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The map label for this gene is swrAB [H]

Identifier: 23099944

GI number: 23099944

Start: 2546744

End: 2547934

Strand: Reverse

Name: swrAB [H]

Synonym: OB2489

Alternate gene names: 23099944

Gene position: 2547934-2546744 (Counterclockwise)

Preceding gene: 23099945

Following gene: 23099943

Centisome position: 70.18

GC content: 34.51

Gene sequence:

>1191_bases
ATGGTAGAGACTTGGTTATTAGAAGGAGCAAAATCAGTCGGCAGGTTTTTTGTGAACCCGACTTTATATTGGTTTATTTT
TATTTTGACAGTAGCTAGCTATTTTCGTATAAAAAGAGAGAGACAAGACTTTGGAATAAAAGTTTACCAGAAATTTATCG
AGTGGAAAGGAACGTCAGCTGTTTCTTTAATCACAGGGTTGGTCTTATCAGTTATTATAGTTGGTACTGGCATGGTATTT
TCTTATGAAGTATTAATTTTATTAGCAATAGTAACAATTATACTTAGTATTAGCACAAAATTTTCACTGTTGTCACCGAG
TTATATTATTGGAATGACTTTTTTGCTGTTATTAGTTATACCTCCTTTGTTAGAAATGCAAACTCAGCTAAATTATAGTT
TTGACTATGGTCTAAGCTTTAAATCATTAGCAATAATAGGTGCTTTGTTACTTTTTAGTGAATCCATTTTAATTCAACGA
ATTCAAAAACAATCAACATTCCCGCGAATATCACTTAGTGACAGAGGTATATGGGTAGGTCAACACCAAGTGAAAAGATT
AGCTTTAATTCCGTTACTTGTATTAGTTCCAGAAGGGCTTATTACTTCTTTTGCCCCTTGGTGGCCTTATTTATCTGTTG
GTGAAACATCGCTCGGCTTAGCTCTTGTTCCTTTTATAATCGGATTTGATTATACCGCAAAAGGGCATTATCATTTGGAT
GCTATAAAAAAAGTCTCAAAAGCGAATTATATGTTAGCGAGTGTAATTTTAATGATCGCTGTAGCAGGCGTATTTGTTCC
TTATTTATCACTGACTTCAATAATTTTAGCTATTATTGGTAAAGAATATTTAAATTATCGTTATAGAGAGGGAGATAGAC
TTCGTCGTCCTTATTATCAGCCACATGATCAAGGACTACGAGTAGTCGGCGTGTTACCTAATAGTCCAGCTCATAGACTT
GAAATTTCTCCTGGTGAATCTATCTATCGAGTCAACGGTCGAAAAGTAACAAATAGTCAAAGCTTTTATGAGGCACTACA
AGGTAACGGTGCATTTATTAAATTAGAAATACTTGATTATCAACAGGAGATTAGGCTCGTTCAAGGATCACTATATGAAG
GAGAGCACCATGCATTAGGGTTACTTTTCCCTAAGGAACCGTTTAAACAGAAACAAAAGCAAACAGGCTAA

Upstream 100 bases:

>100_bases
GATTTACTTATTTCTTTTACAAAAAAGCAGGAAAAACGATAGAAGGATCGAATATTTTTATATAGACAATTTGATTAGGC
ATAGTAAAGTAGGTGACGAT

Downstream 100 bases:

>100_bases
TGAAGAAGAAAGAGAATAGGATTAGTATGAACGAACAATAATGGAGGGTATATGTAAATATATCCAACGTATTGTTCGTT
TTACCTTTTATAACAGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MVETWLLEGAKSVGRFFVNPTLYWFIFILTVASYFRIKRERQDFGIKVYQKFIEWKGTSAVSLITGLVLSVIIVGTGMVF
SYEVLILLAIVTIILSISTKFSLLSPSYIIGMTFLLLLVIPPLLEMQTQLNYSFDYGLSFKSLAIIGALLLFSESILIQR
IQKQSTFPRISLSDRGIWVGQHQVKRLALIPLLVLVPEGLITSFAPWWPYLSVGETSLGLALVPFIIGFDYTAKGHYHLD
AIKKVSKANYMLASVILMIAVAGVFVPYLSLTSIILAIIGKEYLNYRYREGDRLRRPYYQPHDQGLRVVGVLPNSPAHRL
EISPGESIYRVNGRKVTNSQSFYEALQGNGAFIKLEILDYQQEIRLVQGSLYEGEHHALGLLFPKEPFKQKQKQTG

