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The map label for this gene is sgbU [C]

Identifier: 23100874

GI number: 23100874

Start: 3556941

End: 3557762

Strand: Reverse

Name: sgbU [C]

Synonym: OB3419

Alternate gene names: 23100874

Gene position: 3557762-3556941 (Counterclockwise)

Preceding gene: 23100875

Following gene: 23100873

Centisome position: 98.0

GC content: 34.67

Gene sequence:

>822_bases
ATGCGAAAAGGTATAAACCAATGGTGCTATCCCGAAGGTACTCCTATAGAAAAAGTTTTCTCATATAGTAATCAATCAAA
TTTTCATGCAGTTGAATTAAACCTTTCTATGAATGGCCCAGGATTAACAATGGAGACAACTTTGTCAGACGTGAGGAAAC
TAAAAGAATTAGCATCCAATTATTCTATTCAATTAAATAGTGTATCAACCGATTTGCTATGGAAATATCCACTCTCACAT
ACAGATAAAGTAATACGAGAAAAAGGCAGAGCTGTAATTGAAAAACAATTGGAATTTGCAGCTGAATTAGGGGCAAATAC
TATTCTTGTTGTCCCAGGTATCGTCAATGGAGAAACAAATTACAAGGATTGTTATGATAGGAGTCAAGAAGTAATAGGTA
AATTAATTCCACTAGCAGAAGAAAAGAATGTGACGATAGCTATCGAGAACGTGTGGAACAAGTTCTTATTGTCACCACTG
GAAATGGCAAGTTATGTTGATTCTTTTTCATCTAAGTACGTAGGTGTCTATTTTGATGTAGGAAACGTGCTGCAATTTGG
TTACCCAGAACAATGGATAGAGATATTATCTTATCGTATAAAAAAAGTCCATGTGAAAGATTTCGATACAAAGGTAGGAA
ATATTAGTGGTTTTGTACCTTTATTAGCTGGAGATGTTAATTGGAGAAGTGTGATCCAATCATTAAATGATATCGGTTAT
ATGGATACGTTGACAGCGGAATTAACTCCATATGACTTTGGTCCAGATTTGTTAGCAAGAGAAACATCTCGTAGTTTGGA
TATTATTATTGAAGCTGGCTAA

Upstream 100 bases:

>100_bases
GTGAGGATGGTTTAGAGGCTTTAGAGGTTGCTCTAGCTAGTTATGAATCTTCTAGTAGAAAACAACCAGTAGAGGTAAAT
TAGTTAGAAGGAGTGAAACA

Downstream 100 bases:

>100_bases
GGTAACTCTTTCTAAGCGGGAGTGACTAGTGAATGCGAAAAGCGATTCTTTTAATGTTGATTCTAATCATCTCCTTATTT
GGTTGCAGACAAGAAGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein; Hexulose-6-Phosphate Isomerase; Xylose Isomerase; Sugar Phosphate Isomerase/Epimerase

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MRKGINQWCYPEGTPIEKVFSYSNQSNFHAVELNLSMNGPGLTMETTLSDVRKLKELASNYSIQLNSVSTDLLWKYPLSH
TDKVIREKGRAVIEKQLEFAAELGANTILVVPGIVNGETNYKDCYDRSQEVIGKLIPLAEEKNVTIAIENVWNKFLLSPL
EMASYVDSFSSKYVGVYFDVGNVLQFGYPEQWIEILSYRIKKVHVKDFDTKVGNISGFVPLLAGDVNWRSVIQSLNDIGY
MDTLTAELTPYDFGPDLLARETSRSLDIIIEAG

Sequences:

>Translated_273_residues
MRKGINQWCYPEGTPIEKVFSYSNQSNFHAVELNLSMNGPGLTMETTLSDVRKLKELASNYSIQLNSVSTDLLWKYPLSH
TDKVIREKGRAVIEKQLEFAAELGANTILVVPGIVNGETNYKDCYDRSQEVIGKLIPLAEEKNVTIAIENVWNKFLLSPL
EMASYVDSFSSKYVGVYFDVGNVLQFGYPEQWIEILSYRIKKVHVKDFDTKVGNISGFVPLLAGDVNWRSVIQSLNDIGY
MDTLTAELTPYDFGPDLLARETSRSLDIIIEAG
>Mature_273_residues
MRKGINQWCYPEGTPIEKVFSYSNQSNFHAVELNLSMNGPGLTMETTLSDVRKLKELASNYSIQLNSVSTDLLWKYPLSH
TDKVIREKGRAVIEKQLEFAAELGANTILVVPGIVNGETNYKDCYDRSQEVIGKLIPLAEEKNVTIAIENVWNKFLLSPL
EMASYVDSFSSKYVGVYFDVGNVLQFGYPEQWIEILSYRIKKVHVKDFDTKVGNISGFVPLLAGDVNWRSVIQSLNDIGY
MDTLTAELTPYDFGPDLLARETSRSLDIIIEAG

Specific function: Isomerization Of D-Arabino-6-Hexulose 3-Phosphate To D-Fructose 6-Phosphate. [C]

COG id: COG3623

COG function: function code G; Putative L-xylulose-5-phosphate 3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.-.-.- [C]

Molecular weight: Translated: 30736; Mature: 30736

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGINQWCYPEGTPIEKVFSYSNQSNFHAVELNLSMNGPGLTMETTLSDVRKLKELASN
CCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCC
YSIQLNSVSTDLLWKYPLSHTDKVIREKGRAVIEKQLEFAAELGANTILVVPGIVNGETN
CEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEECCCCC
YKDCYDRSQEVIGKLIPLAEEKNVTIAIENVWNKFLLSPLEMASYVDSFSSKYVGVYFDV
HHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEC
GNVLQFGYPEQWIEILSYRIKKVHVKDFDTKVGNISGFVPLLAGDVNWRSVIQSLNDIGY
CCHHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCC
MDTLTAELTPYDFGPDLLARETSRSLDIIIEAG
HHHHHHCCCCCCCCHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure
MRKGINQWCYPEGTPIEKVFSYSNQSNFHAVELNLSMNGPGLTMETTLSDVRKLKELASN
CCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCC
YSIQLNSVSTDLLWKYPLSHTDKVIREKGRAVIEKQLEFAAELGANTILVVPGIVNGETN
CEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEECCCCC
YKDCYDRSQEVIGKLIPLAEEKNVTIAIENVWNKFLLSPLEMASYVDSFSSKYVGVYFDV
HHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEC
GNVLQFGYPEQWIEILSYRIKKVHVKDFDTKVGNISGFVPLLAGDVNWRSVIQSLNDIGY
CCHHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCC
MDTLTAELTPYDFGPDLLARETSRSLDIIIEAG
HHHHHHCCCCCCCCHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA