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The map label for this gene is ssb [H]

Identifier: 23501980

GI number: 23501980

Start: 1076137

End: 1076643

Strand: Reverse

Name: ssb [H]

Synonym: BR1102

Alternate gene names: 23501980

Gene position: 1076643-1076137 (Counterclockwise)

Preceding gene: 23501983

Following gene: 23501977

Centisome position: 51.08

GC content: 56.61

Gene sequence:

>507_bases
ATGGCTGGTAGCGTCAACAAGGTCATTCTGGTCGGCAATCTTGGTGCAGATCCTGAAATTCGCCGCCTGAATTCCGGCGA
TATGGTTGCCAACCTGCGCATTGCAACCTCGGAAAGCTGGCGTGACCGCCAGACCGGCGAACGCAAGGATCGCACCGAAT
GGCACAGCGTCGTCATCTTCAATGAAAATCTCGCCAAGGTTGCCGAACAATATCTGAAGAAGGGCGCCAAGGTTTATATC
GAAGGCGCGCTCCAGACCCGCAAGTGGCAGGATCAAAACGGCAATGACCGTTATTCAACGGAAATCGTGCTGCAAAAATT
CCGTGGAGAGCTTCAAATGCTCGACAGCCGCAGCGAAGGCGGCGAGGGCCGTTCCTTCGGCGGTGGTGGCAACCGCAACC
AGATGTCGGATTATTCCGGCGGCGGTGGAGATTTCGGCTCATCCGGCCCATCTTCGGGCAGCAGCGGCGGTTTCTCGCGC
GATCTGGACGATGAAATTCCGTTCTGA

Upstream 100 bases:

>100_bases
TTATGGACGCAGTTGCGCCTGACCTTTCTTTTGGAAAGCGCCCCTTGTCTGGACGAAGACGTGTGGAAAAGGTGCGTGCA
AGACCCGGAGTAAGTTTTCG

Downstream 100 bases:

>100_bases
TCAGGTTTGACGGGCGCTTCGGCGCCCGCCCTTTTCAGCAGCGTCTGCTTTCGCATATTTTCCGAAAGCTGCCCCCACTT
TCGGGAGCGCGCTTCAGAGC

Product: single-stranded DNA-binding protein family

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MAGSVNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLAKVAEQYLKKGAKVYI
EGALQTRKWQDQNGNDRYSTEIVLQKFRGELQMLDSRSEGGEGRSFGGGGNRNQMSDYSGGGGDFGSSGPSSGSSGGFSR
DLDDEIPF

Sequences:

>Translated_168_residues
MAGSVNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLAKVAEQYLKKGAKVYI
EGALQTRKWQDQNGNDRYSTEIVLQKFRGELQMLDSRSEGGEGRSFGGGGNRNQMSDYSGGGGDFGSSGPSSGSSGGFSR
DLDDEIPF
>Mature_167_residues
AGSVNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIFNENLAKVAEQYLKKGAKVYIE
GALQTRKWQDQNGNDRYSTEIVLQKFRGELQMLDSRSEGGEGRSFGGGGNRNQMSDYSGGGGDFGSSGPSSGSSGGFSRD
LDDEIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=108, Percent_Identity=34.2592592592593, Blast_Score=75, Evalue=4e-14,
Organism=Escherichia coli, GI1790494, Length=175, Percent_Identity=47.4285714285714, Blast_Score=150, Evalue=5e-38,
Organism=Drosophila melanogaster, GI85725234, Length=100, Percent_Identity=35, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24647376, Length=100, Percent_Identity=35, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18371; Mature: 18240

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSVNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIF
CCCCCCEEEEEECCCCCHHHEECCCCCEEEEEEEECCCCCHHHCCCCCCCCCCEEEEEEE
NENLAKVAEQYLKKGAKVYIEGALQTRKWQDQNGNDRYSTEIVLQKFRGELQMLDSRSEG
CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
GEGRSFGGGGNRNQMSDYSGGGGDFGSSGPSSGSSGGFSRDLDDEIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGSVNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTEWHSVVIF
CCCCCEEEEEECCCCCHHHEECCCCCEEEEEEEECCCCCHHHCCCCCCCCCCEEEEEEE
NENLAKVAEQYLKKGAKVYIEGALQTRKWQDQNGNDRYSTEIVLQKFRGELQMLDSRSEG
CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
GEGRSFGGGGNRNQMSDYSGGGGDFGSSGPSSGSSGGFSRDLDDEIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8225607 [H]