| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185181
Identifier: 62185181
GI number: 62185181
Start: 640014
End: 641312
Strand: Direct
Name: 62185181
Synonym: CAB564
Alternate gene names: NA
Gene position: 640014-641312 (Clockwise)
Preceding gene: 62185178
Following gene: 62185185
Centisome position: 55.93
GC content: 40.8
Gene sequence:
>1299_bases ATGGATAAAAAACCTTTTAGTTTTATCATTCCCATTCTATTTAGAAAGAAAAATCACAACATTTTTCCTTGTATGGATAA AGAAACCCTAGACAATATTTATAAGCATTTCCGTTATCGTTTTTTTAAATTAAGTATTCTCCCTGCATTTTTAGGATTAT TGCTTATATGCACTCCTAATACACTGAACTATCAAGCTCCTAGTGTTATCCTTTCCGAGAGGATCTGCGGCAGCCTGCTC ATTCTCTTAGCATGTGTTTCTTTCTATAAGCGCTCTCTCCTGTGGTTCGGTGTATTTGTAGGAACTTGGGTCTCTCTTTT TCCCTGTTTCCCAGAACGCTCTTCTATCGTATTTGCAAACGATACTCTAATCGGTTTTGCTATCTTTGCTGTTGTCTGCA TTCCTCCTACACGTCCCGAAGCTTTAGAAGTCGGCCCAACTCTACCTGAAGGGATTTCCTATAACCCATCTTCTGGAGGA CGTCGCGCTGCTGTTTTGATATTAAGTTTATTAGCCTGGCTACAGTCACGTTATTTAACAGCATCTGCCTTAGGAATATC CTCCAGTAGTTTTGAGTGCAGCTTCTTTGTTTATGCCATGATGATGACTGCCTATTCTTTACTTGTTGTACTCTCTCTGT CCGGAGGAGAGCGTCGTTGGCATACACGTCCTAAAGTCGTCATAGCCACAGCCATTACCCTCCTATCTACCATCATTCTC ACTTTCATTCCTATTGTCACGCAACAACTCACCCTAGATTGCTGGCTATGCTTATGTCTCACCTTACAACCTGGTTTGGC GTTTGTTTTCGCTTACGATGAATTCAGAGCCACATTTACCTATCTAGCACGATTCCTCGGTAAAAAACGCGAGCTTATTC GTATATCTCTCTTTGGATCAGAATACTATAGGGATTCCCTCTTTTGGGAAGAACGCACCGTCTTGCCCTTTATCAAAGCA TGCAAGCAAGCTTTTCAGGGTATTTCCTTTCCTATCCACCTTCTGATTACTATTGGCGTAACTATAGGATTTATCAAAAT GAGCGATGAACTCGCCATTACAAATACATGGAAAAACTACACGAATATCTGCTGTTGGTTCATTATTGTTCTCTCTACTC TATCTTTTGCCGATAGTCTTCGGCACTTGCGCTGGCTCTGTGTGATTTTTTCAGCAGCGATCTTACTCTCTCCTGTGTTC TTTCATATTCCCCTACATGCGCCAGTCTTGATTCCTACCATAATCACAGGAATTGCTTTGATCTTTTTATCCGTAGGGAA AATACTACAAAAAAAGTAA
Upstream 100 bases:
>100_bases ACACAGAACTCAGAAATAAAATAAAAAAATAAAAATTGAAAACTATTTTTTGTCCAAAGAAGTCTAGCTCTCTCTTGTTT CTATATGGAGATATGTCCAC
Downstream 100 bases:
>100_bases GACGAGAGTCTGATTATGTGAGTAAAGGAGAAACTCCTAAAGACGCTTCTTCTTCTTGCCTTTGCTCTGCAGCTCGCGCT TCTTCCTCGGCTTCCAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MDKKPFSFIIPILFRKKNHNIFPCMDKETLDNIYKHFRYRFFKLSILPAFLGLLLICTPNTLNYQAPSVILSERICGSLL ILLACVSFYKRSLLWFGVFVGTWVSLFPCFPERSSIVFANDTLIGFAIFAVVCIPPTRPEALEVGPTLPEGISYNPSSGG RRAAVLILSLLAWLQSRYLTASALGISSSSFECSFFVYAMMMTAYSLLVVLSLSGGERRWHTRPKVVIATAITLLSTIIL TFIPIVTQQLTLDCWLCLCLTLQPGLAFVFAYDEFRATFTYLARFLGKKRELIRISLFGSEYYRDSLFWEERTVLPFIKA CKQAFQGISFPIHLLITIGVTIGFIKMSDELAITNTWKNYTNICCWFIIVLSTLSFADSLRHLRWLCVIFSAAILLSPVF FHIPLHAPVLIPTIITGIALIFLSVGKILQKK
Sequences:
