| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185270
Identifier: 62185270
GI number: 62185270
Start: 763888
End: 764640
Strand: Direct
Name: 62185270
Synonym: CAB657
Alternate gene names: NA
Gene position: 763888-764640 (Clockwise)
Preceding gene: 62185259
Following gene: 62185283
Centisome position: 66.75
GC content: 38.65
Gene sequence:
>753_bases ATGAAACTTCATGCTCTTGTTTCTTTTCTGTTTACTAGTTTGTCTCTTACAATGAGTGCAAATCCTCAAACACAAAGTAC AGCAAAACCGGCCCAAAGACATCCCTCGAGCGTTTCTCAACGAAGAGCATTGAAAAAATCACAATCTGGTATTTCTAAGG CAACGGCTTCCCGCAACGTTACAAAAAGAGCGCATAAAAGTCGAAGAACAACACAACAAACAAAAGAAAAACCCTTAGTT TCTTGGGTTACTTATTCTACAGATGAATATACTATTCGCATCCCGAGTAACTGGCAGTGCATAAATGATAAAACACAACT TCCTGAAAAACTGGATGTCGTATTTATTGGCCAAGGGACGGGCTCTTTAACCCCCACGATCAATATTTCTCAAGAAATTA TATCGAAGAATCAACCTGAATACATTGAAGAGATACTGGCTTATCACAAAGCCAATGACATGACACTAGAATCTTCTGTA TTCACTCATATTCAATCTCTTAATGGAGAATTCACCATTATCAAAACAGAAAAGAATTCTTCGTGGGGCAAAGTCTTTTG TCTTCAAGGCGTTGCGGTCATCAACCACAAGGCTTATATTTTTACAAGCACAGCTACCTTGGATGACTACCCCAATGTAT CTTTGATTTTCTTAAAGACGGTGTCTTCCTTTAGGCTTTCAGAAAAAGAAGCTACTTCTGGGGATATGATCCTTAGAGAA GCGCTCAAAGCCTTACAAGAAGAGATAGGATAA
Upstream 100 bases:
>100_bases CTACCGTTAAGAAAACAGAGTTTATCTTAAAAAAAAATTCGATTATGATCCAACTAACCCAACAGATTATAGCATTTGAT CATTTAAATAAAAGATTTCT
Downstream 100 bases:
>100_bases GGTTTCAAAACTATTTAGACTAAAGATGCCCTTTCTTTATGTAAAACTTCCCTTTTGAGAGCATCAAAAATAAAACGAAC TGCTATCTGTTTTCCTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKLHALVSFLFTSLSLTMSANPQTQSTAKPAQRHPSSVSQRRALKKSQSGISKATASRNVTKRAHKSRRTTQQTKEKPLV SWVTYSTDEYTIRIPSNWQCINDKTQLPEKLDVVFIGQGTGSLTPTINISQEIISKNQPEYIEEILAYHKANDMTLESSV FTHIQSLNGEFTIIKTEKNSSWGKVFCLQGVAVINHKAYIFTSTATLDDYPNVSLIFLKTVSSFRLSEKEATSGDMILRE ALKALQEEIG
Sequences:
>Translated_250_residues MKLHALVSFLFTSLSLTMSANPQTQSTAKPAQRHPSSVSQRRALKKSQSGISKATASRNVTKRAHKSRRTTQQTKEKPLV SWVTYSTDEYTIRIPSNWQCINDKTQLPEKLDVVFIGQGTGSLTPTINISQEIISKNQPEYIEEILAYHKANDMTLESSV FTHIQSLNGEFTIIKTEKNSSWGKVFCLQGVAVINHKAYIFTSTATLDDYPNVSLIFLKTVSSFRLSEKEATSGDMILRE ALKALQEEIG >Mature_250_residues MKLHALVSFLFTSLSLTMSANPQTQSTAKPAQRHPSSVSQRRALKKSQSGISKATASRNVTKRAHKSRRTTQQTKEKPLV SWVTYSTDEYTIRIPSNWQCINDKTQLPEKLDVVFIGQGTGSLTPTINISQEIISKNQPEYIEEILAYHKANDMTLESSV FTHIQSLNGEFTIIKTEKNSSWGKVFCLQGVAVINHKAYIFTSTATLDDYPNVSLIFLKTVSSFRLSEKEATSGDMILRE ALKALQEEIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27959; Mature: 27959
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLHALVSFLFTSLSLTMSANPQTQSTAKPAQRHPSSVSQRRALKKSQSGISKATASRNV CHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH TKRAHKSRRTTQQTKEKPLVSWVTYSTDEYTIRIPSNWQCINDKTQLPEKLDVVFIGQGT HHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCEEECCHHCCCCCCCEEEEECCC GSLTPTINISQEIISKNQPEYIEEILAYHKANDMTLESSVFTHIQSLNGEFTIIKTEKNS CCCCCEEECHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCEEEEEECCCC SWGKVFCLQGVAVINHKAYIFTSTATLDDYPNVSLIFLKTVSSFRLSEKEATSGDMILRE CCCEEEEECCEEEEECCEEEEEECCCCCCCCCEEEEEEEEHHHHHCCCCCCCCHHHHHHH ALKALQEEIG HHHHHHHHCC >Mature Secondary Structure MKLHALVSFLFTSLSLTMSANPQTQSTAKPAQRHPSSVSQRRALKKSQSGISKATASRNV CHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH TKRAHKSRRTTQQTKEKPLVSWVTYSTDEYTIRIPSNWQCINDKTQLPEKLDVVFIGQGT HHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCEEECCHHCCCCCCCEEEEECCC GSLTPTINISQEIISKNQPEYIEEILAYHKANDMTLESSVFTHIQSLNGEFTIIKTEKNS CCCCCEEECHHHHHCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCEEEEEECCCC SWGKVFCLQGVAVINHKAYIFTSTATLDDYPNVSLIFLKTVSSFRLSEKEATSGDMILRE CCCEEEEECCEEEEECCEEEEEECCCCCCCCCEEEEEEEEHHHHHCCCCCCCCHHHHHHH ALKALQEEIG HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA