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The map label for this gene is yurN [H]

Identifier: 23100008

GI number: 23100008

Start: 2607449

End: 2608342

Strand: Reverse

Name: yurN [H]

Synonym: OB2553

Alternate gene names: 23100008

Gene position: 2608342-2607449 (Counterclockwise)

Preceding gene: 23100009

Following gene: 23100007

Centisome position: 71.84

GC content: 34.12

Gene sequence:

>894_bases
ATGGTTCAGTCCAAAAAGCAAAAATATACATTTCTAGCTGTTTGTCTTCTCCCAACATTCATCATGTTTTGCATTTTTAC
ACTCTATCCATTGTTTAGTGGATTGTATTATTCATTTTTTGAATGGTCGGGTTCTTCTCAAGTCAAGACTTTTATTGGAC
TAGATAATTATATCCAATTATTTAATGATGTGATTGTCCCGGATACAATCGTTCATGATTATTTTTTAGTTGTTACAAAA
GTGATTGGAATTATGATAATGGCAATGTTCTTTGCAGTTGCACTTACACAATTAAAAATTAAAGAAGCACCTTTTTATCG
TATCGTGTTCTTTTTTCCGAATATTATGTCAGTAGTTGTAATAGGTATACTGTGGATGTTTATCTATAATCCAACCATGG
GGTTAGTCAATTCTGGATTAGAAATGCTAGGGTTAGGTGATTGGGCGAAACCATGGTTAGGAAGTGAAACATGGGCATTG
CCAAGCTTAGTTTTACCATCTATTTGGGCTGGTATTGGCTTATTTATGTTGATGTTAATGGGTGGTATATCCAATATATC
AAAAAGCTACTATGAAGCAGCTGATATGGATGGAGCAAGTGAATGGACAAAATTTTGGAAAGTAACCCTTCCATTAGTGT
GGCCACAAGTGAAGATATCCATTTTGTATATTGTGATTACGACGCTAAATGGTTCATTTGTTATTGTTCAGGTAATGACA
GGTGGGGGACCAAATAACTCTACCCATGTAATGGGATCCTATTTATATCAGCAAGCATTTGTACAATTTAATTTTGGTTA
CGGAGCTACAATTGGCGTAATGATTTTAGTATTATCGTTGATTACTGTATTGCTTTTACAGTTTGTCTTACGAAGAGATA
AAGTAGAATACTAG

Upstream 100 bases:

>100_bases
AGAGAAAGCGGCTGAAGCTTACCGATAGCATATGTGTGAATGAGGCTCGGACATTATTGTCCAGCCTCATTCAGTATATT
TTTAAGAAGAGAGTGGTTTG

Downstream 100 bases:

>100_bases
CTTAGCTGGGTGAGTAGAGGAGGTATTATTTTGAAGCGAAGTGTAGGACAAATATTGGGTAGAGCAGGAATACGTATCCC
TTTAATTCTTTGGAGTATAG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MVQSKKQKYTFLAVCLLPTFIMFCIFTLYPLFSGLYYSFFEWSGSSQVKTFIGLDNYIQLFNDVIVPDTIVHDYFLVVTK
VIGIMIMAMFFAVALTQLKIKEAPFYRIVFFFPNIMSVVVIGILWMFIYNPTMGLVNSGLEMLGLGDWAKPWLGSETWAL
PSLVLPSIWAGIGLFMLMLMGGISNISKSYYEAADMDGASEWTKFWKVTLPLVWPQVKISILYIVITTLNGSFVIVQVMT
GGGPNNSTHVMGSYLYQQAFVQFNFGYGATIGVMILVLSLITVLLLQFVLRRDKVEY

Sequences:

>Translated_297_residues
MVQSKKQKYTFLAVCLLPTFIMFCIFTLYPLFSGLYYSFFEWSGSSQVKTFIGLDNYIQLFNDVIVPDTIVHDYFLVVTK
VIGIMIMAMFFAVALTQLKIKEAPFYRIVFFFPNIMSVVVIGILWMFIYNPTMGLVNSGLEMLGLGDWAKPWLGSETWAL
PSLVLPSIWAGIGLFMLMLMGGISNISKSYYEAADMDGASEWTKFWKVTLPLVWPQVKISILYIVITTLNGSFVIVQVMT
GGGPNNSTHVMGSYLYQQAFVQFNFGYGATIGVMILVLSLITVLLLQFVLRRDKVEY
>Mature_297_residues
MVQSKKQKYTFLAVCLLPTFIMFCIFTLYPLFSGLYYSFFEWSGSSQVKTFIGLDNYIQLFNDVIVPDTIVHDYFLVVTK
VIGIMIMAMFFAVALTQLKIKEAPFYRIVFFFPNIMSVVVIGILWMFIYNPTMGLVNSGLEMLGLGDWAKPWLGSETWAL
PSLVLPSIWAGIGLFMLMLMGGISNISKSYYEAADMDGASEWTKFWKVTLPLVWPQVKISILYIVITTLNGSFVIVQVMT
GGGPNNSTHVMGSYLYQQAFVQFNFGYGATIGVMILVLSLITVLLLQFVLRRDKVEY

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=284, Percent_Identity=27.4647887323944, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787570, Length=268, Percent_Identity=24.6268656716418, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790465, Length=192, Percent_Identity=28.6458333333333, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33616; Mature: 33616

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQSKKQKYTFLAVCLLPTFIMFCIFTLYPLFSGLYYSFFEWSGSSQVKTFIGLDNYIQL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHH
FNDVIVPDTIVHDYFLVVTKVIGIMIMAMFFAVALTQLKIKEAPFYRIVFFFPNIMSVVV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IGILWMFIYNPTMGLVNSGLEMLGLGDWAKPWLGSETWALPSLVLPSIWAGIGLFMLMLM
HHHHHHHHHCCCHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GGISNISKSYYEAADMDGASEWTKFWKVTLPLVWPQVKISILYIVITTLNGSFVIVQVMT
HCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHEEEEEECCCCEEEEEEEE
GGGPNNSTHVMGSYLYQQAFVQFNFGYGATIGVMILVLSLITVLLLQFVLRRDKVEY
CCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVQSKKQKYTFLAVCLLPTFIMFCIFTLYPLFSGLYYSFFEWSGSSQVKTFIGLDNYIQL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHH
FNDVIVPDTIVHDYFLVVTKVIGIMIMAMFFAVALTQLKIKEAPFYRIVFFFPNIMSVVV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IGILWMFIYNPTMGLVNSGLEMLGLGDWAKPWLGSETWALPSLVLPSIWAGIGLFMLMLM
HHHHHHHHHCCCHHHHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GGISNISKSYYEAADMDGASEWTKFWKVTLPLVWPQVKISILYIVITTLNGSFVIVQVMT
HCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHEEEEEECCCCEEEEEEEE
GGGPNNSTHVMGSYLYQQAFVQFNFGYGATIGVMILVLSLITVLLLQFVLRRDKVEY
CCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]