>Translated_432_residues MDKKPFSFIIPILFRKKNHNIFPCMDKETLDNIYKHFRYRFFKLSILPAFLGLLLICTPNTLNYQAPSVILSERICGSLL ILLACVSFYKRSLLWFGVFVGTWVSLFPCFPERSSIVFANDTLIGFAIFAVVCIPPTRPEALEVGPTLPEGISYNPSSGG RRAAVLILSLLAWLQSRYLTASALGISSSSFECSFFVYAMMMTAYSLLVVLSLSGGERRWHTRPKVVIATAITLLSTIIL TFIPIVTQQLTLDCWLCLCLTLQPGLAFVFAYDEFRATFTYLARFLGKKRELIRISLFGSEYYRDSLFWEERTVLPFIKA CKQAFQGISFPIHLLITIGVTIGFIKMSDELAITNTWKNYTNICCWFIIVLSTLSFADSLRHLRWLCVIFSAAILLSPVF FHIPLHAPVLIPTIITGIALIFLSVGKILQKK >Mature_432_residues MDKKPFSFIIPILFRKKNHNIFPCMDKETLDNIYKHFRYRFFKLSILPAFLGLLLICTPNTLNYQAPSVILSERICGSLL ILLACVSFYKRSLLWFGVFVGTWVSLFPCFPERSSIVFANDTLIGFAIFAVVCIPPTRPEALEVGPTLPEGISYNPSSGG RRAAVLILSLLAWLQSRYLTASALGISSSSFECSFFVYAMMMTAYSLLVVLSLSGGERRWHTRPKVVIATAITLLSTIIL TFIPIVTQQLTLDCWLCLCLTLQPGLAFVFAYDEFRATFTYLARFLGKKRELIRISLFGSEYYRDSLFWEERTVLPFIKA CKQAFQGISFPIHLLITIGVTIGFIKMSDELAITNTWKNYTNICCWFIIVLSTLSFADSLRHLRWLCVIFSAAILLSPVF FHIPLHAPVLIPTIITGIALIFLSVGKILQKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48867; Mature: 48867
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKPFSFIIPILFRKKNHNIFPCMDKETLDNIYKHFRYRFFKLSILPAFLGLLLICTPN CCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TLNYQAPSVILSERICGSLLILLACVSFYKRSLLWFGVFVGTWVSLFPCFPERSSIVFAN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC DTLIGFAIFAVVCIPPTRPEALEVGPTLPEGISYNPSSGGRRAAVLILSLLAWLQSRYLT CHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ASALGISSSSFECSFFVYAMMMTAYSLLVVLSLSGGERRWHTRPKVVIATAITLLSTIIL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHH TFIPIVTQQLTLDCWLCLCLTLQPGLAFVFAYDEFRATFTYLARFLGKKRELIRISLFGS HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECC EYYRDSLFWEERTVLPFIKACKQAFQGISFPIHLLITIGVTIGFIKMSDELAITNTWKNY HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEECCCEEEEECCHHH TNICCWFIIVLSTLSFADSLRHLRWLCVIFSAAILLSPVFFHIPLHAPVLIPTIITGIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHH IFLSVGKILQKK HHHHHHHHHCCC >Mature Secondary Structure MDKKPFSFIIPILFRKKNHNIFPCMDKETLDNIYKHFRYRFFKLSILPAFLGLLLICTPN CCCCCHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TLNYQAPSVILSERICGSLLILLACVSFYKRSLLWFGVFVGTWVSLFPCFPERSSIVFAN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC DTLIGFAIFAVVCIPPTRPEALEVGPTLPEGISYNPSSGGRRAAVLILSLLAWLQSRYLT CHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ASALGISSSSFECSFFVYAMMMTAYSLLVVLSLSGGERRWHTRPKVVIATAITLLSTIIL HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHH TFIPIVTQQLTLDCWLCLCLTLQPGLAFVFAYDEFRATFTYLARFLGKKRELIRISLFGS HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECC EYYRDSLFWEERTVLPFIKACKQAFQGISFPIHLLITIGVTIGFIKMSDELAITNTWKNY HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEECCCEEEEECCHHH TNICCWFIIVLSTLSFADSLRHLRWLCVIFSAAILLSPVFFHIPLHAPVLIPTIITGIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHH IFLSVGKILQKK HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA