Click here to switch to the map view.

The map label for this gene is 23100894

Identifier: 23100894

GI number: 23100894

Start: 3576061

End: 3577233

Strand: Reverse

Name: 23100894

Synonym: OB3439

Alternate gene names: NA

Gene position: 3577233-3576061 (Counterclockwise)

Preceding gene: 23100897

Following gene: 23100893

Centisome position: 98.53

GC content: 39.13

Gene sequence:

>1173_bases
ATGTCGGAAGAAACCATTACAAGGATACATAGCGGAAACAAAGAGTATATTTTAATTGGAACAGCGCATGTTTCAAAAAA
CAGTGCTGAACAGGTAAAAGCAGTCATTGATGAAGAGCAGCCGGATGCGGTGTGTATCGAGCTTGATGCACAACGTTATC
AATCCGTGATGGAAGGTAACAAGTGGAAGGATACAGATATTTTCCAAGTTATTAAAGATAAAAAAGCGGTCATGTTATTG
ATGAACTTAGCCATCTCTTCTTTTCAAAAAAGGATGGCAAAACAATTTGGCATTCGTCCTGGGGAGGAAATGATTCAAGG
AATTGAATCAGCAAAAGAACATCATGCAAAATTAGTATTAGCCGATCGTGATATTCAGATTACATTTGCACGTATTTGGG
GAAATATTAATCTGAAAGGAAAAGCAATGTTAATGATGCAAGTCGTAGGTAGTATTTTTAGTAAAGAAGAGATTAGCGAG
CAAGAAATGGAAAAAATGAAGCAACAAGATACGATAAATGCTATGCTCAAGGAATTTACTGAATATTTCCCGGATTTGAA
GAAGCCTTTAATTGATGAGCGTGACCAATACCTGTCGCAAAAAATAAAAGAAGCTCCTGGAGAAAAAGTAGTAGCTGTAC
TAGGAGCGGCTCATGTTCCTGGAATAACAAAGGAAATTGAAAAGGAACATGACTTGAACAAATTAACGGAGCGACCGAAA
AAGTCGAAGGTTCCAAAAATCATAGGATGGTCGATTCCGATTGCGATTATCGCAATTATTGCTTATACCTTTATGGTGAA
TCCACAAGCTGGTTGGCAACAAACGTTGAGCTGGACCTTATGGAATGGATCACTCTCTGCAATCGGTGCAGCAGCGGCGT
TTGCCCATCCGTTGGCAATCCTAACTGCATTTGTCGCTGCTCCAATTACATCCTTGAATCCATTGCTTGCTGCCGGCTGG
TTTGCCGGATTTGTTCAAGCTTATATTAAGCGACCAAATGTTGGGGATTTTGATCAATTATCCGACGATGTCCACTCAGT
AAAAGGATTTTGGCAAAACAAGGTAACACGAATTTTACTTGTTGTTGTTCTAGCCAATTTAGGTAGCTCACTTGGAACGT
TTATCGGCGGAATTGATGTTGTTCGCGTATTTATTAATAACTTATTTGGTTAA

Upstream 100 bases:

>100_bases
ACATGCTAAATTTAGAAAATCAGGTGCAAGCAGGAATTATTCAAAAAACGAATGAAAAAACGATTCTCTCTATTTTATAT
TAGATAAGGAAGGTCCTACC

Downstream 100 bases:

>100_bases
CTTAATTTCATGGTAAGAATGGAGAAATAAACGTGGTTAGTAAGGTATGAAAAAAGTTCCTTCAAAGTGGAGGAACTTTT
TAATATCATAAGCAAACTAG

Product: pheromone shutdown protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSEETITRIHSGNKEYILIGTAHVSKNSAEQVKAVIDEEQPDAVCIELDAQRYQSVMEGNKWKDTDIFQVIKDKKAVMLL
MNLAISSFQKRMAKQFGIRPGEEMIQGIESAKEHHAKLVLADRDIQITFARIWGNINLKGKAMLMMQVVGSIFSKEEISE
QEMEKMKQQDTINAMLKEFTEYFPDLKKPLIDERDQYLSQKIKEAPGEKVVAVLGAAHVPGITKEIEKEHDLNKLTERPK
KSKVPKIIGWSIPIAIIAIIAYTFMVNPQAGWQQTLSWTLWNGSLSAIGAAAAFAHPLAILTAFVAAPITSLNPLLAAGW
FAGFVQAYIKRPNVGDFDQLSDDVHSVKGFWQNKVTRILLVVVLANLGSSLGTFIGGIDVVRVFINNLFG

Sequences:

>Translated_390_residues
MSEETITRIHSGNKEYILIGTAHVSKNSAEQVKAVIDEEQPDAVCIELDAQRYQSVMEGNKWKDTDIFQVIKDKKAVMLL
MNLAISSFQKRMAKQFGIRPGEEMIQGIESAKEHHAKLVLADRDIQITFARIWGNINLKGKAMLMMQVVGSIFSKEEISE
QEMEKMKQQDTINAMLKEFTEYFPDLKKPLIDERDQYLSQKIKEAPGEKVVAVLGAAHVPGITKEIEKEHDLNKLTERPK
KSKVPKIIGWSIPIAIIAIIAYTFMVNPQAGWQQTLSWTLWNGSLSAIGAAAAFAHPLAILTAFVAAPITSLNPLLAAGW
FAGFVQAYIKRPNVGDFDQLSDDVHSVKGFWQNKVTRILLVVVLANLGSSLGTFIGGIDVVRVFINNLFG
>Mature_389_residues
SEETITRIHSGNKEYILIGTAHVSKNSAEQVKAVIDEEQPDAVCIELDAQRYQSVMEGNKWKDTDIFQVIKDKKAVMLLM
NLAISSFQKRMAKQFGIRPGEEMIQGIESAKEHHAKLVLADRDIQITFARIWGNINLKGKAMLMMQVVGSIFSKEEISEQ
EMEKMKQQDTINAMLKEFTEYFPDLKKPLIDERDQYLSQKIKEAPGEKVVAVLGAAHVPGITKEIEKEHDLNKLTERPKK
SKVPKIIGWSIPIAIIAIIAYTFMVNPQAGWQQTLSWTLWNGSLSAIGAAAAFAHPLAILTAFVAAPITSLNPLLAAGWF
AGFVQAYIKRPNVGDFDQLSDDVHSVKGFWQNKVTRILLVVVLANLGSSLGTFIGGIDVVRVFINNLFG

Specific function: Unknown

COG id: COG1916

COG function: function code S; Uncharacterized homolog of PrgY (pheromone shutdown protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI33342278, Length=212, Percent_Identity=28.7735849056604, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71988206, Length=275, Percent_Identity=26.9090909090909, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI71988217, Length=275, Percent_Identity=26.9090909090909, Blast_Score=102, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002816
- InterPro:   IPR005230 [H]

Pfam domain/function: PF01963 TraB [H]

EC number: NA

Molecular weight: Translated: 43434; Mature: 43303

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEETITRIHSGNKEYILIGTAHVSKNSAEQVKAVIDEEQPDAVCIELDAQRYQSVMEGN
CCCHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCC
KWKDTDIFQVIKDKKAVMLLMNLAISSFQKRMAKQFGIRPGEEMIQGIESAKEHHAKLVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEE
ADRDIQITFARIWGNINLKGKAMLMMQVVGSIFSKEEISEQEMEKMKQQDTINAMLKEFT
ECCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EYFPDLKKPLIDERDQYLSQKIKEAPGEKVVAVLGAAHVPGITKEIEKEHDLNKLTERPK
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH
KSKVPKIIGWSIPIAIIAIIAYTFMVNPQAGWQQTLSWTLWNGSLSAIGAAAAFAHPLAI
HCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHHH
LTAFVAAPITSLNPLLAAGWFAGFVQAYIKRPNVGDFDQLSDDVHSVKGFWQNKVTRILL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVVLANLGSSLGTFIGGIDVVRVFINNLFG
HHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEETITRIHSGNKEYILIGTAHVSKNSAEQVKAVIDEEQPDAVCIELDAQRYQSVMEGN
CCHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCC
KWKDTDIFQVIKDKKAVMLLMNLAISSFQKRMAKQFGIRPGEEMIQGIESAKEHHAKLVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEE
ADRDIQITFARIWGNINLKGKAMLMMQVVGSIFSKEEISEQEMEKMKQQDTINAMLKEFT
ECCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EYFPDLKKPLIDERDQYLSQKIKEAPGEKVVAVLGAAHVPGITKEIEKEHDLNKLTERPK
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCH
KSKVPKIIGWSIPIAIIAIIAYTFMVNPQAGWQQTLSWTLWNGSLSAIGAAAAFAHPLAI
HCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHHHH
LTAFVAAPITSLNPLLAAGWFAGFVQAYIKRPNVGDFDQLSDDVHSVKGFWQNKVTRILL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVVLANLGSSLGTFIGGIDVVRVFINNLFG
HHHHHHHCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]