| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185302
Identifier: 62185302
GI number: 62185302
Start: 799666
End: 800325
Strand: Direct
Name: 62185302
Synonym: CAB689
Alternate gene names: NA
Gene position: 799666-800325 (Clockwise)
Preceding gene: 62185301
Following gene: 62185303
Centisome position: 69.88
GC content: 37.73
Gene sequence:
>660_bases ATGCTTACAAATACAATAACCACCTTTGTATCTTACGCATCACGTTGGCCATCTGTCCTGAAACATATCGTTGAGGATAA CGAGTTACATAGCAAGTGGGTAAATACACTATCATTTTTAGAAAACTGTGGAGCAAAAAAAATCTCCATTAGTGAGCATC CTACACAAGTAAAAAAAGAGGTATTAAAACACGCCGCTGAAGAATTCCGTCATGCGTTTTATCTAAAAACTCAAATCTCA AGAATCTCAGATCAACCTTTTCTTGATTATTCCCTAGAAAAAATGCTCGGTTCCTATAGCGTTAAGTATTACCTACATCT TCTAGATTTGCGGACATGTAAAATACTTAAAAACCGCTACCACCTTGCTGGACAAACATTGAAAACTACGGCCTACGTAC TTGTGACCTCTGCTATAGAAATGCGTGCTGCTGAGCTCTACTCTATCTACCATACTATTTTGAAACAGGCAGGGAGCAAA GTCACAATAAAATCCATTATCTTGGAAGAACAAGAACACCTAGAAGAAATGGAATCAGAGTTAGCAGCATTACCACACGC CAAAGAACTGCTTTCCTATACTTGCAAAATTGAAAGCGCACTATGCTTACAGTTAGTCTCTTACTTAGAAAAACTCGTAG AGCAAACATGTAAGATTTAG
Upstream 100 bases:
>100_bases TCATTCTACGCCCTTTAGGCCATACTATTTATGTCCTTCCTCCCTACTGTATCCACGAGGAAGACCTGCATCGAATTTAT CATTACCTCCAGGAGATTCT
Downstream 100 bases:
>100_bases TCTTCAAAAATAGAGTATATTTTCTTGGACGATAAATTAGTGTTCAGGCAAGCTTTTTGGAAAACAAAAGTAAGTTAGCC AAAATGCTTGCTTATAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MLTNTITTFVSYASRWPSVLKHIVEDNELHSKWVNTLSFLENCGAKKISISEHPTQVKKEVLKHAAEEFRHAFYLKTQIS RISDQPFLDYSLEKMLGSYSVKYYLHLLDLRTCKILKNRYHLAGQTLKTTAYVLVTSAIEMRAAELYSIYHTILKQAGSK VTIKSIILEEQEHLEEMESELAALPHAKELLSYTCKIESALCLQLVSYLEKLVEQTCKI
Sequences:
>Translated_219_residues MLTNTITTFVSYASRWPSVLKHIVEDNELHSKWVNTLSFLENCGAKKISISEHPTQVKKEVLKHAAEEFRHAFYLKTQIS RISDQPFLDYSLEKMLGSYSVKYYLHLLDLRTCKILKNRYHLAGQTLKTTAYVLVTSAIEMRAAELYSIYHTILKQAGSK VTIKSIILEEQEHLEEMESELAALPHAKELLSYTCKIESALCLQLVSYLEKLVEQTCKI >Mature_219_residues MLTNTITTFVSYASRWPSVLKHIVEDNELHSKWVNTLSFLENCGAKKISISEHPTQVKKEVLKHAAEEFRHAFYLKTQIS RISDQPFLDYSLEKMLGSYSVKYYLHLLDLRTCKILKNRYHLAGQTLKTTAYVLVTSAIEMRAAELYSIYHTILKQAGSK VTIKSIILEEQEHLEEMESELAALPHAKELLSYTCKIESALCLQLVSYLEKLVEQTCKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25202; Mature: 25202
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTNTITTFVSYASRWPSVLKHIVEDNELHSKWVNTLSFLENCGAKKISISEHPTQVKKE CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHH VLKHAAEEFRHAFYLKTQISRISDQPFLDYSLEKMLGSYSVKYYLHLLDLRTCKILKNRY HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLAGQTLKTTAYVLVTSAIEMRAAELYSIYHTILKQAGSKVTIKSIILEEQEHLEEMESE HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LAALPHAKELLSYTCKIESALCLQLVSYLEKLVEQTCKI HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTNTITTFVSYASRWPSVLKHIVEDNELHSKWVNTLSFLENCGAKKISISEHPTQVKKE CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHH VLKHAAEEFRHAFYLKTQISRISDQPFLDYSLEKMLGSYSVKYYLHLLDLRTCKILKNRY HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLAGQTLKTTAYVLVTSAIEMRAAELYSIYHTILKQAGSKVTIKSIILEEQEHLEEMESE HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LAALPHAKELLSYTCKIESALCLQLVSYLEKLVEQTCKI HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA