| Definition | Brucella suis 1330 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004310 |
| Length | 2,107,794 |
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The map label for this gene is ycjX [H]
Identifier: 23501913
GI number: 23501913
Start: 999451
End: 1000911
Strand: Reverse
Name: ycjX [H]
Synonym: BR1034
Alternate gene names: 23501913
Gene position: 1000911-999451 (Counterclockwise)
Preceding gene: 23501914
Following gene: 23501912
Centisome position: 47.49
GC content: 58.8
Gene sequence:
>1461_bases TTGGCAAAACTGACCAGTTTCGGCGATGAAGCAAGGATCGCGCTGGATACGCTGACAGACCGGGCGACAGGCCTTCTTTC CCCATCGCTTCGATTGGGCGTTACCGGCCTTTCGCGCGCAGGCAAGACGGTTTTCATCAGTGCGCTTGTGCATAATCTGG TGCATGGCGGACGCCTGCCCATGTTCGAGGCTTATAAAGCCGGGCGCATTTCGCGGGCACTCCTCGAACCACAGCCGGAT GATGCCGTGCCGCGCTTTCAATATGAAGAGCACCTTTCGGCGCTGATCGACGAACGTATCTGGCCGGATTCCACACGCGC CATTTCGCAGTTGCGCCTTACGATTGAATATGAGACGGCTTCCGCCTGGGGGCGCTGGCTCTCGCCGGGGCGTCTTTCGG TCGATATTGTCGATTATCCCGGCGAATGGCTGCTTGATCTTCCCCTGCTTGGAAAAACCTATGCACAATTCAGCGCGGAT TCCTTTGCACTCGCCAACGAGCCGACGCACAGGGACCTTGCGGCTGCATGGCTGGCCGAGGCGAAGACGGTTGCCCCTTC CGAAAAGGCCGATGAACTGACCGCACAGCGCCTTGCCCGGTGCTTTACCGACTATCTGCGCGCAGGCAAAGCGGATGAGC GCGCGCTTTCCACCTTGCCGCCCGGCCGGTTTTTAATGCCGGGTGATCTGGACGGCTCGCCTGCACTCACCTTCGCGCCG CTACCCGACCTTGAGCCGGGTGATTTTAAATCCGGTTCGATGGCCGCCATGATGGAGCGGCGCTACGAAGCCTACAAAAC CTATGTCGTAAAGCCCTTTTTCCGCGAGCATATTGCACGTCTCGACCGGCAGATCGTTCTGATCGACGCGATGCAGGCGA TGAATGCTGGCGGCGCGGTCGTGGCCGATCTGGAGCGCGCCCTGACCGACATTCTATCCTGTTTCCGTCCCGGCAGGTCC AATCTGCTGACCGGCCTTATCCAGCGCCGCATTGGCCGCATTCTCGTCGCGGCAACGAAAGCCGATCATCTGCACCATGA AAGCCATGACCGCTTGCAAGCCATCGTGCGGCGATTGGTGGAACGCGCCATAGAGCGGGCCGATTTTTCAGGGGCGGATA TCGATGTGCTTGCCATGGCAGCGGTTCGCGCCACGCGGGAGGCCACAGTGACGGAGGGTAACGAAACCCTGCCCGTTATT GTCGGCACACCTTTGAAGGGGGAGCGCATTGATGGAGAAGTCTTCGATGGTGAAACAGAAACAGCTATATTCCCCGGTGA TTTACCAAAAAATCCTAATGTAATTTTTGACCCTGCATTGTCACAGGATGAACCGGCAATCCGTTTCGTTCGGTTCCGCC CGCCCAGGCTGGAGCGAACCGCCGAAGGCGTAACCTTGTCCTTGCCGCATATTCGGCTCGACCGGGCGCTGCAATTCCTG ATTGGGGATCGTCTGGCATGA
Upstream 100 bases:
>100_bases CACATTGAAAATGTTGCGGTGCTGAAACGGTTTCCTTGCCAAATTCAACCCAGTGTCCCTATCTATTACGTGACACCGCA GCAATTTCGGCGAGGGCATA
Downstream 100 bases:
>100_bases GTGACAAGACACCACGCAAACCAACTGCCTTCAGGCTGGAACAACCGGCAAGAGTTTCTGCCGCCTCAGAGCAGGAGGAG CCAAGGCGCCCGCGCGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MAKLTSFGDEARIALDTLTDRATGLLSPSLRLGVTGLSRAGKTVFISALVHNLVHGGRLPMFEAYKAGRISRALLEPQPD DAVPRFQYEEHLSALIDERIWPDSTRAISQLRLTIEYETASAWGRWLSPGRLSVDIVDYPGEWLLDLPLLGKTYAQFSAD SFALANEPTHRDLAAAWLAEAKTVAPSEKADELTAQRLARCFTDYLRAGKADERALSTLPPGRFLMPGDLDGSPALTFAP LPDLEPGDFKSGSMAAMMERRYEAYKTYVVKPFFREHIARLDRQIVLIDAMQAMNAGGAVVADLERALTDILSCFRPGRS NLLTGLIQRRIGRILVAATKADHLHHESHDRLQAIVRRLVERAIERADFSGADIDVLAMAAVRATREATVTEGNETLPVI VGTPLKGERIDGEVFDGETETAIFPGDLPKNPNVIFDPALSQDEPAIRFVRFRPPRLERTAEGVTLSLPHIRLDRALQFL IGDRLA
Sequences:
