Click here to switch to the map view.

The map label for this gene is comFC [H]

Identifier: 23099971

GI number: 23099971

Start: 2572490

End: 2573167

Strand: Reverse

Name: comFC [H]

Synonym: OB2516

Alternate gene names: 23099971

Gene position: 2573167-2572490 (Counterclockwise)

Preceding gene: 23099972

Following gene: 23099970

Centisome position: 70.88

GC content: 34.81

Gene sequence:

>678_bases
ATGAATCAATGTCTGAGTTGCGGTCAATCTATGGATACAACAGTTTCCTGGGGGAATTGGTTAACCTTTAAACGAGATCA
AGTCATTTGTTCTAACTGTTCACTCTATATGGAAAAAATAACCGGAAGTAGGTGTTCGATTTGTAGTCGTCCAAGTGAAT
TAACAATATGTCACGATTGTACAGAATGGAATCAACTTGGAGAGGTTATTCAATTTAATTATTCCGTATTTCTTTATAAT
GAATGGATGAAAAATATTATCTCATTGTGGAAGTTTCGAGGTGATTATGTGTTACGTGAAATATTTCGCGATGAATTGAA
GTATGCGTTTGATCGTGTTTTTATAGATCAGAAAAAAGAATTAATTCTAGTACCTGTGCCTCTGAGCGATAAACGAATGA
AGGAAAGAGGATTTAATCAAGCTCTCGCACTGGCTGAAATGTTAGATATGCCAATTCAACAAGCGATTGGAAGAAAGGTT
AGTGATAAACAATCAAAAAAATCAAGAGTGGAAAGATTGAAGTCTACTAATCCATTTTATAGTTCTAGTCCGATTCGAAA
AAACGTTGTTCTAATTGATGATATTTATACAACAGGAACTACCATACGCCAGGCAGCTTCGATATTATTAGAGAATGGCT
GTCCGGAAGTTTATGCTTTTACACTTCTAAGAGGATAA

Upstream 100 bases:

>100_bases
ATCCAACTGGAGAAGTTGTATTCTTTCATAGCGGTAAAACAAAGGCAATGGAAAAAAGTAAGCAATTGATAGTTGATATG
AACCGAAAAGGGAAAAAATT

Downstream 100 bases:

>100_bases
TAATTAGACATAATTCTGACATAAAACTGTTGTATACTTTTATTGTATATCAATTGGTTACAGGAAGTGGAAATATGAAA
AAAATATTGATTATAGAGGA

Product: late competence protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MNQCLSCGQSMDTTVSWGNWLTFKRDQVICSNCSLYMEKITGSRCSICSRPSELTICHDCTEWNQLGEVIQFNYSVFLYN
EWMKNIISLWKFRGDYVLREIFRDELKYAFDRVFIDQKKELILVPVPLSDKRMKERGFNQALALAEMLDMPIQQAIGRKV
SDKQSKKSRVERLKSTNPFYSSSPIRKNVVLIDDIYTTGTTIRQAASILLENGCPEVYAFTLLRG

Sequences:

>Translated_225_residues
MNQCLSCGQSMDTTVSWGNWLTFKRDQVICSNCSLYMEKITGSRCSICSRPSELTICHDCTEWNQLGEVIQFNYSVFLYN
EWMKNIISLWKFRGDYVLREIFRDELKYAFDRVFIDQKKELILVPVPLSDKRMKERGFNQALALAEMLDMPIQQAIGRKV
SDKQSKKSRVERLKSTNPFYSSSPIRKNVVLIDDIYTTGTTIRQAASILLENGCPEVYAFTLLRG
>Mature_225_residues
MNQCLSCGQSMDTTVSWGNWLTFKRDQVICSNCSLYMEKITGSRCSICSRPSELTICHDCTEWNQLGEVIQFNYSVFLYN
EWMKNIISLWKFRGDYVLREIFRDELKYAFDRVFIDQKKELILVPVPLSDKRMKERGFNQALALAEMLDMPIQQAIGRKV
SDKQSKKSRVERLKSTNPFYSSSPIRKNVVLIDDIYTTGTTIRQAASILLENGCPEVYAFTLLRG

Specific function: Involved in transformation (competence for DNA uptake) [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 26062; Mature: 26062

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQCLSCGQSMDTTVSWGNWLTFKRDQVICSNCSLYMEKITGSRCSICSRPSELTICHDC
CCHHHHCCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCHHCCCCCCEEEEECC
TEWNQLGEVIQFNYSVFLYNEWMKNIISLWKFRGDYVLREIFRDELKYAFDRVFIDQKKE
HHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCC
LILVPVPLSDKRMKERGFNQALALAEMLDMPIQQAIGRKVSDKQSKKSRVERLKSTNPFY
EEEEECCCCHHHHHHCCHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
SSSPIRKNVVLIDDIYTTGTTIRQAASILLENGCPEVYAFTLLRG
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHEECC
>Mature Secondary Structure
MNQCLSCGQSMDTTVSWGNWLTFKRDQVICSNCSLYMEKITGSRCSICSRPSELTICHDC
CCHHHHCCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCHHCCCCCCEEEEECC
TEWNQLGEVIQFNYSVFLYNEWMKNIISLWKFRGDYVLREIFRDELKYAFDRVFIDQKKE
HHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCC
LILVPVPLSDKRMKERGFNQALALAEMLDMPIQQAIGRKVSDKQSKKSRVERLKSTNPFY
EEEEECCCCHHHHHHCCHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
SSSPIRKNVVLIDDIYTTGTTIRQAASILLENGCPEVYAFTLLRG
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 8045879; 9384377 [H]