| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185346
Identifier: 62185346
GI number: 62185346
Start: 846442
End: 847515
Strand: Direct
Name: 62185346
Synonym: CAB733
Alternate gene names: NA
Gene position: 846442-847515 (Clockwise)
Preceding gene: 62185343
Following gene: 62185347
Centisome position: 73.97
GC content: 35.66
Gene sequence:
>1074_bases ATGCCCATTTTATGGAAAGTCTTAATTTTCCGTTATTTAAAAACTGTGACTTTTTGCACGCTTAGCCTTATCTGTATTTC TATTATTAGTTCGCTTCAAGAAATCGTTAGTTATATAGCAAAAGACGTTCCTTATCCAACAGTGTTGCGACTAACAGCTT ACCAGATTCCCTACTTATTGCCCTTTATTCTTCCTATTTCTTGCTTTATTTCTGCTTTCTCGCTTTTTCGAGGATTGTCT GATAATAACCAAATTACCTTCCTGAAAGCATCTGGAGCTTCCCAAGCGATCATTACTTTTCCGGTGCTTATGGTTTCTTG CGCCATTTGTTGTGTAAATTTTTATACATGTTCTGAATTAGCTTCTATTTGTCGTTTTCAAACCTGTAAAGAAATTGCCA ATATGGCCATGACTTCGCCGACATTATTACTCCAGACACTACAGAAGAAAGAAAGCAATCGTATTTTTATTACTGTGGAT CATTGTGCTAAAAGTAAATTTGACAATGTAATTACTGCTTTAAAAAGAGATAAAGAAATTGCTAATGTGGGGCTGATTAA AACTATCATTCCCGATGTTGCTAATGATACTGTACAAGCACGGGGTGTAGTGATGATCTCCAAGCTGCCCTCCACACTGA CGGATCAATGCTCTTCGCATTCCAAAGAATACTATATAGAGACCTTAGATGAAATGTTAATTCCTAAGATAACTTCAACG TTATTTGCTGGAAAATCTTACATGAAAACGCGGACAGATTATTTACCTTGGAAGCAACTTGTAAAACAATCATTTAGCCA TACATATCTACCCGAAACCTTAAGAAGAATTGGTATAGGTTTGCTCTGTATTACTCTTACCTATTCTGGTATGGTTTTAG GTACCTATAAGCCAAGATTTCGCAAATCCATAACTCTTTATTGTATTTTCCCCGTGATGGATTTAATTTTATTAATAGTT GGCAAAAACACGTCCTCTCTATTTCCTGCTCTTACGTTGTTTATTTTCCCTCAGGTAATTTCTTGGATTGTTTTTGCTAT CAAAGCGTATCGAGAAAATAGGGGTTATGCATAA
Upstream 100 bases:
>100_bases GTCCGTATAAATTCATTACAAATACTTTCAGGCTTATCAACTTACAGAGATAGGCTTACTTTGTCCTTAACCTTGAATAA CTCCTGATACCAGGTATGCT
Downstream 100 bases:
>100_bases GTCATGTATATTTGGAAACGTTATGTGTTAACCAAGTTTTGGTTTTCCTTGGTATCATTAATTGTATTAGCTTTTGTTTT TTATGCCTCTATTCATCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MPILWKVLIFRYLKTVTFCTLSLICISIISSLQEIVSYIAKDVPYPTVLRLTAYQIPYLLPFILPISCFISAFSLFRGLS DNNQITFLKASGASQAIITFPVLMVSCAICCVNFYTCSELASICRFQTCKEIANMAMTSPTLLLQTLQKKESNRIFITVD HCAKSKFDNVITALKRDKEIANVGLIKTIIPDVANDTVQARGVVMISKLPSTLTDQCSSHSKEYYIETLDEMLIPKITST LFAGKSYMKTRTDYLPWKQLVKQSFSHTYLPETLRRIGIGLLCITLTYSGMVLGTYKPRFRKSITLYCIFPVMDLILLIV GKNTSSLFPALTLFIFPQVISWIVFAIKAYRENRGYA
Sequences:
>Translated_357_residues MPILWKVLIFRYLKTVTFCTLSLICISIISSLQEIVSYIAKDVPYPTVLRLTAYQIPYLLPFILPISCFISAFSLFRGLS DNNQITFLKASGASQAIITFPVLMVSCAICCVNFYTCSELASICRFQTCKEIANMAMTSPTLLLQTLQKKESNRIFITVD HCAKSKFDNVITALKRDKEIANVGLIKTIIPDVANDTVQARGVVMISKLPSTLTDQCSSHSKEYYIETLDEMLIPKITST LFAGKSYMKTRTDYLPWKQLVKQSFSHTYLPETLRRIGIGLLCITLTYSGMVLGTYKPRFRKSITLYCIFPVMDLILLIV GKNTSSLFPALTLFIFPQVISWIVFAIKAYRENRGYA >Mature_356_residues PILWKVLIFRYLKTVTFCTLSLICISIISSLQEIVSYIAKDVPYPTVLRLTAYQIPYLLPFILPISCFISAFSLFRGLSD NNQITFLKASGASQAIITFPVLMVSCAICCVNFYTCSELASICRFQTCKEIANMAMTSPTLLLQTLQKKESNRIFITVDH CAKSKFDNVITALKRDKEIANVGLIKTIIPDVANDTVQARGVVMISKLPSTLTDQCSSHSKEYYIETLDEMLIPKITSTL FAGKSYMKTRTDYLPWKQLVKQSFSHTYLPETLRRIGIGLLCITLTYSGMVLGTYKPRFRKSITLYCIFPVMDLILLIVG KNTSSLFPALTLFIFPQVISWIVFAIKAYRENRGYA
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40329; Mature: 40198
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILWKVLIFRYLKTVTFCTLSLICISIISSLQEIVSYIAKDVPYPTVLRLTAYQIPYLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH PFILPISCFISAFSLFRGLSDNNQITFLKASGASQAIITFPVLMVSCAICCVNFYTCSEL HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ASICRFQTCKEIANMAMTSPTLLLQTLQKKESNRIFITVDHCAKSKFDNVITALKRDKEI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHH ANVGLIKTIIPDVANDTVQARGVVMISKLPSTLTDQCSSHSKEYYIETLDEMLIPKITST HHHHHHHHHHHHHCCCCHHHCCEEEEHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LFAGKSYMKTRTDYLPWKQLVKQSFSHTYLPETLRRIGIGLLCITLTYSGMVLGTYKPRF HHHCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHH RKSITLYCIFPVMDLILLIVGKNTSSLFPALTLFIFPQVISWIVFAIKAYRENRGYA HHCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PILWKVLIFRYLKTVTFCTLSLICISIISSLQEIVSYIAKDVPYPTVLRLTAYQIPYLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH PFILPISCFISAFSLFRGLSDNNQITFLKASGASQAIITFPVLMVSCAICCVNFYTCSEL HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ASICRFQTCKEIANMAMTSPTLLLQTLQKKESNRIFITVDHCAKSKFDNVITALKRDKEI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHH ANVGLIKTIIPDVANDTVQARGVVMISKLPSTLTDQCSSHSKEYYIETLDEMLIPKITST HHHHHHHHHHHHHCCCCHHHCCEEEEHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LFAGKSYMKTRTDYLPWKQLVKQSFSHTYLPETLRRIGIGLLCITLTYSGMVLGTYKPRF HHHCHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHH RKSITLYCIFPVMDLILLIVGKNTSSLFPALTLFIFPQVISWIVFAIKAYRENRGYA HHCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA