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The map label for this gene is ycjF [C]

Identifier: 23501912

GI number: 23501912

Start: 998381

End: 999454

Strand: Reverse

Name: ycjF [C]

Synonym: BR1033

Alternate gene names: 23501912

Gene position: 999454-998381 (Counterclockwise)

Preceding gene: 23501913

Following gene: 23501911

Centisome position: 47.42

GC content: 59.5

Gene sequence:

>1074_bases
ATGAGTGACAAGACACCACGCAAACCAACTGCCTTCAGGCTGGAACAACCGGCAAGAGTTTCTGCCGCCTCAGAGCAGGA
GGAGCCAAGGCGCCCGCGCGCTGTGAAGGATCTGGAGCAAATCACTCCACAGGCTGATGTTTTCGATCTGACGGACGATG
AGGCGGCAGAGCTTGAAATCCTCGATCCCGCCTTTGAAGCGCCGGAGCGCAAGGGCTGGTCGCTCAGCCGGATATTGTTC
GGCGCGCTCGGCATTCTTGTTTCCTTCGCCATCGGCATCTGGACGGAAGACCTGATCCGCGCGCTTTTTGCGCGAGCCGA
CTGGCTTGGCTGGACGGCACTTGGTGTGGCGATGGTAGCCCTTGCTGCTTTCGCTGCAATCATCTTGCGGGAACTGGTGG
CCTTGCGGCGGCTTGCATCGGTCCAGCACTTGCGCAAGGACGCTGCCGATGCAGCCGAGCGCGACGATATGGCGGCGGCA
CGCAAGGCGGTGGATGCATTGCGGACGATCGCGGCAGGCATTCCAGAGACGGCGAAGGGGCGACAATTGCTCGACAGCCT
GACGGATGACATCATAGACGGACGCGATCTCATTCGGCTTGCCGAAACCGAAATCCTGCGCCCACTCGACCGCGAAGCAC
GGACCCTTGTTCTCAATGCATCGAAACGTGTTTCCATCGTCACCGCCATCAGCCCGCGCGCACTCGTCGATATCGGTTAT
GTGATTTTTGAATCCGCCCGCCTCATCCGCAGGCTGTCCCAACTTTATGGCGGAAGGCCGGGTACGTTCGGTTTTATCAA
GCTTGCGCGGCGTGTCATTGCGCATCTGGCCGTTACCGGTACGATTGCGATGGGCGACAGCGTTATCCAGCAACTCGTCG
GCCATGGACTTGCCTCGCGGCTATCGGCCAAGCTTGGCGAAGGGGTCGTCAACGGATTGATGACGGCACGTATCGGAATT
GCGGCAATGGACGTGGTGCGCCCCTTCCCGTTCAATGCCGAAAAACGTCCGGGCATCGGTGATTTCATCGGCGATCTTGC
ACGGCTGAACAGCGACAGAAACGCCCGAAAATAA

Upstream 100 bases:

>100_bases
GCCCGCCCAGGCTGGAGCGAACCGCCGAAGGCGTAACCTTGTCCTTGCCGCATATTCGGCTCGACCGGGCGCTGCAATTC
CTGATTGGGGATCGTCTGGC

Downstream 100 bases:

>100_bases
GCGCCCGCCTCCGCTGAAATCAGCATCAGCCTGTTGCCGTGCAAACCAAGCATTAACCATTCGGTCCGATTATGAGCGAA
CAGATATTTACGTTGGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MSDKTPRKPTAFRLEQPARVSAASEQEEPRRPRAVKDLEQITPQADVFDLTDDEAAELEILDPAFEAPERKGWSLSRILF
GALGILVSFAIGIWTEDLIRALFARADWLGWTALGVAMVALAAFAAIILRELVALRRLASVQHLRKDAADAAERDDMAAA
RKAVDALRTIAAGIPETAKGRQLLDSLTDDIIDGRDLIRLAETEILRPLDREARTLVLNASKRVSIVTAISPRALVDIGY
VIFESARLIRRLSQLYGGRPGTFGFIKLARRVIAHLAVTGTIAMGDSVIQQLVGHGLASRLSAKLGEGVVNGLMTARIGI
AAMDVVRPFPFNAEKRPGIGDFIGDLARLNSDRNARK

Sequences:

>Translated_357_residues
MSDKTPRKPTAFRLEQPARVSAASEQEEPRRPRAVKDLEQITPQADVFDLTDDEAAELEILDPAFEAPERKGWSLSRILF
GALGILVSFAIGIWTEDLIRALFARADWLGWTALGVAMVALAAFAAIILRELVALRRLASVQHLRKDAADAAERDDMAAA
RKAVDALRTIAAGIPETAKGRQLLDSLTDDIIDGRDLIRLAETEILRPLDREARTLVLNASKRVSIVTAISPRALVDIGY
VIFESARLIRRLSQLYGGRPGTFGFIKLARRVIAHLAVTGTIAMGDSVIQQLVGHGLASRLSAKLGEGVVNGLMTARIGI
AAMDVVRPFPFNAEKRPGIGDFIGDLARLNSDRNARK
>Mature_356_residues
SDKTPRKPTAFRLEQPARVSAASEQEEPRRPRAVKDLEQITPQADVFDLTDDEAAELEILDPAFEAPERKGWSLSRILFG
ALGILVSFAIGIWTEDLIRALFARADWLGWTALGVAMVALAAFAAIILRELVALRRLASVQHLRKDAADAAERDDMAAAR
KAVDALRTIAAGIPETAKGRQLLDSLTDDIIDGRDLIRLAETEILRPLDREARTLVLNASKRVSIVTAISPRALVDIGYV
IFESARLIRRLSQLYGGRPGTFGFIKLARRVIAHLAVTGTIAMGDSVIQQLVGHGLASRLSAKLGEGVVNGLMTARIGIA
AMDVVRPFPFNAEKRPGIGDFIGDLARLNSDRNARK

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family

Homologues:

Organism=Escherichia coli, GI1787582, Length=297, Percent_Identity=26.9360269360269, Blast_Score=104, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1033_BRUSU (Q8G0Q5)

Other databases:

- EMBL:   AE014291
- RefSeq:   NP_698039.1
- GeneID:   1166706
- GenomeReviews:   AE014291_GR
- KEGG:   bms:BR1033
- NMPDR:   fig|204722.1.peg.996
- TIGR:   BR1033
- HOGENOM:   HBG466177
- OMA:   CRPLAFR
- ProtClustDB:   PRK05415
- BioCyc:   BSUI204722:BR_1033-MONOMER
- HAMAP:   MF_01085
- InterPro:   IPR021147
- InterPro:   IPR006507
- TIGRFAMs:   TIGR01620

Pfam domain/function: PF05128 DUF697

EC number: NA

Molecular weight: Translated: 38895; Mature: 38763

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd838988)-; HASH(0xd49b63c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKTPRKPTAFRLEQPARVSAASEQEEPRRPRAVKDLEQITPQADVFDLTDDEAAELEI
CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCEEE
LDPAFEAPERKGWSLSRILFGALGILVSFAIGIWTEDLIRALFARADWLGWTALGVAMVA
ECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAFAAIILRELVALRRLASVQHLRKDAADAAERDDMAAARKAVDALRTIAAGIPETAKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
RQLLDSLTDDIIDGRDLIRLAETEILRPLDREARTLVLNASKRVSIVTAISPRALVDIGY
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCHHHHHHHH
VIFESARLIRRLSQLYGGRPGTFGFIKLARRVIAHLAVTGTIAMGDSVIQQLVGHGLASR
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAKLGEGVVNGLMTARIGIAAMDVVRPFPFNAEKRPGIGDFIGDLARLNSDRNARK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure 
SDKTPRKPTAFRLEQPARVSAASEQEEPRRPRAVKDLEQITPQADVFDLTDDEAAELEI
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCEEE
LDPAFEAPERKGWSLSRILFGALGILVSFAIGIWTEDLIRALFARADWLGWTALGVAMVA
ECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAFAAIILRELVALRRLASVQHLRKDAADAAERDDMAAARKAVDALRTIAAGIPETAKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
RQLLDSLTDDIIDGRDLIRLAETEILRPLDREARTLVLNASKRVSIVTAISPRALVDIGY
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCCHHHHHHHH
VIFESARLIRRLSQLYGGRPGTFGFIKLARRVIAHLAVTGTIAMGDSVIQQLVGHGLASR
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAKLGEGVVNGLMTARIGIAAMDVVRPFPFNAEKRPGIGDFIGDLARLNSDRNARK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12271122