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The map label for this gene is ybgI [C]

Identifier: 62185224

GI number: 62185224

Start: 702479

End: 703234

Strand: Direct

Name: ybgI [C]

Synonym: CAB612

Alternate gene names: 62185224

Gene position: 702479-703234 (Clockwise)

Preceding gene: 62185212

Following gene: 62185225

Centisome position: 61.39

GC content: 42.46

Gene sequence:

>756_bases
ATGAAAGTTGCTGATCTTCTCGTCTACTTAAACGATCTACTCTCTCCGGAAACATTTCCTGATTACTGTCCTAATGGACT
GCAAGTAGGTAGCCCAAATTCTGATATTCAGAAGATAGCCGTTGGCGTCACCGCTGATTTGTCCACGATACTCGCCACGA
TTGAAATGGAAGCGAATGTCTTGATTGTGCATCACGGCCTATTCTGGAAAGGCATGCCGTATCCCATCACAGGCATGCTC
CATGAGCGAATACAATACTTGATCAAACATGACATACAATTATTAGCCTATCACCTCCCCCTGGATGCTCATCGCATGAT
TGGGAACAACTGGAAGGTAGCTCATGATTTACAATGGACCCATCTTCAACCCTTCGGGAGTTTTCTTCCCCATCTTGGAG
TTCAAGGATCGTTCTCTCCTACGCCCATAAAACTATTTATAAAAAACTTATCCGACTACTACCAAACTCCAATAAAAGCT
CAAGTACTTGGCGGAAAAGAAATCATTTCCTCTGCAGCACTGATTTCTGGAGGCGCTTATAAAGAGCTATCTCAAGCGAT
TCTTTGCAACGTAGATTGCTTTATTACGGGAAATTTTGATGAGCCCGCATGGTCTACTGCCATGGAAAATCATGTGCACT
TTCTAGCTTTTGGACATACCGCAACAGAAAAAATAGGACCAAAAGCTCTTGCTCATGACTTACAAACCCACCTACAAATT
TCCTCAACATTTATTGATACGGACAATCCATTTTAA

Upstream 100 bases:

>100_bases
GTCTGCCCCCCCGCAACCTAAGCACTGCGTAAAGATTGTCAGGAATTTTCATTTGTGAATTAATAATAAAAATAAATTCT
CATAACTATTGTTATCGTAC

Downstream 100 bases:

>100_bases
TCTACAGCAATGCGCGTGATCGTTCTTGGCTTTTTCTTAGAACTTATTTTATAGTAAGTTCTTTTTACTATTTCAAAAAT
CTATAGACTGTCATGAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKVADLLVYLNDLLSPETFPDYCPNGLQVGSPNSDIQKIAVGVTADLSTILATIEMEANVLIVHHGLFWKGMPYPITGML
HERIQYLIKHDIQLLAYHLPLDAHRMIGNNWKVAHDLQWTHLQPFGSFLPHLGVQGSFSPTPIKLFIKNLSDYYQTPIKA
QVLGGKEIISSAALISGGAYKELSQAILCNVDCFITGNFDEPAWSTAMENHVHFLAFGHTATEKIGPKALAHDLQTHLQI
SSTFIDTDNPF

Sequences:

>Translated_251_residues
MKVADLLVYLNDLLSPETFPDYCPNGLQVGSPNSDIQKIAVGVTADLSTILATIEMEANVLIVHHGLFWKGMPYPITGML
HERIQYLIKHDIQLLAYHLPLDAHRMIGNNWKVAHDLQWTHLQPFGSFLPHLGVQGSFSPTPIKLFIKNLSDYYQTPIKA
QVLGGKEIISSAALISGGAYKELSQAILCNVDCFITGNFDEPAWSTAMENHVHFLAFGHTATEKIGPKALAHDLQTHLQI
SSTFIDTDNPF
>Mature_251_residues
MKVADLLVYLNDLLSPETFPDYCPNGLQVGSPNSDIQKIAVGVTADLSTILATIEMEANVLIVHHGLFWKGMPYPITGML
HERIQYLIKHDIQLLAYHLPLDAHRMIGNNWKVAHDLQWTHLQPFGSFLPHLGVQGSFSPTPIKLFIKNLSDYYQTPIKA
QVLGGKEIISSAALISGGAYKELSQAILCNVDCFITGNFDEPAWSTAMENHVHFLAFGHTATEKIGPKALAHDLQTHLQI
SSTFIDTDNPF

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=255, Percent_Identity=35.2941176470588, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27828; Mature: 27828

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVADLLVYLNDLLSPETFPDYCPNGLQVGSPNSDIQKIAVGVTADLSTILATIEMEANV
CCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCE
LIVHHGLFWKGMPYPITGMLHERIQYLIKHDIQLLAYHLPLDAHRMIGNNWKVAHDLQWT
EEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCC
HLQPFGSFLPHLGVQGSFSPTPIKLFIKNLSDYYQTPIKAQVLGGKEIISSAALISGGAY
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCH
KELSQAILCNVDCFITGNFDEPAWSTAMENHVHFLAFGHTATEKIGPKALAHDLQTHLQI
HHHHHHHHCCCEEEEECCCCCCHHHHHHHCCEEEEEECCCHHHHCCHHHHHHHHHHHHEE
SSTFIDTDNPF
HEEEECCCCCC
>Mature Secondary Structure
MKVADLLVYLNDLLSPETFPDYCPNGLQVGSPNSDIQKIAVGVTADLSTILATIEMEANV
CCHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCE
LIVHHGLFWKGMPYPITGMLHERIQYLIKHDIQLLAYHLPLDAHRMIGNNWKVAHDLQWT
EEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCC
HLQPFGSFLPHLGVQGSFSPTPIKLFIKNLSDYYQTPIKAQVLGGKEIISSAALISGGAY
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCH
KELSQAILCNVDCFITGNFDEPAWSTAMENHVHFLAFGHTATEKIGPKALAHDLQTHLQI
HHHHHHHHCCCEEEEECCCCCCHHHHHHHCCEEEEEECCCHHHHCCHHHHHHHHHHHHEE
SSTFIDTDNPF
HEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]