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The map label for this gene is yurM [H]

Identifier: 23100007

GI number: 23100007

Start: 2606576

End: 2607418

Strand: Reverse

Name: yurM [H]

Synonym: OB2552

Alternate gene names: 23100007

Gene position: 2607418-2606576 (Counterclockwise)

Preceding gene: 23100008

Following gene: 23100006

Centisome position: 71.82

GC content: 33.93

Gene sequence:

>843_bases
TTGAAGCGAAGTGTAGGACAAATATTGGGTAGAGCAGGAATACGTATCCCTTTAATTCTTTGGAGTATAGCAGTTCTATA
TCCAATTATTTGGATGTTTATTGGTTCATTAAAGTCTAATGCAGAAATTTACCGAAACCCTTGGGGATTCCCTGAAATCT
TGAATTGGCAAAATTACGTGAATGCGTGGTCAAATTATAATATTGATACGAGTGTATGGAATAGCCTTATCGTTACACTG
GTCGGTACCTTATTGACACTATTAATGGCGATACCTACAGCCTATGCAATTGAACGAATTAATTTTAAGGGAAGTAAACT
CCTATTTACACTCTATGTATCAGCGATGATGATTCCAATGGTATTAGGTTGGATTCCTTTGTTCTTTCTATTATCAAATA
TAGGACTGCTAGACAATGTTTTTGGATTAGCAATTGTTTATAGTGTAAGTCAGCTTCCTTTTACCATATTTGTATTGACG
AGCTTTATGAGTACCATTCCAAAATCATTAGAAGAAGCTGCTTCTATTGATGGAATGTCTCCTTACGGTATGTTATGGAA
AATAATTACACCACTAAGTATGTCCGGAATCATAACGGTAACAATTATGAATGCTATTCAATTCTGGAATGAATATTTTA
TGGCGTTAATTTTCTTGAATTCTAGTGAAAACTACACACTTGCATTAGCGATAGATTTTATAAGTAATGAAGCACAGTAT
ACTAATGCATGGGGAACCTTATTTGCAAGTCTTATAATTGCTATTATTCCCGTAATTGTTTTATATGCAATTTTTCAAAG
AAGGATTGCTAAAGGAATGACGGAAGGTGCAATTAAAGGGTAA

Upstream 100 bases:

>100_bases
TTTAGTATTATCGTTGATTACTGTATTGCTTTTACAGTTTGTCTTACGAAGAGATAAAGTAGAATACTAGCTTAGCTGGG
TGAGTAGAGGAGGTATTATT

Downstream 100 bases:

>100_bases
CTCAATTAATTATTTATAAATAAGGGTTCAGATTAACTTGTATTGATCCATTCCTAAATAAAGTTTCCCTTTATAATAGG
TTTGTTTTTCTCACATTAAA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKRSVGQILGRAGIRIPLILWSIAVLYPIIWMFIGSLKSNAEIYRNPWGFPEILNWQNYVNAWSNYNIDTSVWNSLIVTL
VGTLLTLLMAIPTAYAIERINFKGSKLLFTLYVSAMMIPMVLGWIPLFFLLSNIGLLDNVFGLAIVYSVSQLPFTIFVLT
SFMSTIPKSLEEAASIDGMSPYGMLWKIITPLSMSGIITVTIMNAIQFWNEYFMALIFLNSSENYTLALAIDFISNEAQY
TNAWGTLFASLIIAIIPVIVLYAIFQRRIAKGMTEGAIKG

Sequences:

>Translated_280_residues
MKRSVGQILGRAGIRIPLILWSIAVLYPIIWMFIGSLKSNAEIYRNPWGFPEILNWQNYVNAWSNYNIDTSVWNSLIVTL
VGTLLTLLMAIPTAYAIERINFKGSKLLFTLYVSAMMIPMVLGWIPLFFLLSNIGLLDNVFGLAIVYSVSQLPFTIFVLT
SFMSTIPKSLEEAASIDGMSPYGMLWKIITPLSMSGIITVTIMNAIQFWNEYFMALIFLNSSENYTLALAIDFISNEAQY
TNAWGTLFASLIIAIIPVIVLYAIFQRRIAKGMTEGAIKG
>Mature_280_residues
MKRSVGQILGRAGIRIPLILWSIAVLYPIIWMFIGSLKSNAEIYRNPWGFPEILNWQNYVNAWSNYNIDTSVWNSLIVTL
VGTLLTLLMAIPTAYAIERINFKGSKLLFTLYVSAMMIPMVLGWIPLFFLLSNIGLLDNVFGLAIVYSVSQLPFTIFVLT
SFMSTIPKSLEEAASIDGMSPYGMLWKIITPLSMSGIITVTIMNAIQFWNEYFMALIFLNSSENYTLALAIDFISNEAQY
TNAWGTLFASLIIAIIPVIVLYAIFQRRIAKGMTEGAIKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=277, Percent_Identity=31.4079422382672, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1790464, Length=214, Percent_Identity=27.1028037383178, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789860, Length=267, Percent_Identity=24.3445692883895, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31416; Mature: 31416

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSVGQILGRAGIRIPLILWSIAVLYPIIWMFIGSLKSNAEIYRNPWGFPEILNWQNYV
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCHHHHH
NAWSNYNIDTSVWNSLIVTLVGTLLTLLMAIPTAYAIERINFKGSKLLFTLYVSAMMIPM
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VLGWIPLFFLLSNIGLLDNVFGLAIVYSVSQLPFTIFVLTSFMSTIPKSLEEAASIDGMS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PYGMLWKIITPLSMSGIITVTIMNAIQFWNEYFMALIFLNSSENYTLALAIDFISNEAQY
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEECCCCCHH
TNAWGTLFASLIIAIIPVIVLYAIFQRRIAKGMTEGAIKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKRSVGQILGRAGIRIPLILWSIAVLYPIIWMFIGSLKSNAEIYRNPWGFPEILNWQNYV
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCHHHHH
NAWSNYNIDTSVWNSLIVTLVGTLLTLLMAIPTAYAIERINFKGSKLLFTLYVSAMMIPM
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
VLGWIPLFFLLSNIGLLDNVFGLAIVYSVSQLPFTIFVLTSFMSTIPKSLEEAASIDGMS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PYGMLWKIITPLSMSGIITVTIMNAIQFWNEYFMALIFLNSSENYTLALAIDFISNEAQY
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEECCCCCHH
TNAWGTLFASLIIAIIPVIVLYAIFQRRIAKGMTEGAIKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]