Definition | Tropheryma whipplei TW08/27, complete genome. |
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Accession | NC_004551 |
Length | 925,938 |
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The map label for this gene is mshA2 [H]
Identifier: 28572948
GI number: 28572948
Start: 914410
End: 915627
Strand: Direct
Name: mshA2 [H]
Synonym: TW807
Alternate gene names: 28572948
Gene position: 914410-915627 (Clockwise)
Preceding gene: 28572943
Following gene: 28572950
Centisome position: 98.75
GC content: 47.29
Gene sequence:
>1218_bases GTGACCCTTCGCATTGCCATGGTGTCAATGCACAGCCACCCCCTTGCGCAGCCTGGAACCAGTAATGCTGGGGGAATGAA TGTTTATATCACCGAGGTTGCAAAGCGTCTTGCTGAACTTGAATGCATGGTTGATCTTTTTACCCTATCTAATGAGGATT ATTCACAAGATATTTTTCGTGGCGTTAGACTAATTGGAATCAAACCGTCAGGACGGATTGGCCCACAGATGGTTGATATG TTGAATCATGTTCCGGGCTTTGCGCAGAAAATTCTCGAGCATGAGCCGTACGATATATTTCACTCACATTACTGGCTGAG CGGCATGGCCTCAGATATAGTGAGCTCGCAGCTTGATACGCCACATATTCTGAACATGCACACAATAGGTGCTGTCAAAA ACACCCTGCTAGCAGAGGGCGATGATCCAGAACCCCCCATTCGACTTGAGAGCGAGAAACGCCTGGCCAGGAAGGTCTCA AAAGTTATCACATCCACCCTGACCGAAGCGTCGGCTGTTTCGAGATATTACGGAATAAGATTCGAAAATATTGCGGTTGT ATCGCCGGGTGTTGATACTACAGTTTTTTACCCGAAGGGAAATTGCACTCAAGAAAATGAAGGGGGTAATCATCTTTGGG CCCCGGTTGCGACCAATCCAGCGGGGTTTTTAGCTGTTCTTTCCAGAATCCAGCCACTAAAAGGGCAAGACCTGGCTATC CGCACTTTGGCGAGCTTGCGTAAAATCATGTTTGATAAATGCCCAAGCCTGATCATTGCGGGTGATCAATCTGAGAAATA CAACAACTATGCTGCATCGCTGCGGCGCATGGCATTGGACCTACAAGTTGAGGATCTTGTGCATTTTACCGGAGTCATAA GCCGCAAGCAGGTTGCTATGGTTATGCGAAACGCACAACTTCTCCTCGTTCCATCGCATTCGGAAACATTTGGTCTCGTA ACTCTGGAGGCCGCTGCAAGTGGGACGCCGGTTGTCGCAAGTCTAACAGATGGACTTATTGATGCGATTGTTCCGAACAT AACTGGAATTCTCATTGCCGAGCGAAATCCCGATATTTGGGCAAAAAATATTGCCAATCTGCTTATGAATAAGAACAGAC ACAAGTCTTTATCACGGTCCTCTGTCAGGCATGCACAAGACCACGACTGGACAAAAACAGCGGCCCAAATACTAAGTCTT TACCACCAGTTCGTATAA
Upstream 100 bases:
>100_bases GCAGGGCCAGGCCATACGCAGTACACCGAATCGAAATGTACAGACAGCAGGCGCTGAAGAAATGGAGACTAAAACACATG TTGCGTATGCGAGTTGAGCG
Downstream 100 bases:
>100_bases GGCGCGCCAGGCGGTTAGGCAATACACCTGTACGCCTCCAAATCTGGAACTGAGTACCCTTCCCCGGATACGACCTGAAT TTTTGCCCTCTTTGAATTTG
Product: glycosyltransferase
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase 2; GlcNAc-Ins-P N-acetylglucosaminyltransferase 2 [H]
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MTLRIAMVSMHSHPLAQPGTSNAGGMNVYITEVAKRLAELECMVDLFTLSNEDYSQDIFRGVRLIGIKPSGRIGPQMVDM LNHVPGFAQKILEHEPYDIFHSHYWLSGMASDIVSSQLDTPHILNMHTIGAVKNTLLAEGDDPEPPIRLESEKRLARKVS KVITSTLTEASAVSRYYGIRFENIAVVSPGVDTTVFYPKGNCTQENEGGNHLWAPVATNPAGFLAVLSRIQPLKGQDLAI RTLASLRKIMFDKCPSLIIAGDQSEKYNNYAASLRRMALDLQVEDLVHFTGVISRKQVAMVMRNAQLLLVPSHSETFGLV TLEAAASGTPVVASLTDGLIDAIVPNITGILIAERNPDIWAKNIANLLMNKNRHKSLSRSSVRHAQDHDWTKTAAQILSL YHQFV
Sequences:
>Translated_405_residues MTLRIAMVSMHSHPLAQPGTSNAGGMNVYITEVAKRLAELECMVDLFTLSNEDYSQDIFRGVRLIGIKPSGRIGPQMVDM LNHVPGFAQKILEHEPYDIFHSHYWLSGMASDIVSSQLDTPHILNMHTIGAVKNTLLAEGDDPEPPIRLESEKRLARKVS KVITSTLTEASAVSRYYGIRFENIAVVSPGVDTTVFYPKGNCTQENEGGNHLWAPVATNPAGFLAVLSRIQPLKGQDLAI RTLASLRKIMFDKCPSLIIAGDQSEKYNNYAASLRRMALDLQVEDLVHFTGVISRKQVAMVMRNAQLLLVPSHSETFGLV TLEAAASGTPVVASLTDGLIDAIVPNITGILIAERNPDIWAKNIANLLMNKNRHKSLSRSSVRHAQDHDWTKTAAQILSL YHQFV >Mature_404_residues TLRIAMVSMHSHPLAQPGTSNAGGMNVYITEVAKRLAELECMVDLFTLSNEDYSQDIFRGVRLIGIKPSGRIGPQMVDML NHVPGFAQKILEHEPYDIFHSHYWLSGMASDIVSSQLDTPHILNMHTIGAVKNTLLAEGDDPEPPIRLESEKRLARKVSK VITSTLTEASAVSRYYGIRFENIAVVSPGVDTTVFYPKGNCTQENEGGNHLWAPVATNPAGFLAVLSRIQPLKGQDLAIR TLASLRKIMFDKCPSLIIAGDQSEKYNNYAASLRRMALDLQVEDLVHFTGVISRKQVAMVMRNAQLLLVPSHSETFGLVT LEAAASGTPVVASLTDGLIDAIVPNITGILIAERNPDIWAKNIANLLMNKNRHKSLSRSSVRHAQDHDWTKTAAQILSLY HQFV
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR017814 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.250 [H]
Molecular weight: Translated: 44626; Mature: 44495
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRIAMVSMHSHPLAQPGTSNAGGMNVYITEVAKRLAELECMVDLFTLSNEDYSQDIFR CEEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC GVRLIGIKPSGRIGPQMVDMLNHVPGFAQKILEHEPYDIFHSHYWLSGMASDIVSSQLDT CEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC PHILNMHTIGAVKNTLLAEGDDPEPPIRLESEKRLARKVSKVITSTLTEASAVSRYYGIR CCEECCHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE FENIAVVSPGVDTTVFYPKGNCTQENEGGNHLWAPVATNPAGFLAVLSRIQPLKGQDLAI ECCEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCHHH RTLASLRKIMFDKCPSLIIAGDQSEKYNNYAASLRRMALDLQVEDLVHFTGVISRKQVAM HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH VMRNAQLLLVPSHSETFGLVTLEAAASGTPVVASLTDGLIDAIVPNITGILIAERNPDIW HHCCCEEEEEECCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHCCCEEEEEECCCCCHH AKNIANLLMNKNRHKSLSRSSVRHAQDHDWTKTAAQILSLYHQFV HHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TLRIAMVSMHSHPLAQPGTSNAGGMNVYITEVAKRLAELECMVDLFTLSNEDYSQDIFR EEEEEEEEECCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHC GVRLIGIKPSGRIGPQMVDMLNHVPGFAQKILEHEPYDIFHSHYWLSGMASDIVSSQLDT CEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC PHILNMHTIGAVKNTLLAEGDDPEPPIRLESEKRLARKVSKVITSTLTEASAVSRYYGIR CCEECCHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE FENIAVVSPGVDTTVFYPKGNCTQENEGGNHLWAPVATNPAGFLAVLSRIQPLKGQDLAI ECCEEEECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCHHH RTLASLRKIMFDKCPSLIIAGDQSEKYNNYAASLRRMALDLQVEDLVHFTGVISRKQVAM HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH VMRNAQLLLVPSHSETFGLVTLEAAASGTPVVASLTDGLIDAIVPNITGILIAERNPDIW HHCCCEEEEEECCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHCCCEEEEEECCCCCHH AKNIANLLMNKNRHKSLSRSSVRHAQDHDWTKTAAQILSLYHQFV HHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA