| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is uvrA [H]
Identifier: 62185259
GI number: 62185259
Start: 744554
End: 749974
Strand: Direct
Name: uvrA [H]
Synonym: CAB646
Alternate gene names: 62185259
Gene position: 744554-749974 (Clockwise)
Preceding gene: 62185257
Following gene: 62185270
Centisome position: 65.06
GC content: 41.8
Gene sequence:
>5421_bases ATGCCCAGTTTACCCGTTCGTATTTCCGGTATTACCGTGAGAAATCTGAAAAATATCTCCATAGAATTTCTACCAGGAGA AATTGTCCTACTCACAGGGGTATCAGGATCTGGAAAATCTTCGTTAGCTTTTGATACTGTGTATGCCGCAGGAAGAAAAC GGTATCTATCCACGCTACCTTCATTTTTTGCGACGAATTTATCTTCTTTACCTGAACCTACCGTTGAAAGCATCCAAGGC TTATCTCCAACGATTGCTGTTAAGCAAAATCATTTTGCTTATCACTCTCATGCTACTATCGGCAGTGTTACAGAACTTTC CCAACACCTTGCGTTGCTATTTTCCCTAGACGGGGAGGCTAGAGATCCCGTAAGTAACAAACCACTGCATCTACAAAGCA AAGAAAAGATTCTTGCCACACTTGCCCAGATCCCTGAGGGCACGCAAATCACACTACTTGCTCCTTTACCAGATACAAGT AGCTTAGCAATTCAAGAATGCGTCAGGCAGGGATATACTAAAATCCGCATGCATAATGAAATCTCATCCATCTATCCTTT GTTATCGTCGCCTCTGACTACTGATCACCCTATCGACATTGTTGTGGATGCTTTCATTAAAAATGAAAGTAACAATGCAA GAATGAAAGTGAGCTTATTTGCAGCTCTGCAACTAGGTCAGGGGCGCTGCTCTATACATACCGGATCCCAAGAAGAGACC TTTTCTACCCAAGTATATATACCAGAAACCCAACAAACTTATACGCCATTAACGCGACAATTGTTTTCTCCCCATAACCT AGAAGATCGTTGTTTTAAGTGCCAGGGAACAGGAGTTCAGATCACCATTGAAGACCCCTCTCTTATCCAAAATCATTTAT CGATCCGAGAAAACTGTTGTAAGCTTGCTGGAAACTGCTCGACGTATTTTTACCATGCCCTTTATCAATCTCTAGCGGAC ACGTTAAACTTCAGCTTAGATACTCCGTGGGAAAATCTCCCTGAGCATATCCAGGACGCGTTTCTCTACGGGCAAAAATG CCTAGTTCTTCCAGTGCGCCTTTTTGATCCTGCACTTGGGAAGAAATCCCTTACCCACAAAGTGTGGAGAGGCATTCTTA ATGATATTGGTGAAAAAGTACGCTATGGAGCGAAACCTTCAAAATATGTTCCTGAGGGGACCTCGGCAGTCCCGTGTCCT CAATGTCAAGGAATAGGGATCGGAGAATACGCATCTGCAGCCACTTGGCAAGGAAAAACTTTTATCGAACTGCAGAAAAT GCCTCTTGATGCGTTGTTCTCTTTGACGTCTTCTATAACACCATCATCACAATCTGTGCATGAGGTACTAGAAGGTTTCA ACAATCGCCTTGCCACACTTATTCAGTTGGGTCTTTCCTACCTTACCTTAGATAGAGCCTTAGCAACACTATCCGGAGGA GAGCAAGAGCGTACGGCTCTTGCTAAGCACCTTGGTGCTGAGTTATCAGGAATTACCTATATTCTTGATGAACCTTCCAT AGGCCTCCATCCTCGTGATACAGATAAGCTCATACAAGTAATTCAAAAACTACGCAATCAAGGGAATTCCATTCTTCTTG TAGAACATGATGAACAGATGATCTCTTTTGCAGATCGTATTATTGATATTGGTCCGCGGGCAGGGATTTTTGGAGGTGAG GTACTATTTAACGGCACCCCTCAAGAATTTTTAAACAAAAGCAACTCTCTAACAGCAAAATATTTACGAAACGAACTCGC TATAGATATCCCCGAAAGACGCGCTAAAACACCATCCACTCTTTCCCTATCTCATGCAACAACCAACAATTTAAAAGACG TGGCTATTTCCCTACCCTTGGAAAGAATCACCGCAGTGACGGGTGTTTCAGGATCTGGAAAATCGTCTTTAATTAACGAC ACGTTAGTTCCTGCTATGGAACGTCTTATACAAGGAAAACCAGAACCTTACCTACGCATAGATGGAGGGGAGATTTCTCG TGTTGTACATATTACTCGGGATCTTCCTGGCCGCTCGCAACGTTCGATTTCCCTAACGTATATTAAAGCTTTTGATGATC TGCGAGAGCTATTTTCCCAACTACCTAAAAGTCAACGGCTGGGATTAACTAAAGGGCATTTTAGTTTTAACCTACCGTTA GGATCATGTACGGAATGCCAAGGCATAGGGGCGGTAACTGTAGACGATCATACCCTCATTCCCTGTCCTCTGTGTCATGG AAAACGTTTCCAACCCCAAATTTTAGAGGTACAGTATCAAAGGAAAAGTATCGCGGACATTTTAGAAATGACAGCATATG AGGCGGAGAAATTCTTTATGACTACTCCCCATATTCATGAAAAGATACACGCCTTATGTTCTCTAGGGCTTGATCACCTT CCTTTAGGACGACCTTTATCTAGCTTATCAGGAGGGGAAATTCAGAGATTAAAGCTTACCTATGAGCTTCTTTCTCCTTC TAAAAAACCTACCCTCTATATTCTTGATGAGCCGACGACAGGATTACATACTCATGACATCCATGCTCTTATCCAAGTGT TGTTTTCTCTTACACACCAGGGACATACGGTAGTGATCATAGAACATAATATGCACATTGTAAAAACGGCAGATCACGTC ATTGAACTGGGTCCTGAAGGAGGCAATCTCGGTGGGTATGTCCTGGCCTCATGTTCTCCTGAAGAGCTCATTCTCTTAGA CACGCCTACGGCAAAAGCTTTGCAACCATATTTTACAAAGACCCCAGCGCTCCCTCCATGTACTACACCATGCCCAAATA CGCACATTCTTAGAGATATTTCCGTTAAAGATGCTTATCATCACAATCTTAAACACATTGATGTGACTTTGCCTCGCAAT GCCTTAACCGCTATTTCTGGACCTTCAGCATCAGGAAAGCATACTTTAGTTTTCGATATCCTTTATGCTTCAGGAAATAT CGCTTATGCCGAACTATTTCCTTATTACGTGCGTGAAGCTCTTATTAAAAAGACCCCTCTACCCAAAGTAGAAAGTGTTC GAGGATTATCTCCAGTTATTGCCATCAGAAAAACAGGAATAAAGAAAAACTCCAGACATTCCTTAGCTTCAGCTTTAGAC ATTACTGACGGGCTTGAAAAACTCTTTTCCCTTGTAGGCAAACCCCACTGCCCATTATCAGGAACTCTCTTAGAAAAAAT CACTCCACAAACTCTTGTGGCGAAACTTCTCCATGAATATCCGCATGCTTATGTAACAATCACTGCGCCTATATCCTCAG ATGAAGACCTCTCTATTACTTTAGAAGCAAAGAAAAAAGAAGGGTATCTAAAATTATTTGCCAATAAGGAAGTTTATGAT CTTGAAGAACCTCTCCCTGAGATTTTAGAAGATCCGGCTATCGTTATCCAACATACAAAAATCTCCAAAAACCATGAGGC TTCGCTTTTATCTTCTTTAACTTTAGCTTTCTCCTTATCTCCCACTCCAAAATTACATATTCATAATCATCAGGGAATTG TGCATTCACTAACCTGTAATCTAGGCTGGCAAGATTCTTTAGGAAATAGCTACCCCAATGTTACACGCAAGCTGTTATCT CGGGAGCATACTGAAGGGCAATGTCAACAATGTCATGGATCCGGGACCATTTTAAAACTCTCTTTAATGGATCATAAAGA GAAAATTCTCAATTACTCTCCTATAGCTCTCTTTGAACTCTTCTTCCCTGAGCACCCCATACAACCTGTTCTTGATCTGA TTCAAGAACTCAAAATTGCCAAAGCCACGCCCATCAAAAATCTTGATATGCACACTCAAGAACGCTTATTTAAAGGAACT CGCAGACATCCAGGATTAGAAAGAATCCTTCTTGACCATGGTAACCGCGTTCCCTTATGTCCTCTTTTACAACCTTTGCT CATCCAAGACGTCTGCCCAACATGCTCCGGATGGGGAATCCACACATACGCTCAACATGTACGCATAGGAAACACCTCCA TTGTAGATATCTACCAACAAGACACCCATTTTCTGAAAGACTTCTTAAAAACTCTTCATGATGATCAAGCTCAGCCGATT ATACAAGATTTACACAATCGTTTAACGTTCATTGATAAGGTAGGTTTAAGCTACATTACCTTAGGACAACAACAAAATAC TCTCAGCGATGGTGAGTATTATCGCCTACACTTAGCAAAGAAAATCTCTACAAATCTTACTGATATTATTTATCTTCTCG AAGATCCTTTATCTGGGCTCCATCCTAAGGATGTTCCCACTCTCATACAACTGATTAAAGAGCTCATTGCTAACAACAAT ACCGTTATTGCTACTGATCGTAGCCATATATTACAGCATTACGCGGAGCATACAATTCATTTAGGACCAGGATCCGGGCC TCAGGGAGGGTACCTCACAACTGCTAGATCCGTATCTCTGGACAATGAGGAATATCCTCAAACTCCCTTTAAACATACTT TAGATGTGCGCCTCACGGTGCATAACATCACTGACCTCAGTGTACAAGCTCCTCTCCGCAGCCTGGTTGCCATTGCTGGT GTATCAGGATCTGGAAAGACCTCATTGCTAACTGAAGGCTTTTATCAACAAGCTCAAAAGCTTATACACAATGGTGATGC GCTATTTTCTAATGTCATATTTTTAGATTCTCATCCTCTTTCTTCTTCCCAACGTTCGGATATCAGTACGTATTTCGATA TTGCTCCAAGTTTAAGAAACTTCTATGCATCGCTCACGCAGGCTAAAGCCTTAAACATCACAGCAAGTATGTTCAGTACA AATACTAAGCAAGGGCAGTGTGTAGATTGTTTAGGATTAGGTTACCATCTCATCGACAGAGCTTTCTATGCCTTGGAGAA ACGTGTATGTCCGACGTGTTCAGGATACCGGATCCAACCCCTAGCTCAAGAAGCTGTTTATGAAGGGAAGCACTTTGGAA AATTACTACAAACCCCTATTGAAGAACTCCCGATACTCTTTCCTTTTCTTCAAAGGATCCAAGCTCCTTTACAAGCGCTT ATACACGCAGGACTGGGCTATTTACCTTTAGGTCAAAACCTCTCTTCCCTATCGCTTAGTGAAAAGATCGCTGTGAAAAT AGCGAAGTTCCTCTACTTACCTCCAAAAGAACCCACATTATTTCTGCTCGATGAGATAGCGGCTTCCTTAGATAGAAATC AGAAATCCCAACTACAAAAACTCTTCCGTACCCTGGTATCTCAAGGGCATTCAGTTATTTACGTTGATCTTGATGTGTAT TTGCTAAAACAAGCAGATTATATCATAGAGTTGGGGCCTGGTTCCGGGAAATATGGAGGGAAACTGCTTTTTGCAGGAAG ACCAAAAGATATCTTAGCTTCAGAATCCTCTATATTGAAAACATACATGTGTGGGTTATAA
Upstream 100 bases:
>100_bases TTTCTATAAAGTTAAAAGTAAATCAAACTAGTTTCTATTAAGTAGTTATAATTATCCATGTAGAAAATTTCTTCTTATTT CTAAAATTATTGTGAGATCT
Downstream 100 bases:
>100_bases AAGACGCTCTTTCACAAGAAGATCATAGGCAACGCGACAGTTGTCACGCTCCACATCATCTCCTAAACAATGGAAAAAGA TAAACTTTTGCAAGAGTAAG
Product: excinuclease ABC subunit A
Products: NA
Alternate protein names: UvrA protein; Excinuclease ABC subunit A [H]
Number of amino acids: Translated: 1806; Mature: 1805
Protein sequence:
>1806_residues MPSLPVRISGITVRNLKNISIEFLPGEIVLLTGVSGSGKSSLAFDTVYAAGRKRYLSTLPSFFATNLSSLPEPTVESIQG LSPTIAVKQNHFAYHSHATIGSVTELSQHLALLFSLDGEARDPVSNKPLHLQSKEKILATLAQIPEGTQITLLAPLPDTS SLAIQECVRQGYTKIRMHNEISSIYPLLSSPLTTDHPIDIVVDAFIKNESNNARMKVSLFAALQLGQGRCSIHTGSQEET FSTQVYIPETQQTYTPLTRQLFSPHNLEDRCFKCQGTGVQITIEDPSLIQNHLSIRENCCKLAGNCSTYFYHALYQSLAD TLNFSLDTPWENLPEHIQDAFLYGQKCLVLPVRLFDPALGKKSLTHKVWRGILNDIGEKVRYGAKPSKYVPEGTSAVPCP QCQGIGIGEYASAATWQGKTFIELQKMPLDALFSLTSSITPSSQSVHEVLEGFNNRLATLIQLGLSYLTLDRALATLSGG EQERTALAKHLGAELSGITYILDEPSIGLHPRDTDKLIQVIQKLRNQGNSILLVEHDEQMISFADRIIDIGPRAGIFGGE VLFNGTPQEFLNKSNSLTAKYLRNELAIDIPERRAKTPSTLSLSHATTNNLKDVAISLPLERITAVTGVSGSGKSSLIND TLVPAMERLIQGKPEPYLRIDGGEISRVVHITRDLPGRSQRSISLTYIKAFDDLRELFSQLPKSQRLGLTKGHFSFNLPL GSCTECQGIGAVTVDDHTLIPCPLCHGKRFQPQILEVQYQRKSIADILEMTAYEAEKFFMTTPHIHEKIHALCSLGLDHL PLGRPLSSLSGGEIQRLKLTYELLSPSKKPTLYILDEPTTGLHTHDIHALIQVLFSLTHQGHTVVIIEHNMHIVKTADHV IELGPEGGNLGGYVLASCSPEELILLDTPTAKALQPYFTKTPALPPCTTPCPNTHILRDISVKDAYHHNLKHIDVTLPRN ALTAISGPSASGKHTLVFDILYASGNIAYAELFPYYVREALIKKTPLPKVESVRGLSPVIAIRKTGIKKNSRHSLASALD ITDGLEKLFSLVGKPHCPLSGTLLEKITPQTLVAKLLHEYPHAYVTITAPISSDEDLSITLEAKKKEGYLKLFANKEVYD LEEPLPEILEDPAIVIQHTKISKNHEASLLSSLTLAFSLSPTPKLHIHNHQGIVHSLTCNLGWQDSLGNSYPNVTRKLLS REHTEGQCQQCHGSGTILKLSLMDHKEKILNYSPIALFELFFPEHPIQPVLDLIQELKIAKATPIKNLDMHTQERLFKGT RRHPGLERILLDHGNRVPLCPLLQPLLIQDVCPTCSGWGIHTYAQHVRIGNTSIVDIYQQDTHFLKDFLKTLHDDQAQPI IQDLHNRLTFIDKVGLSYITLGQQQNTLSDGEYYRLHLAKKISTNLTDIIYLLEDPLSGLHPKDVPTLIQLIKELIANNN TVIATDRSHILQHYAEHTIHLGPGSGPQGGYLTTARSVSLDNEEYPQTPFKHTLDVRLTVHNITDLSVQAPLRSLVAIAG VSGSGKTSLLTEGFYQQAQKLIHNGDALFSNVIFLDSHPLSSSQRSDISTYFDIAPSLRNFYASLTQAKALNITASMFST NTKQGQCVDCLGLGYHLIDRAFYALEKRVCPTCSGYRIQPLAQEAVYEGKHFGKLLQTPIEELPILFPFLQRIQAPLQAL IHAGLGYLPLGQNLSSLSLSEKIAVKIAKFLYLPPKEPTLFLLDEIAASLDRNQKSQLQKLFRTLVSQGHSVIYVDLDVY LLKQADYIIELGPGSGKYGGKLLFAGRPKDILASESSILKTYMCGL
Sequences:
>Translated_1806_residues MPSLPVRISGITVRNLKNISIEFLPGEIVLLTGVSGSGKSSLAFDTVYAAGRKRYLSTLPSFFATNLSSLPEPTVESIQG LSPTIAVKQNHFAYHSHATIGSVTELSQHLALLFSLDGEARDPVSNKPLHLQSKEKILATLAQIPEGTQITLLAPLPDTS SLAIQECVRQGYTKIRMHNEISSIYPLLSSPLTTDHPIDIVVDAFIKNESNNARMKVSLFAALQLGQGRCSIHTGSQEET FSTQVYIPETQQTYTPLTRQLFSPHNLEDRCFKCQGTGVQITIEDPSLIQNHLSIRENCCKLAGNCSTYFYHALYQSLAD TLNFSLDTPWENLPEHIQDAFLYGQKCLVLPVRLFDPALGKKSLTHKVWRGILNDIGEKVRYGAKPSKYVPEGTSAVPCP QCQGIGIGEYASAATWQGKTFIELQKMPLDALFSLTSSITPSSQSVHEVLEGFNNRLATLIQLGLSYLTLDRALATLSGG EQERTALAKHLGAELSGITYILDEPSIGLHPRDTDKLIQVIQKLRNQGNSILLVEHDEQMISFADRIIDIGPRAGIFGGE VLFNGTPQEFLNKSNSLTAKYLRNELAIDIPERRAKTPSTLSLSHATTNNLKDVAISLPLERITAVTGVSGSGKSSLIND TLVPAMERLIQGKPEPYLRIDGGEISRVVHITRDLPGRSQRSISLTYIKAFDDLRELFSQLPKSQRLGLTKGHFSFNLPL GSCTECQGIGAVTVDDHTLIPCPLCHGKRFQPQILEVQYQRKSIADILEMTAYEAEKFFMTTPHIHEKIHALCSLGLDHL PLGRPLSSLSGGEIQRLKLTYELLSPSKKPTLYILDEPTTGLHTHDIHALIQVLFSLTHQGHTVVIIEHNMHIVKTADHV IELGPEGGNLGGYVLASCSPEELILLDTPTAKALQPYFTKTPALPPCTTPCPNTHILRDISVKDAYHHNLKHIDVTLPRN ALTAISGPSASGKHTLVFDILYASGNIAYAELFPYYVREALIKKTPLPKVESVRGLSPVIAIRKTGIKKNSRHSLASALD ITDGLEKLFSLVGKPHCPLSGTLLEKITPQTLVAKLLHEYPHAYVTITAPISSDEDLSITLEAKKKEGYLKLFANKEVYD LEEPLPEILEDPAIVIQHTKISKNHEASLLSSLTLAFSLSPTPKLHIHNHQGIVHSLTCNLGWQDSLGNSYPNVTRKLLS REHTEGQCQQCHGSGTILKLSLMDHKEKILNYSPIALFELFFPEHPIQPVLDLIQELKIAKATPIKNLDMHTQERLFKGT RRHPGLERILLDHGNRVPLCPLLQPLLIQDVCPTCSGWGIHTYAQHVRIGNTSIVDIYQQDTHFLKDFLKTLHDDQAQPI IQDLHNRLTFIDKVGLSYITLGQQQNTLSDGEYYRLHLAKKISTNLTDIIYLLEDPLSGLHPKDVPTLIQLIKELIANNN TVIATDRSHILQHYAEHTIHLGPGSGPQGGYLTTARSVSLDNEEYPQTPFKHTLDVRLTVHNITDLSVQAPLRSLVAIAG VSGSGKTSLLTEGFYQQAQKLIHNGDALFSNVIFLDSHPLSSSQRSDISTYFDIAPSLRNFYASLTQAKALNITASMFST NTKQGQCVDCLGLGYHLIDRAFYALEKRVCPTCSGYRIQPLAQEAVYEGKHFGKLLQTPIEELPILFPFLQRIQAPLQAL IHAGLGYLPLGQNLSSLSLSEKIAVKIAKFLYLPPKEPTLFLLDEIAASLDRNQKSQLQKLFRTLVSQGHSVIYVDLDVY LLKQADYIIELGPGSGKYGGKLLFAGRPKDILASESSILKTYMCGL >Mature_1805_residues PSLPVRISGITVRNLKNISIEFLPGEIVLLTGVSGSGKSSLAFDTVYAAGRKRYLSTLPSFFATNLSSLPEPTVESIQGL