLTSFTS SGEDPERTQVGTNLLKEKKVACVVLAGGQGSRLKCDGPKGLFPVSPIKKKPLFQLVAEKVCAASKLANQPLPLAFMTSPL NNRQTRSYFESNDYFHLDPNQVDFFCQPLWPLLSLSGDLFLEDTDTLSLGPNGNGCLATLLYTSGLWEKWKKAGIEMVSV IPIDNPLALPFDVELCGFHGMENNDVTIKAALRQTAIEDVGILVKSNDSGKTSVIEYSEIPQNERFATNSDGTLKYCLAN IGLYCLSMDFIAHAAMRELPLYKAHKHAKQLGLYSSEKNSWKFEEFIFDLFCYSERCQTLVYPRQECFAPLKNLEGNHSP ATVREALSARERQIFHKVTGKKLSPNTTFELEADFYYPSTSTSLHWENKAFFEEPFFEAS >Mature_459_residues TDSVTFPSVVDMSSLTEKLKSINQEHLLDSWSSLSQKQQQRLYHQISSIDIDLFHKQRQLITSPRPILKDFHPLTSFTSS GEDPERTQVGTNLLKEKKVACVVLAGGQGSRLKCDGPKGLFPVSPIKKKPLFQLVAEKVCAASKLANQPLPLAFMTSPLN NRQTRSYFESNDYFHLDPNQVDFFCQPLWPLLSLSGDLFLEDTDTLSLGPNGNGCLATLLYTSGLWEKWKKAGIEMVSVI PIDNPLALPFDVELCGFHGMENNDVTIKAALRQTAIEDVGILVKSNDSGKTSVIEYSEIPQNERFATNSDGTLKYCLANI GLYCLSMDFIAHAAMRELPLYKAHKHAKQLGLYSSEKNSWKFEEFIFDLFCYSERCQTLVYPRQECFAPLKNLEGNHSPA TVREALSARERQIFHKVTGKKLSPNTTFELEADFYYPSTSTSLHWENKAFFEEPFFEAS
Specific function: Unknown
COG id: COG4284
COG function: function code G; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 1 family [H]
Homologues:
Organism=Homo sapiens, GI187936958, Length=421, Percent_Identity=31.1163895486936, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI156627575, Length=432, Percent_Identity=27.7777777777778, Blast_Score=168, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17552518, Length=436, Percent_Identity=27.7522935779816, Blast_Score=115, Evalue=6e-26, Organism=Caenorhabditis elegans, GI193206427, Length=339, Percent_Identity=27.7286135693215, Blast_Score=87, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6320100, Length=428, Percent_Identity=31.5420560747664, Blast_Score=153, Evalue=4e-38, Organism=Drosophila melanogaster, GI19920822, Length=474, Percent_Identity=27.4261603375527, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24582229, Length=470, Percent_Identity=27.2340425531915, Blast_Score=154, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002618 [H]
Pfam domain/function: PF01704 UDPGP [H]
EC number: 2.7.7.23
Molecular weight: Translated: 51883; Mature: 51751
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSVTFPSVVDMSSLTEKLKSINQEHLLDSWSSLSQKQQQRLYHQISSIDIDLFHKQRQ CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LITSPRPILKDFHPLTSFTSSGEDPERTQVGTNLLKEKKVACVVLAGGQGSRLKCDGPKG HHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCC LFPVSPIKKKPLFQLVAEKVCAASKLANQPLPLAFMTSPLNNRQTRSYFESNDYFHLDPN CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHCCCCEEEECCC QVDFFCQPLWPLLSLSGDLFLEDTDTLSLGPNGNGCLATLLYTSGLWEKWKKAGIEMVSV CCHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE IPIDNPLALPFDVELCGFHGMENNDVTIKAALRQTAIEDVGILVKSNDSGKTSVIEYSEI EECCCCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHHHHCEEEEECCCCCCEEEEEHHHC PQNERFATNSDGTLKYCLANIGLYCLSMDFIAHAAMRELPLYKAHKHAKQLGLYSSEKNS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC WKFEEFIFDLFCYSERCQTLVYPRQECFAPLKNLEGNHSPATVREALSARERQIFHKVTG CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC KKLSPNTTFELEADFYYPSTSTSLHWENKAFFEEPFFEAS CCCCCCCEEEEEEEEECCCCCCEEEECCCCHHCCCCCCCC >Mature Secondary Structure TDSVTFPSVVDMSSLTEKLKSINQEHLLDSWSSLSQKQQQRLYHQISSIDIDLFHKQRQ CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LITSPRPILKDFHPLTSFTSSGEDPERTQVGTNLLKEKKVACVVLAGGQGSRLKCDGPKG HHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCC LFPVSPIKKKPLFQLVAEKVCAASKLANQPLPLAFMTSPLNNRQTRSYFESNDYFHLDPN CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHCCCCEEEECCC QVDFFCQPLWPLLSLSGDLFLEDTDTLSLGPNGNGCLATLLYTSGLWEKWKKAGIEMVSV CCHHHHHHHHHHHHCCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE IPIDNPLALPFDVELCGFHGMENNDVTIKAALRQTAIEDVGILVKSNDSGKTSVIEYSEI EECCCCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHHHHCEEEEECCCCCCEEEEEHHHC PQNERFATNSDGTLKYCLANIGLYCLSMDFIAHAAMRELPLYKAHKHAKQLGLYSSEKNS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC WKFEEFIFDLFCYSERCQTLVYPRQECFAPLKNLEGNHSPATVREALSARERQIFHKVTG CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC KKLSPNTTFELEADFYYPSTSTSLHWENKAFFEEPFFEAS CCCCCCCEEEEEEEEECCCCCCEEEECCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UTP; N-acetyl-alpha-D-glucosamine 1-phosphate
Specific reaction: UTP + N-acetyl-alpha-D-glucosamine 1-phosphate = diphosphate + UDP-N-acetyl-D-glucosamine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA