| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is yxjC [H]
Identifier: 23100085
GI number: 23100085
Start: 2697509
End: 2698792
Strand: Reverse
Name: yxjC [H]
Synonym: OB2630
Alternate gene names: 23100085
Gene position: 2698792-2697509 (Counterclockwise)
Preceding gene: 23100086
Following gene: 23100084
Centisome position: 74.34
GC content: 36.99
Gene sequence:
>1284_bases TTGCTTGGAATTATATTGGGTTTAATTGTTTTAATGGTATTAGCTTTTATGGGGTGGTCCATTATCTGGGTAGCTCCAAT TGCTGCAGGTATCGTTGCGCTAACGGGTGGATTGGATTTATTGGAAGCGTATACAGACACGTACATGAGCGGTTTTGTAG GGTTTGCTAAACAGTGGTTTCCTGTGTTCATGCTAAGTGCAATATTTGGTAAATTAATGGCAGATACAGGGATGGCGAAG TCGATTGCAATTAAATTAGCAAATTTAATTGGTACAAAACGAGCAATATTAGGAGTTTTATTAGCAGCAGCTGTTTTAAC GTATGGAGGCATTAGTTTATTTGTAGTAGTTTTTGCAATCTATCCTTTAGCAATTTCCTTGTTTAGAGAAGCGAATATAA GCAGAAAACTATTACCAGCTACGATTGCATTAGGCGCATTCACTTTTACTATGACAGCCCTACCAGGAACACCACAGATA CAAAACTTAATTCCTATACCTTATTTTGAGACAGATGCAATGGCCGCCCCAATCATGGGAATTGCTGCTGCAATTGTTAT GGCAGGAGGAGGGTACTATTATCTTATTTGGAGACAAAAACAATTAACTGCCAGGGGAGAAGTTTTTGTTGAACCAAAGG ATAAGACTGTATTTGAAGTTGATGGTGATATGCCAATTATTTGGTTATCTTTATTGCCATTAATTACCGTAATCGCCACA CTAAATTTATTAAAATGGGATATAGTTATCTCTTTACTTGCTGGAAATCTACTTATTCTATTATTGAATATCCATAAATT TAAAGGATTTTCTAAATCGATTAATGAAGGAGCCGTAAGTTCAGTAACTGCAATTATTAATACAAGTGCTGCAGTTGGGT TTGGTACCGTCGTCCAAGCAGTTCCTGGATTTGATAAGTTAACGAATATGTTACTAGGTATTCCTGGGAATCCTTTAATA TCTGAAGCAGTAGCTGTAAATATGTTAGCCGGTGCTACCGGTTCAGCTTCTGGCGGTATGGGAATAGCTTTAGAGGCATT AGGTCCTAAATATTATGAAATTGCTTTAAATATGGGAATTAGTCCGGAAGCTTTTCATCGTATTGCATCTTTAGCTTCGG GAGGTTTAGATGCTTTACCACATAATGGTGCCGTATTAACTGTTCTTACAATTACAGGTATGACACATAAAGACAGTTAT AAAGATATTGCAGTAGTAGCTGTAATTATTCCGATTATAGCAACAGCAGTAGCGATTGCTTTAGCTGCAATGGGGATATA TTAA
Upstream 100 bases:
>100_bases GCATTGGCTTTAGATGGCGGATATACAGTTCAGTAAAATTAAGAAAGCCTAATCACATAAAACGGTTTGTGATTAGGCTC ATTACAAGGGGGAAAAGGAA
Downstream 100 bases:
>100_bases GAATAGCTTTTTAAATTACTAAATTTAATTATATACTTGTAATAAATATTTAATTCTGGAGGGTATAATTGTTATGAAGC AACTCCCTAAAGAGTGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MLGIILGLIVLMVLAFMGWSIIWVAPIAAGIVALTGGLDLLEAYTDTYMSGFVGFAKQWFPVFMLSAIFGKLMADTGMAK SIAIKLANLIGTKRAILGVLLAAAVLTYGGISLFVVVFAIYPLAISLFREANISRKLLPATIALGAFTFTMTALPGTPQI QNLIPIPYFETDAMAAPIMGIAAAIVMAGGGYYYLIWRQKQLTARGEVFVEPKDKTVFEVDGDMPIIWLSLLPLITVIAT LNLLKWDIVISLLAGNLLILLLNIHKFKGFSKSINEGAVSSVTAIINTSAAVGFGTVVQAVPGFDKLTNMLLGIPGNPLI SEAVAVNMLAGATGSASGGMGIALEALGPKYYEIALNMGISPEAFHRIASLASGGLDALPHNGAVLTVLTITGMTHKDSY KDIAVVAVIIPIIATAVAIALAAMGIY
Sequences:
