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The map label for this gene is oppC [H]

Identifier: 62185192

GI number: 62185192

Start: 654092

End: 654958

Strand: Direct

Name: oppC [H]

Synonym: CAB576

Alternate gene names: 62185192

Gene position: 654092-654958 (Clockwise)

Preceding gene: 62185191

Following gene: 62185193

Centisome position: 57.16

GC content: 40.72

Gene sequence:

>867_bases
TTGAAAAACTTCATGGACATTCCTTTAAACTCTTCTCAACCCACTCTATGGCAACGTATGACAGGAAATACCATGTTTAT
GGTAGGAGCTTCATTGCTAACCACCTTAATCATAGGAGCTGTTCTTCTTCCATGGATTTACCCTAATTACGAACAGACAT
CTCTAGAATACACCCTACAATCACCGGGAAGTATGTTTCCTTTTGGGACCGATTCTCTAGGGCGTTGCATGCTAGCAAGA
ACGGTTCAAGGTTTACGCCTGTCCCTGCTTATTGCGGTTACGGCCACCCTTATCGATGTCTTCGTAGGACTGTTTTGGTC
TACAGTAGCATTATCTTCAGGGAAAAAAGTGGCTTTCCTCATGATGCGCATGACGGAAATCTTATTTTCCATTCCTAGAA
TCCCCGTCATTATTCTTCTTCTTGTGATTTTTGATCACGGAATCCTTCCTTTGATTCTTGCTATGACACTGACGGGGTGG
ATACCTATAGCACGCATTATCTACGGACAATTTTTATTATTAGAAAATAAAGAATTTGTGCTTTCCGCAAAGACGATGAA
TGCCTCTACATTTCACATTCTCAGAAAACATTTACTTCCTAACACGCTCACTCCGATCATCTCCACATTGATCTTCACTA
TTCCTGGAGCCATTTATACAGAAGCGTTTATTAGTTTTTTAGGTTTAGGTATCCAACCTCCTCAAGCCAGTCTAGGAACA
TTAGTCAAAGAAGGTATCAACGCTATTGACTACTACCCATGGTTATTTTTCTTTCCCTCATTTTTCATGATTACACTCTC
GATAAGCTTTAACCTCATCGGGGAAGGAGCAAAAGCACTATTCATCGAGGAAAATTCTCATGGCTGA

Upstream 100 bases:

>100_bases
ATAAAAAAGTGAGTTTCTCTCAAGAAAGTGAACATCTCTAACACAATTCATAGCATTTAGGTGAAGAATAAACAGAAACT
AAAAGAAATAAATAAGGCTA

Downstream 100 bases:

>100_bases
TACCTTACTCAACATACAAAATCTTACGATAGCCTCAAACAATCCACGTAGATTGCTCATAGATAATCTCAGCCTTTCCA
TTAAAAAACGGCATAGCCTA

Product: putative peptide ABC transport system permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKNFMDIPLNSSQPTLWQRMTGNTMFMVGASLLTTLIIGAVLLPWIYPNYEQTSLEYTLQSPGSMFPFGTDSLGRCMLAR
TVQGLRLSLLIAVTATLIDVFVGLFWSTVALSSGKKVAFLMMRMTEILFSIPRIPVIILLLVIFDHGILPLILAMTLTGW
IPIARIIYGQFLLLENKEFVLSAKTMNASTFHILRKHLLPNTLTPIISTLIFTIPGAIYTEAFISFLGLGIQPPQASLGT
LVKEGINAIDYYPWLFFFPSFFMITLSISFNLIGEGAKALFIEENSHG

Sequences:

>Translated_288_residues
MKNFMDIPLNSSQPTLWQRMTGNTMFMVGASLLTTLIIGAVLLPWIYPNYEQTSLEYTLQSPGSMFPFGTDSLGRCMLAR
TVQGLRLSLLIAVTATLIDVFVGLFWSTVALSSGKKVAFLMMRMTEILFSIPRIPVIILLLVIFDHGILPLILAMTLTGW
IPIARIIYGQFLLLENKEFVLSAKTMNASTFHILRKHLLPNTLTPIISTLIFTIPGAIYTEAFISFLGLGIQPPQASLGT
LVKEGINAIDYYPWLFFFPSFFMITLSISFNLIGEGAKALFIEENSHG
>Mature_288_residues
MKNFMDIPLNSSQPTLWQRMTGNTMFMVGASLLTTLIIGAVLLPWIYPNYEQTSLEYTLQSPGSMFPFGTDSLGRCMLAR
TVQGLRLSLLIAVTATLIDVFVGLFWSTVALSSGKKVAFLMMRMTEILFSIPRIPVIILLLVIFDHGILPLILAMTLTGW
IPIARIIYGQFLLLENKEFVLSAKTMNASTFHILRKHLLPNTLTPIISTLIFTIPGAIYTEAFISFLGLGIQPPQASLGT
LVKEGINAIDYYPWLFFFPSFFMITLSISFNLIGEGAKALFIEENSHG

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=285, Percent_Identity=35.4385964912281, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1787054, Length=264, Percent_Identity=29.9242424242424, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1787760, Length=265, Percent_Identity=27.1698113207547, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1788505, Length=219, Percent_Identity=27.8538812785388, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1789964, Length=246, Percent_Identity=27.2357723577236, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1789889, Length=247, Percent_Identity=24.2914979757085, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787549, Length=275, Percent_Identity=25.4545454545455, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32040; Mature: 32040

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFMDIPLNSSQPTLWQRMTGNTMFMVGASLLTTLIIGAVLLPWIYPNYEQTSLEYTLQ
CCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
SPGSMFPFGTDSLGRCMLARTVQGLRLSLLIAVTATLIDVFVGLFWSTVALSSGKKVAFL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
MMRMTEILFSIPRIPVIILLLVIFDHGILPLILAMTLTGWIPIARIIYGQFLLLENKEFV
HHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEE
LSAKTMNASTFHILRKHLLPNTLTPIISTLIFTIPGAIYTEAFISFLGLGIQPPQASLGT
EEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHH
LVKEGINAIDYYPWLFFFPSFFMITLSISFNLIGEGAKALFIEENSHG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCC
>Mature Secondary Structure
MKNFMDIPLNSSQPTLWQRMTGNTMFMVGASLLTTLIIGAVLLPWIYPNYEQTSLEYTLQ
CCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
SPGSMFPFGTDSLGRCMLARTVQGLRLSLLIAVTATLIDVFVGLFWSTVALSSGKKVAFL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
MMRMTEILFSIPRIPVIILLLVIFDHGILPLILAMTLTGWIPIARIIYGQFLLLENKEFV
HHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEE
LSAKTMNASTFHILRKHLLPNTLTPIISTLIFTIPGAIYTEAFISFLGLGIQPPQASLGT
EEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHH
LVKEGINAIDYYPWLFFFPSFFMITLSISFNLIGEGAKALFIEENSHG
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]