| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is yjbG [H]
Identifier: 62185225
GI number: 62185225
Start: 703327
End: 705153
Strand: Direct
Name: yjbG [H]
Synonym: CAB613
Alternate gene names: 62185225
Gene position: 703327-705153 (Clockwise)
Preceding gene: 62185224
Following gene: 62185226
Centisome position: 61.46
GC content: 39.14
Gene sequence:
>1827_bases ATGAGCGTAGAATTCAACAAGCAACAAGTCCGTCCAAGAAGTGAAATTTCCCCTCAAGATTGTTGGGATATCACCCCCTT ATATCTAAATAGAAAAGCATGGAAAGCAGATCTTGATTCTTTCGGATTAAAAACAGACGGCTCACCTACGTGGCCCGCTC TTCAAGCAACGCAATACCAACTGGACAACTCAGAATCTCTACTATCCTTATTAACTACTCTCTTCTCTATTGAGAGAAAA TTAAACAAACTCTACGTTTACGCTCATCTGACTCATGATCAGGATATTACAAATCAAGAAGGCATCGCAGATCTTAAATC TATCACGCATCTACATACCTTATTTGCCGAAGAAACCTCTTGGGTACAACCCGCTTTAACCAGCCTATCGGAATCTCTCA TTGCTCAGCACCTATCAGCTCCCTGTTTAGCTCCTTATAGATTCTATTTAGAGAAAATCTTTAGACTATCTATACACACA GGCACTCCTGGAGAAGAAAAAATTCTCGCTTCCGCCTTTACTCCTCTTGAAGTAGCCAGTAAGGCATTTTCTTCTTTAAG TGACTCTGAAATTCCCTTTGGGCAAGCTACAGACTCAGAAGGAAACTCTCACCCGCTTTCTCATGCACTGGCTTCATTGT ATATGCAATCCACAGATCGGGAATTACGAAAAACATCCTACCTAGCACAATGTGAAAGATATCATAGTTACCGACATACC TTTGCTAACTTACTCAATGGGAAAATCCAAGCCCATGTATTTTACGCAAAAAATAAACGGTATAACTCCTGCTTACAAGC CGCGCTATACCACAATAATATCCCGACAACCGTGTACACAAACCTTATTGATATCGTGAAGAAAAATTCTTCACTAATCA CGAAGTACTTTTCCATCAAACAACGATGCTTAAATCTAAAAGATTTCCATTTTTATGATGTTTATGCTCCCCTAAGTCAG TCCAAAGAGAAAAAATATACGTTCCAAGAAGCTGTGGATCTTATCTATACTAGCCTTTCTCCTCTAGGAACGGAATACAT TGATACCTTAAAACAGGGGTTAACAACTCAAGGCTGGGTAGATAAATACGAAAATCTTAATAAACGCTCCGGAGCCTATT CTTCGGGATGTTACGATAGCCACCCTTATGTCCTCCTAAACTATACAGGCACCCTGTATGATGTATCCGTCATTGCCCAC GAAGGCGGACACAGTATGCACTCGTATTTTAGTAGGAAGCATCAACCTTTCCATGACGCTCAATATCCTATTTTCCTTGC TGAAATTGCTTCTACCTTAAATGAAATGCTTCTTATGGATTCCATGCTGAAGGAGAGCGACTCAAAAGAAGAGAAAATCA CCATTCTGACACGATGTTTGGATACCATCTTCTCTACACTATTCCGTCAGGTATTATTCGCCTCTTTTGAATACGATATT CATCACGCAGCAGAACATGGGGTTCCTCTAACTGAAGAATACCTATCCTCAACTTACAAGAATTTACAAAATGAGTTTTA CGGAGAAATTATCACATTTGATGTCCTGTCGAACATAGAATGGGCAAGAATTCCTCATTTCTATTACAATTTCTACGTAT ACCAATATGCAACGGGCATTATAGCCGCCCTGTGCTTTTTAGAAAAAATTCTTAACAACGAAGATAACGCTCTTAACTCC TATCTCAACTTTTTAAAAAGTGGTGGATCAGATTTCCCCTTAGAAATCTTAAAAAAATCAGGATTAGATATGGGCACAGT TGAGCCAATCCAAAAAGCTTTTTGCTTTATCGAGAAAAAAATCCAGGAGCTATCATCTTTAATTTGA
Upstream 100 bases:
>100_bases CATTTTAATCTACAGCAATGCGCGTGATCGTTCTTGGCTTTTTCTTAGAACTTATTTTATAGTAAGTTCTTTTTACTATT TCAAAAATCTATAGACTGTC
Downstream 100 bases:
>100_bases AACAACTAAAAAAAATGGCGCTTGATATTATTAAGTGCTAAAATCATTGCCAAAAACATGGGGCTCTGCTATCGTTTTCG AGAAACGGCAAAGTCTCTTA