SPTIAVKQNHFAYHSHATIGSVTELSQHLALLFSLDGEARDPVSNKPLHLQSKEKILATLAQIPEGTQITLLAPLPDTSS LAIQECVRQGYTKIRMHNEISSIYPLLSSPLTTDHPIDIVVDAFIKNESNNARMKVSLFAALQLGQGRCSIHTGSQEETF STQVYIPETQQTYTPLTRQLFSPHNLEDRCFKCQGTGVQITIEDPSLIQNHLSIRENCCKLAGNCSTYFYHALYQSLADT LNFSLDTPWENLPEHIQDAFLYGQKCLVLPVRLFDPALGKKSLTHKVWRGILNDIGEKVRYGAKPSKYVPEGTSAVPCPQ CQGIGIGEYASAATWQGKTFIELQKMPLDALFSLTSSITPSSQSVHEVLEGFNNRLATLIQLGLSYLTLDRALATLSGGE QERTALAKHLGAELSGITYILDEPSIGLHPRDTDKLIQVIQKLRNQGNSILLVEHDEQMISFADRIIDIGPRAGIFGGEV LFNGTPQEFLNKSNSLTAKYLRNELAIDIPERRAKTPSTLSLSHATTNNLKDVAISLPLERITAVTGVSGSGKSSLINDT LVPAMERLIQGKPEPYLRIDGGEISRVVHITRDLPGRSQRSISLTYIKAFDDLRELFSQLPKSQRLGLTKGHFSFNLPLG SCTECQGIGAVTVDDHTLIPCPLCHGKRFQPQILEVQYQRKSIADILEMTAYEAEKFFMTTPHIHEKIHALCSLGLDHLP LGRPLSSLSGGEIQRLKLTYELLSPSKKPTLYILDEPTTGLHTHDIHALIQVLFSLTHQGHTVVIIEHNMHIVKTADHVI ELGPEGGNLGGYVLASCSPEELILLDTPTAKALQPYFTKTPALPPCTTPCPNTHILRDISVKDAYHHNLKHIDVTLPRNA LTAISGPSASGKHTLVFDILYASGNIAYAELFPYYVREALIKKTPLPKVESVRGLSPVIAIRKTGIKKNSRHSLASALDI TDGLEKLFSLVGKPHCPLSGTLLEKITPQTLVAKLLHEYPHAYVTITAPISSDEDLSITLEAKKKEGYLKLFANKEVYDL EEPLPEILEDPAIVIQHTKISKNHEASLLSSLTLAFSLSPTPKLHIHNHQGIVHSLTCNLGWQDSLGNSYPNVTRKLLSR EHTEGQCQQCHGSGTILKLSLMDHKEKILNYSPIALFELFFPEHPIQPVLDLIQELKIAKATPIKNLDMHTQERLFKGTR RHPGLERILLDHGNRVPLCPLLQPLLIQDVCPTCSGWGIHTYAQHVRIGNTSIVDIYQQDTHFLKDFLKTLHDDQAQPII QDLHNRLTFIDKVGLSYITLGQQQNTLSDGEYYRLHLAKKISTNLTDIIYLLEDPLSGLHPKDVPTLIQLIKELIANNNT VIATDRSHILQHYAEHTIHLGPGSGPQGGYLTTARSVSLDNEEYPQTPFKHTLDVRLTVHNITDLSVQAPLRSLVAIAGV SGSGKTSLLTEGFYQQAQKLIHNGDALFSNVIFLDSHPLSSSQRSDISTYFDIAPSLRNFYASLTQAKALNITASMFSTN TKQGQCVDCLGLGYHLIDRAFYALEKRVCPTCSGYRIQPLAQEAVYEGKHFGKLLQTPIEELPILFPFLQRIQAPLQALI HAGLGYLPLGQNLSSLSLSEKIAVKIAKFLYLPPKEPTLFLLDEIAASLDRNQKSQLQKLFRTLVSQGHSVIYVDLDVYL LKQADYIIELGPGSGKYGGKLLFAGRPKDILASESSILKTYMCGL
Specific function: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion h
COG id: COG0178
COG function: function code L; Excinuclease ATPase subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 3 ABC transporter domains [H]
Homologues:
Organism=Escherichia coli, GI2367343, Length=939, Percent_Identity=36.741214057508, Blast_Score=579, Evalue=1e-166,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR013815 - InterPro: IPR004602 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 199559; Mature: 199428