>Translated_427_residues MLGIILGLIVLMVLAFMGWSIIWVAPIAAGIVALTGGLDLLEAYTDTYMSGFVGFAKQWFPVFMLSAIFGKLMADTGMAK SIAIKLANLIGTKRAILGVLLAAAVLTYGGISLFVVVFAIYPLAISLFREANISRKLLPATIALGAFTFTMTALPGTPQI QNLIPIPYFETDAMAAPIMGIAAAIVMAGGGYYYLIWRQKQLTARGEVFVEPKDKTVFEVDGDMPIIWLSLLPLITVIAT LNLLKWDIVISLLAGNLLILLLNIHKFKGFSKSINEGAVSSVTAIINTSAAVGFGTVVQAVPGFDKLTNMLLGIPGNPLI SEAVAVNMLAGATGSASGGMGIALEALGPKYYEIALNMGISPEAFHRIASLASGGLDALPHNGAVLTVLTITGMTHKDSY KDIAVVAVIIPIIATAVAIALAAMGIY >Mature_427_residues MLGIILGLIVLMVLAFMGWSIIWVAPIAAGIVALTGGLDLLEAYTDTYMSGFVGFAKQWFPVFMLSAIFGKLMADTGMAK SIAIKLANLIGTKRAILGVLLAAAVLTYGGISLFVVVFAIYPLAISLFREANISRKLLPATIALGAFTFTMTALPGTPQI QNLIPIPYFETDAMAAPIMGIAAAIVMAGGGYYYLIWRQKQLTARGEVFVEPKDKTVFEVDGDMPIIWLSLLPLITVIAT LNLLKWDIVISLLAGNLLILLLNIHKFKGFSKSINEGAVSSVTAIINTSAAVGFGTVVQAVPGFDKLTNMLLGIPGNPLI SEAVAVNMLAGATGSASGGMGIALEALGPKYYEIALNMGISPEAFHRIASLASGGLDALPHNGAVLTVLTITGMTHKDSY KDIAVVAVIIPIIATAVAIALAAMGIY
Specific function: Unknown
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004680 [H]
Pfam domain/function: PF03600 CitMHS [H]
EC number: NA
Molecular weight: Translated: 44803; Mature: 44803
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGIILGLIVLMVLAFMGWSIIWVAPIAAGIVALTGGLDLLEAYTDTYMSGFVGFAKQWF CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH PVFMLSAIFGKLMADTGMAKSIAIKLANLIGTKRAILGVLLAAAVLTYGGISLFVVVFAI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YPLAISLFREANISRKLLPATIALGAFTFTMTALPGTPQIQNLIPIPYFETDAMAAPIMG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHH IAAAIVMAGGGYYYLIWRQKQLTARGEVFVEPKDKTVFEVDGDMPIIWLSLLPLITVIAT HHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHH LNLLKWDIVISLLAGNLLILLLNIHKFKGFSKSINEGAVSSVTAIINTSAAVGFGTVVQA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHH VPGFDKLTNMLLGIPGNPLISEAVAVNMLAGATGSASGGMGIALEALGPKYYEIALNMGI CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEEECCC SPEAFHRIASLASGGLDALPHNGAVLTVLTITGMTHKDSYKDIAVVAVIIPIIATAVAIA CHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH LAAMGIY HHHHCCC >Mature Secondary Structure MLGIILGLIVLMVLAFMGWSIIWVAPIAAGIVALTGGLDLLEAYTDTYMSGFVGFAKQWF CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH PVFMLSAIFGKLMADTGMAKSIAIKLANLIGTKRAILGVLLAAAVLTYGGISLFVVVFAI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH YPLAISLFREANISRKLLPATIALGAFTFTMTALPGTPQIQNLIPIPYFETDAMAAPIMG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHH IAAAIVMAGGGYYYLIWRQKQLTARGEVFVEPKDKTVFEVDGDMPIIWLSLLPLITVIAT HHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHH LNLLKWDIVISLLAGNLLILLLNIHKFKGFSKSINEGAVSSVTAIINTSAAVGFGTVVQA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCHHHHHHHHHHH VPGFDKLTNMLLGIPGNPLISEAVAVNMLAGATGSASGGMGIALEALGPKYYEIALNMGI CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCEEEEEEEECCC SPEAFHRIASLASGGLDALPHNGAVLTVLTITGMTHKDSYKDIAVVAVIIPIIATAVAIA CHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH LAAMGIY HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377; 10568751 [H]