Product: putative peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 608; Mature: 607
Protein sequence:
>608_residues MSVEFNKQQVRPRSEISPQDCWDITPLYLNRKAWKADLDSFGLKTDGSPTWPALQATQYQLDNSESLLSLLTTLFSIERK LNKLYVYAHLTHDQDITNQEGIADLKSITHLHTLFAEETSWVQPALTSLSESLIAQHLSAPCLAPYRFYLEKIFRLSIHT GTPGEEKILASAFTPLEVASKAFSSLSDSEIPFGQATDSEGNSHPLSHALASLYMQSTDRELRKTSYLAQCERYHSYRHT FANLLNGKIQAHVFYAKNKRYNSCLQAALYHNNIPTTVYTNLIDIVKKNSSLITKYFSIKQRCLNLKDFHFYDVYAPLSQ SKEKKYTFQEAVDLIYTSLSPLGTEYIDTLKQGLTTQGWVDKYENLNKRSGAYSSGCYDSHPYVLLNYTGTLYDVSVIAH EGGHSMHSYFSRKHQPFHDAQYPIFLAEIASTLNEMLLMDSMLKESDSKEEKITILTRCLDTIFSTLFRQVLFASFEYDI HHAAEHGVPLTEEYLSSTYKNLQNEFYGEIITFDVLSNIEWARIPHFYYNFYVYQYATGIIAALCFLEKILNNEDNALNS YLNFLKSGGSDFPLEILKKSGLDMGTVEPIQKAFCFIEKKIQELSSLI
Sequences:
>Translated_608_residues MSVEFNKQQVRPRSEISPQDCWDITPLYLNRKAWKADLDSFGLKTDGSPTWPALQATQYQLDNSESLLSLLTTLFSIERK LNKLYVYAHLTHDQDITNQEGIADLKSITHLHTLFAEETSWVQPALTSLSESLIAQHLSAPCLAPYRFYLEKIFRLSIHT GTPGEEKILASAFTPLEVASKAFSSLSDSEIPFGQATDSEGNSHPLSHALASLYMQSTDRELRKTSYLAQCERYHSYRHT FANLLNGKIQAHVFYAKNKRYNSCLQAALYHNNIPTTVYTNLIDIVKKNSSLITKYFSIKQRCLNLKDFHFYDVYAPLSQ SKEKKYTFQEAVDLIYTSLSPLGTEYIDTLKQGLTTQGWVDKYENLNKRSGAYSSGCYDSHPYVLLNYTGTLYDVSVIAH EGGHSMHSYFSRKHQPFHDAQYPIFLAEIASTLNEMLLMDSMLKESDSKEEKITILTRCLDTIFSTLFRQVLFASFEYDI HHAAEHGVPLTEEYLSSTYKNLQNEFYGEIITFDVLSNIEWARIPHFYYNFYVYQYATGIIAALCFLEKILNNEDNALNS YLNFLKSGGSDFPLEILKKSGLDMGTVEPIQKAFCFIEKKIQELSSLI >Mature_607_residues SVEFNKQQVRPRSEISPQDCWDITPLYLNRKAWKADLDSFGLKTDGSPTWPALQATQYQLDNSESLLSLLTTLFSIERKL NKLYVYAHLTHDQDITNQEGIADLKSITHLHTLFAEETSWVQPALTSLSESLIAQHLSAPCLAPYRFYLEKIFRLSIHTG TPGEEKILASAFTPLEVASKAFSSLSDSEIPFGQATDSEGNSHPLSHALASLYMQSTDRELRKTSYLAQCERYHSYRHTF ANLLNGKIQAHVFYAKNKRYNSCLQAALYHNNIPTTVYTNLIDIVKKNSSLITKYFSIKQRCLNLKDFHFYDVYAPLSQS KEKKYTFQEAVDLIYTSLSPLGTEYIDTLKQGLTTQGWVDKYENLNKRSGAYSSGCYDSHPYVLLNYTGTLYDVSVIAHE GGHSMHSYFSRKHQPFHDAQYPIFLAEIASTLNEMLLMDSMLKESDSKEEKITILTRCLDTIFSTLFRQVLFASFEYDIH HAAEHGVPLTEEYLSSTYKNLQNEFYGEIITFDVLSNIEWARIPHFYYNFYVYQYATGIIAALCFLEKILNNEDNALNSY LNFLKSGGSDFPLEILKKSGLDMGTVEPIQKAFCFIEKKIQELSSLI
Specific function: Unknown
COG id: COG1164
COG function: function code E; Oligoendopeptidase F
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 - InterPro: IPR004438 - InterPro: IPR013647 [H]
Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]
EC number: NA
Molecular weight: Translated: 69544; Mature: 69413
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVEFNKQQVRPRSEISPQDCWDITPLYLNRKAWKADLDSFGLKTDGSPTWPALQATQYQ CCCCCCHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LDNSESLLSLLTTLFSIERKLNKLYVYAHLTHDQDITNQEGIADLKSITHLHTLFAEETS CCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH WVQPALTSLSESLIAQHLSAPCLAPYRFYLEKIFRLSIHTGTPGEEKILASAFTPLEVAS HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHH KAFSSLSDSEIPFGQATDSEGNSHPLSHALASLYMQSTDRELRKTSYLAQCERYHSYRHT HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FANLLNGKIQAHVFYAKNKRYNSCLQAALYHNNIPTTVYTNLIDIVKKNSSLITKYFSIK HHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHH QRCLNLKDFHFYDVYAPLSQSKEKKYTFQEAVDLIYTSLSPLGTEYIDTLKQGLTTQGWV HHHCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH DKYENLNKRSGAYSSGCYDSHPYVLLNYTGTLYDVSVIAHEGGHSMHSYFSRKHQPFHDA HHHHCCHHCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCC QYPIFLAEIASTLNEMLLMDSMLKESDSKEEKITILTRCLDTIFSTLFRQVLFASFEYDI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHAAEHGVPLTEEYLSSTYKNLQNEFYGEIITFDVLSNIEWARIPHFYYNFYVYQYATGI HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHH IAALCFLEKILNNEDNALNSYLNFLKSGGSDFPLEILKKSGLDMGTVEPIQKAFCFIEKK HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHH IQELSSLI HHHHHHCC >Mature Secondary Structure SVEFNKQQVRPRSEISPQDCWDITPLYLNRKAWKADLDSFGLKTDGSPTWPALQATQYQ CCCCCHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LDNSESLLSLLTTLFSIERKLNKLYVYAHLTHDQDITNQEGIADLKSITHLHTLFAEETS CCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH WVQPALTSLSESLIAQHLSAPCLAPYRFYLEKIFRLSIHTGTPGEEKILASAFTPLEVAS HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHH KAFSSLSDSEIPFGQATDSEGNSHPLSHALASLYMQSTDRELRKTSYLAQCERYHSYRHT HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FANLLNGKIQAHVFYAKNKRYNSCLQAALYHNNIPTTVYTNLIDIVKKNSSLITKYFSIK HHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHH QRCLNLKDFHFYDVYAPLSQSKEKKYTFQEAVDLIYTSLSPLGTEYIDTLKQGLTTQGWV HHHCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHH DKYENLNKRSGAYSSGCYDSHPYVLLNYTGTLYDVSVIAHEGGHSMHSYFSRKHQPFHDA HHHHCCHHCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCC QYPIFLAEIASTLNEMLLMDSMLKESDSKEEKITILTRCLDTIFSTLFRQVLFASFEYDI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHAAEHGVPLTEEYLSSTYKNLQNEFYGEIITFDVLSNIEWARIPHFYYNFYVYQYATGI HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHH IAALCFLEKILNNEDNALNSYLNFLKSGGSDFPLEILKKSGLDMGTVEPIQKAFCFIEKK HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHH IQELSSLI HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]