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLPVRISGITVRNLKNISIEFLPGEIVLLTGVSGSGKSSLAFDTVYAAGRKRYLSTLP CCCCCEEEECEEEECCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH SFFATNLSSLPEPTVESIQGLSPTIAVKQNHFAYHSHATIGSVTELSQHLALLFSLDGEA HHHHHHHHCCCCCHHHHHCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHEEEEECCCCC RDPVSNKPLHLQSKEKILATLAQIPEGTQITLLAPLPDTSSLAIQECVRQGYTKIRMHNE CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEHHH ISSIYPLLSSPLTTDHPIDIVVDAFIKNESNNARMKVSLFAALQLGQGRCSIHTGSQEET HHHHHHHHCCCCCCCCCHHHEEEEHHCCCCCCCEEEEEEEEEHHCCCCEEEEECCCCCCC FSTQVYIPETQQTYTPLTRQLFSPHNLEDRCFKCQGTGVQITIEDPSLIQNHLSIRENCC EEEEEEECCCCHHHHHHHHHHCCCCCCCCHHEEECCCCEEEEECCHHHHHHHHHHHHHHH KLAGNCSTYFYHALYQSLADTLNFSLDTPWENLPEHIQDAFLYGQKCLVLPVRLFDPALG HHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCC KKSLTHKVWRGILNDIGEKVRYGAKPSKYVPEGTSAVPCPQCQGIGIGEYASAATWQGKT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE FIELQKMPLDALFSLTSSITPSSQSVHEVLEGFNNRLATLIQLGLSYLTLDRALATLSGG EEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EQERTALAKHLGAELSGITYILDEPSIGLHPRDTDKLIQVIQKLRNQGNSILLVEHDEQM CHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHH ISFADRIIDIGPRAGIFGGEVLFNGTPQEFLNKSNSLTAKYLRNELAIDIPERRAKTPST HHHHHHHHHCCCCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHEECCCHHHCCCCCC LSLSHATTNNLKDVAISLPLERITAVTGVSGSGKSSLINDTLVPAMERLIQGKPEPYLRI EEECCCCCCCCHHHEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE DGGEISRVVHITRDLPGRSQRSISLTYIKAFDDLRELFSQLPKSQRLGLTKGHFSFNLPL CCCCEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHCCCCEECCEEEECCC GSCTECQGIGAVTVDDHTLIPCPLCHGKRFQPQILEVQYQRKSIADILEMTAYEAEKFFM CCCCCCCCCCEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE TTPHIHEKIHALCSLGLDHLPLGRPLSSLSGGEIQRLKLTYELLSPSKKPTLYILDEPTT CCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEEEEHHHHCCCCCCEEEEEECCCC GLHTHDIHALIQVLFSLTHQGHTVVIIEHNMHIVKTADHVIELGPEGGNLGGYVLASCSP CCCHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCHHEEECCCCCCCCCEEEECCCC EELILLDTPTAKALQPYFTKTPALPPCTTPCPNTHILRDISVKDAYHHNLKHIDVTLPRN CCEEEEECCCHHHHCCHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCEEEEEEECCC ALTAISGPSASGKHTLVFDILYASGNIAYAELFPYYVREALIKKTPLPKVESVRGLSPVI HHHEECCCCCCCCEEEEEEEEEECCCEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHH AIRKTGIKKNSRHSLASALDITDGLEKLFSLVGKPHCPLSGTLLEKITPQTLVAKLLHEY HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHC PHAYVTITAPISSDEDLSITLEAKKKEGYLKLFANKEVYDLEEPLPEILEDPAIVIQHTK CCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEE ISKNHEASLLSSLTLAFSLSPTPKLHIHNHQGIVHSLTCNLGWQDSLGNSYPNVTRKLLS CCCCHHHHHHHHHHHEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH REHTEGQCQQCHGSGTILKLSLMDHKEKILNYSPIALFELFFPEHPIQPVLDLIQELKIA CCCCCCHHHHHCCCCCEEEEEEHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH KATPIKNLDMHTQERLFKGTRRHPGLERILLDHGNRVPLCPLLQPLLIQDVCPTCSGWGI HCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCH HTYAQHVRIGNTSIVDIYQQDTHFLKDFLKTLHDDQAQPIIQDLHNRLTFIDKVGLSYIT HHHHHHEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEE LGQQQNTLSDGEYYRLHLAKKISTNLTDIIYLLEDPLSGLHPKDVPTLIQLIKELIANNN ECCCCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC TVIATDRSHILQHYAEHTIHLGPGSGPQGGYLTTARSVSLDNEEYPQTPFKHTLDVRLTV EEEEECHHHHHHHHHHCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEE HNITDLSVQAPLRSLVAIAGVSGSGKTSLLTEGFYQQAQKLIHNGDALFSNVIFLDSHPL ECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCC SSSQRSDISTYFDIAPSLRNFYASLTQAKALNITASMFSTNTKQGQCVDCLGLGYHLIDR CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCHHHHHHHHHHHHH AFYALEKRVCPTCSGYRIQPLAQEAVYEGKHFGKLLQTPIEELPILFPFLQRIQAPLQAL HHHHHHHHCCCCCCCCEECHHHHHHHHCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHH IHAGLGYLPLGQNLSSLSLSEKIAVKIAKFLYLPPKEPTLFLLDEIAASLDRNQKSQLQK HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHH LFRTLVSQGHSVIYVDLDVYLLKQADYIIELGPGSGKYGGKLLFAGRPKDILASESSILK HHHHHHHCCCEEEEEEEEEEEEECCCEEEEECCCCCCCCCEEEECCCCHHHHHCHHHHHH TYMCGL HHHCCC >Mature Secondary Structure PSLPVRISGITVRNLKNISIEFLPGEIVLLTGVSGSGKSSLAFDTVYAAGRKRYLSTLP CCCCEEEECEEEECCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH SFFATNLSSLPEPTVESIQGLSPTIAVKQNHFAYHSHATIGSVTELSQHLALLFSLDGEA HHHHHHHHCCCCCHHHHHCCCCCEEEEECCCEEEECCCCCCHHHHHHHHHEEEEECCCCC RDPVSNKPLHLQSKEKILATLAQIPEGTQITLLAPLPDTSSLAIQECVRQGYTKIRMHNE CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEHHH ISSIYPLLSSPLTTDHPIDIVVDAFIKNESNNARMKVSLFAALQLGQGRCSIHTGSQEET HHHHHHHHCCCCCCCCCHHHEEEEHHCCCCCCCEEEEEEEEEHHCCCCEEEEECCCCCCC FSTQVYIPETQQTYTPLTRQLFSPHNLEDRCFKCQGTGVQITIEDPSLIQNHLSIRENCC EEEEEEECCCCHHHHHHHHHHCCCCCCCCHHEEECCCCEEEEECCHHHHHHHHHHHHHHH KLAGNCSTYFYHALYQSLADTLNFSLDTPWENLPEHIQDAFLYGQKCLVLPVRLFDPALG HHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCC KKSLTHKVWRGILNDIGEKVRYGAKPSKYVPEGTSAVPCPQCQGIGIGEYASAATWQGKT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE FIELQKMPLDALFSLTSSITPSSQSVHEVLEGFNNRLATLIQLGLSYLTLDRALATLSGG EEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EQERTALAKHLGAELSGITYILDEPSIGLHPRDTDKLIQVIQKLRNQGNSILLVEHDEQM CHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHH ISFADRIIDIGPRAGIFGGEVLFNGTPQEFLNKSNSLTAKYLRNELAIDIPERRAKTPST HHHHHHHHHCCCCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHEECCCHHHCCCCCC LSLSHATTNNLKDVAISLPLERITAVTGVSGSGKSSLINDTLVPAMERLIQGKPEPYLRI EEECCCCCCCCHHHEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE DGGEISRVVHITRDLPGRSQRSISLTYIKAFDDLRELFSQLPKSQRLGLTKGHFSFNLPL CCCCEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCHHCCCCEECCEEEECCC GSCTECQGIGAVTVDDHTLIPCPLCHGKRFQPQILEVQYQRKSIADILEMTAYEAEKFFM CCCCCCCCCCEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE TTPHIHEKIHALCSLGLDHLPLGRPLSSLSGGEIQRLKLTYELLSPSKKPTLYILDEPTT CCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEEEEHHHHCCCCCCEEEEEECCCC GLHTHDIHALIQVLFSLTHQGHTVVIIEHNMHIVKTADHVIELGPEGGNLGGYVLASCSP CCCHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCHHEEECCCCCCCCCEEEECCCC EELILLDTPTAKALQPYFTKTPALPPCTTPCPNTHILRDISVKDAYHHNLKHIDVTLPRN CCEEEEECCCHHHHCCHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCEEEEEEECCC ALTAISGPSASGKHTLVFDILYASGNIAYAELFPYYVREALIKKTPLPKVESVRGLSPVI HHHEECCCCCCCCEEEEEEEEEECCCEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHH AIRKTGIKKNSRHSLASALDITDGLEKLFSLVGKPHCPLSGTLLEKITPQTLVAKLLHEY HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHC PHAYVTITAPISSDEDLSITLEAKKKEGYLKLFANKEVYDLEEPLPEILEDPAIVIQHTK CCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEE ISKNHEASLLSSLTLAFSLSPTPKLHIHNHQGIVHSLTCNLGWQDSLGNSYPNVTRKLLS CCCCHHHHHHHHHHHEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH REHTEGQCQQCHGSGTILKLSLMDHKEKILNYSPIALFELFFPEHPIQPVLDLIQELKIA CCCCCCHHHHHCCCCCEEEEEEHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHH KATPIKNLDMHTQERLFKGTRRHPGLERILLDHGNRVPLCPLLQPLLIQDVCPTCSGWGI HCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCH HTYAQHVRIGNTSIVDIYQQDTHFLKDFLKTLHDDQAQPIIQDLHNRLTFIDKVGLSYIT HHHHHHEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEE LGQQQNTLSDGEYYRLHLAKKISTNLTDIIYLLEDPLSGLHPKDVPTLIQLIKELIANNN ECCCCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC TVIATDRSHILQHYAEHTIHLGPGSGPQGGYLTTARSVSLDNEEYPQTPFKHTLDVRLTV EEEEECHHHHHHHHHHCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEEE HNITDLSVQAPLRSLVAIAGVSGSGKTSLLTEGFYQQAQKLIHNGDALFSNVIFLDSHPL ECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCC SSSQRSDISTYFDIAPSLRNFYASLTQAKALNITASMFSTNTKQGQCVDCLGLGYHLIDR CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCHHHHHHHHHHHHH AFYALEKRVCPTCSGYRIQPLAQEAVYEGKHFGKLLQTPIEELPILFPFLQRIQAPLQAL HHHHHHHHCCCCCCCCEECHHHHHHHHCCHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHH IHAGLGYLPLGQNLSSLSLSEKIAVKIAKFLYLPPKEPTLFLLDEIAASLDRNQKSQLQK HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHH LFRTLVSQGHSVIYVDLDVYLLKQADYIIELGPGSGKYGGKLLFAGRPKDILASESSILK HHHHHHHCCCEEEEEEEEEEEEECCCEEEEECCCCCCCCCEEEECCCCHHHHHCHHHHHH TYMCGL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: Hydrolase; Acting on ester bonds [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]