Sequences:

>Translated_396_residues
MVETWLLEGAKSVGRFFVNPTLYWFIFILTVASYFRIKRERQDFGIKVYQKFIEWKGTSAVSLITGLVLSVIIVGTGMVF
SYEVLILLAIVTIILSISTKFSLLSPSYIIGMTFLLLLVIPPLLEMQTQLNYSFDYGLSFKSLAIIGALLLFSESILIQR
IQKQSTFPRISLSDRGIWVGQHQVKRLALIPLLVLVPEGLITSFAPWWPYLSVGETSLGLALVPFIIGFDYTAKGHYHLD
AIKKVSKANYMLASVILMIAVAGVFVPYLSLTSIILAIIGKEYLNYRYREGDRLRRPYYQPHDQGLRVVGVLPNSPAHRL
EISPGESIYRVNGRKVTNSQSFYEALQGNGAFIKLEILDYQQEIRLVQGSLYEGEHHALGLLFPKEPFKQKQKQTG
>Mature_396_residues
MVETWLLEGAKSVGRFFVNPTLYWFIFILTVASYFRIKRERQDFGIKVYQKFIEWKGTSAVSLITGLVLSVIIVGTGMVF
SYEVLILLAIVTIILSISTKFSLLSPSYIIGMTFLLLLVIPPLLEMQTQLNYSFDYGLSFKSLAIIGALLLFSESILIQR
IQKQSTFPRISLSDRGIWVGQHQVKRLALIPLLVLVPEGLITSFAPWWPYLSVGETSLGLALVPFIIGFDYTAKGHYHLD
AIKKVSKANYMLASVILMIAVAGVFVPYLSLTSIILAIIGKEYLNYRYREGDRLRRPYYQPHDQGLRVVGVLPNSPAHRL
EISPGESIYRVNGRKVTNSQSFYEALQGNGAFIKLEILDYQQEIRLVQGSLYEGEHHALGLLFPKEPFKQKQKQTG

Specific function: Required for surface-adhering cells to differentiate into hyperflagellated and elongated swarm cells [H]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44754; Mature: 44754

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVETWLLEGAKSVGRFFVNPTLYWFIFILTVASYFRIKRERQDFGIKVYQKFIEWKGTSA
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHH
VSLITGLVLSVIIVGTGMVFSYEVLILLAIVTIILSISTKFSLLSPSYIIGMTFLLLLVI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHH
PPLLEMQTQLNYSFDYGLSFKSLAIIGALLLFSESILIQRIQKQSTFPRISLSDRGIWVG
HHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEC
QHQVKRLALIPLLVLVPEGLITSFAPWWPYLSVGETSLGLALVPFIIGFDYTAKGHYHLD
HHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHH
AIKKVSKANYMLASVILMIAVAGVFVPYLSLTSIILAIIGKEYLNYRYREGDRLRRPYYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCC
PHDQGLRVVGVLPNSPAHRLEISPGESIYRVNGRKVTNSQSFYEALQGNGAFIKLEILDY
CCCCCCEEEEECCCCCCCEEEECCCCCEEEECCEEECCHHHHHHHHCCCCCEEEEEEECH
QQEIRLVQGSLYEGEHHALGLLFPKEPFKQKQKQTG
HHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHCCCC
>Mature Secondary Structure
MVETWLLEGAKSVGRFFVNPTLYWFIFILTVASYFRIKRERQDFGIKVYQKFIEWKGTSA
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHH
VSLITGLVLSVIIVGTGMVFSYEVLILLAIVTIILSISTKFSLLSPSYIIGMTFLLLLVI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHH
PPLLEMQTQLNYSFDYGLSFKSLAIIGALLLFSESILIQRIQKQSTFPRISLSDRGIWVG
HHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEC
QHQVKRLALIPLLVLVPEGLITSFAPWWPYLSVGETSLGLALVPFIIGFDYTAKGHYHLD
HHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHH
AIKKVSKANYMLASVILMIAVAGVFVPYLSLTSIILAIIGKEYLNYRYREGDRLRRPYYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCC
PHDQGLRVVGVLPNSPAHRLEISPGESIYRVNGRKVTNSQSFYEALQGNGAFIKLEILDY
CCCCCCEEEEECCCCCCCEEEECCCCCEEEECCEEECCHHHHHHHHCCCCCEEEEEEECH
QQEIRLVQGSLYEGEHHALGLLFPKEPFKQKQKQTG
HHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]