>Translated_486_residues MAKLTSFGDEARIALDTLTDRATGLLSPSLRLGVTGLSRAGKTVFISALVHNLVHGGRLPMFEAYKAGRISRALLEPQPD DAVPRFQYEEHLSALIDERIWPDSTRAISQLRLTIEYETASAWGRWLSPGRLSVDIVDYPGEWLLDLPLLGKTYAQFSAD SFALANEPTHRDLAAAWLAEAKTVAPSEKADELTAQRLARCFTDYLRAGKADERALSTLPPGRFLMPGDLDGSPALTFAP LPDLEPGDFKSGSMAAMMERRYEAYKTYVVKPFFREHIARLDRQIVLIDAMQAMNAGGAVVADLERALTDILSCFRPGRS NLLTGLIQRRIGRILVAATKADHLHHESHDRLQAIVRRLVERAIERADFSGADIDVLAMAAVRATREATVTEGNETLPVI VGTPLKGERIDGEVFDGETETAIFPGDLPKNPNVIFDPALSQDEPAIRFVRFRPPRLERTAEGVTLSLPHIRLDRALQFL IGDRLA >Mature_485_residues AKLTSFGDEARIALDTLTDRATGLLSPSLRLGVTGLSRAGKTVFISALVHNLVHGGRLPMFEAYKAGRISRALLEPQPDD AVPRFQYEEHLSALIDERIWPDSTRAISQLRLTIEYETASAWGRWLSPGRLSVDIVDYPGEWLLDLPLLGKTYAQFSADS FALANEPTHRDLAAAWLAEAKTVAPSEKADELTAQRLARCFTDYLRAGKADERALSTLPPGRFLMPGDLDGSPALTFAPL PDLEPGDFKSGSMAAMMERRYEAYKTYVVKPFFREHIARLDRQIVLIDAMQAMNAGGAVVADLERALTDILSCFRPGRSN LLTGLIQRRIGRILVAATKADHLHHESHDRLQAIVRRLVERAIERADFSGADIDVLAMAAVRATREATVTEGNETLPVIV GTPLKGERIDGEVFDGETETAIFPGDLPKNPNVIFDPALSQDEPAIRFVRFRPPRLERTAEGVTLSLPHIRLDRALQFLI GDRLA
Specific function: Unknown
COG id: COG3106
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_1637 [H]
Homologues:
Organism=Escherichia coli, GI1787581, Length=483, Percent_Identity=36.8530020703934, Blast_Score=281, Evalue=5e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007413 [H]
Pfam domain/function: PF04317 DUF463 [H]
EC number: NA
Molecular weight: Translated: 53662; Mature: 53531
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLTSFGDEARIALDTLTDRATGLLSPSLRLGVTGLSRAGKTVFISALVHNLVHGGRLP CCCCCCCCCCCEEEHHHHHHHHHHCCCCCHHCCCHHHHHCCHHHHHHHHHHHHHCCCCCC MFEAYKAGRISRALLEPQPDDAVPRFQYEEHLSALIDERIWPDSTRAISQLRLTIEYETA HHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHEEEEEEEECH SAWGRWLSPGRLSVDIVDYPGEWLLDLPLLGKTYAQFSADSFALANEPTHRDLAAAWLAE HHHHHCCCCCCEEEEEEECCCCEEEECCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHH AKTVAPSEKADELTAQRLARCFTDYLRAGKADERALSTLPPGRFLMPGDLDGSPALTFAP HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEECCCCCCCCCCEEECC LPDLEPGDFKSGSMAAMMERRYEAYKTYVVKPFFREHIARLDRQIVLIDAMQAMNAGGAV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEHHHHHCCCCHH VADLERALTDILSCFRPGRSNLLTGLIQRRIGRILVAATKADHLHHESHDRLQAIVRRLV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECHHHHHCCCCHHHHHHHHHHHH ERAIERADFSGADIDVLAMAAVRATREATVTEGNETLPVIVGTPLKGERIDGEVFDGETE HHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCCCCCCEEECCCCC TAIFPGDLPKNPNVIFDPALSQDEPAIRFVRFRPPRLERTAEGVTLSLPHIRLDRALQFL CEEECCCCCCCCCEEECCCCCCCCCCEEEEEECCCCHHHHHCCCEEECCCHHHHHHHHHH IGDRLA HHCCCC >Mature Secondary Structure AKLTSFGDEARIALDTLTDRATGLLSPSLRLGVTGLSRAGKTVFISALVHNLVHGGRLP CCCCCCCCCCEEEHHHHHHHHHHCCCCCHHCCCHHHHHCCHHHHHHHHHHHHHCCCCCC MFEAYKAGRISRALLEPQPDDAVPRFQYEEHLSALIDERIWPDSTRAISQLRLTIEYETA HHHHHHHCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHEEEEEEEECH SAWGRWLSPGRLSVDIVDYPGEWLLDLPLLGKTYAQFSADSFALANEPTHRDLAAAWLAE HHHHHCCCCCCEEEEEEECCCCEEEECCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHH AKTVAPSEKADELTAQRLARCFTDYLRAGKADERALSTLPPGRFLMPGDLDGSPALTFAP HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEECCCCCCCCCCEEECC LPDLEPGDFKSGSMAAMMERRYEAYKTYVVKPFFREHIARLDRQIVLIDAMQAMNAGGAV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEHHHHHCCCCHH VADLERALTDILSCFRPGRSNLLTGLIQRRIGRILVAATKADHLHHESHDRLQAIVRRLV HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECHHHHHCCCCHHHHHHHHHHHH ERAIERADFSGADIDVLAMAAVRATREATVTEGNETLPVIVGTPLKGERIDGEVFDGETE HHHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCCCCCCEEECCCCC TAIFPGDLPKNPNVIFDPALSQDEPAIRFVRFRPPRLERTAEGVTLSLPHIRLDRALQFL CEEECCCCCCCCCEEECCCCCCCCCCEEEEEECCCCHHHHHCCCEEECCCHHHHHHHHHH IGDRLA HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]