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The map label for this gene is crtN [H]

Identifier: 23099916

GI number: 23099916

Start: 2518029

End: 2519564

Strand: Reverse

Name: crtN [H]

Synonym: OB2461

Alternate gene names: 23099916

Gene position: 2519564-2518029 (Counterclockwise)

Preceding gene: 23099917

Following gene: 23099915

Centisome position: 69.4

GC content: 33.79

Gene sequence:

>1536_bases
ATGAAAAATAAGAAAGTAATAGTAATCGGAGCTGGTGTGGCTGGGTTAGCGAGCGCTATACGATTACAACATGCTGGATT
CAACGTGGAAGTTTATGAGAAAGAATCGATGCCAGGCGGTAAAATGCATCAAATCACGAAGGATGGATTTACATTTGATC
TGGGCCCAAGTATCGTGATGATGCCTGAATTATATCGGGAAGTATTTGAATTGACTGGAAGAAATCCTGATGATTATATC
CCGATGGAGCGAATAGATCCAATGTATAATGTTTTCTTTGGTAATACACCTGAAGATCGATATCAGATTTCATCTGATTT
AATCCAACTAATTGATGAAATTGAAGCAATTAGTGACAAAGATGCTGCTGGTTTTATTACCTATTTAAATAAAATATATC
AACGTTTTCAAATTGCGAAGGATCATTTTATACAACGACCATTTAGACATCCTTGGCAATTTTTTACACCCAAAACATTG
TGGAATGGATTAAAACTAAGAACGCTGGGAAATGCAGATAATTTCATAAAAAAATATATTAAAGATGAACGATTACGACA
AATGATTAGCTTTCAAACTTTATATATTGGTATCTCCCCTTATAATGGACCTTCCCTTTATACAATAATTCCCATGATAG
AAATGCTTTACGGTGTATGGTTTATAAAAGGTGGAATGTACACGATGGCAACATCTATGGAGAAGTTGTTTCTAGAGTTA
GGTGGTACTATACATTATAATTCACCGGTTGAAAAAGTGATAATAGAAAAAAAGAAAGCAACAGGTATCAAATTAGAAAA
CCTTGAAATCAATGCAGATTATGTCGTTTGTAACGCGGACTTCCCATATTCAATGAAAAATTTAATACAAGATATAAAAG
CAAAAGGAAAATATACAGATGAAAAAATTGATAAAATGAAGTATTCATGTTCCTGCTTCATTATGTATCTAGGTATGAAT
AAAAAATACGATGAAGTTAGTAATGTTCATAATTTCTTTTTCAGTGAAAATTTAAAAGAAACGATGGATGATATTTTTAC
AGGAAAACGATTAGAGGACCCCGCCTTTTATACATATATAGGTTCGAAAATGGATCCTTCACTTGCTCCTGAGGGAAAGG
ATGGAATATATGTATTAGTTCCGGTTTCTGATTTGTCAACGGCACAGTATAGTTGGGGAGATGAAACAATAGCTTATTAT
CGAGAAAAGGTGTTTGAAAAATTAGATGAAATTGATGAATTTAAAGGTATTAAAGACGAAGTCATCTCCGAAACCTACAT
GACACCACTAGACTTTGAATCAAAATTTAATGCTTATAATGGAGCGTGTTTTGGATTACGTCCGACGTTAAGTCAGAGTA
ATCATTTACGTCCTCAAAGCAAGGCGAAAAACTGTGAAAATTTATATTTCACAGGAAGTAGTACACATCCAGGAGCAGGA
GTCCCTATCGTATTATTATCTGCAAAGATTGCTACTGAAGAATTGTTAAAAGATGATAGAGAGCTTGTTTATGGAGAGGA
TGGAGTACATGCATAA

Upstream 100 bases:

>100_bases
TTAATAAATTTTGATATAGATATATTTATAAACTGTTACTAATTTTATAAAAGGGGTAATAAGAGAATTAAGTGACTTAT
TTTATTACTGGAGGATGTCT

Downstream 100 bases:

>100_bases
TCAACTAATTAAAGATTATAATTTTTGTGAGAAAGTCATAAAAAAACATTCAAAAAGCTTTTATTTCGCCTTTAATAAAT
TACCAAAAGAGAAAGCTCGA

Product: phytoene dehydrogenase

Products: NA

Alternate protein names: 4,4'-diapophytoene desaturase; Diapophytoene desaturase [H]

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MKNKKVIVIGAGVAGLASAIRLQHAGFNVEVYEKESMPGGKMHQITKDGFTFDLGPSIVMMPELYREVFELTGRNPDDYI
PMERIDPMYNVFFGNTPEDRYQISSDLIQLIDEIEAISDKDAAGFITYLNKIYQRFQIAKDHFIQRPFRHPWQFFTPKTL
WNGLKLRTLGNADNFIKKYIKDERLRQMISFQTLYIGISPYNGPSLYTIIPMIEMLYGVWFIKGGMYTMATSMEKLFLEL
GGTIHYNSPVEKVIIEKKKATGIKLENLEINADYVVCNADFPYSMKNLIQDIKAKGKYTDEKIDKMKYSCSCFIMYLGMN
KKYDEVSNVHNFFFSENLKETMDDIFTGKRLEDPAFYTYIGSKMDPSLAPEGKDGIYVLVPVSDLSTAQYSWGDETIAYY
REKVFEKLDEIDEFKGIKDEVISETYMTPLDFESKFNAYNGACFGLRPTLSQSNHLRPQSKAKNCENLYFTGSSTHPGAG
VPIVLLSAKIATEELLKDDRELVYGEDGVHA

Sequences:

>Translated_511_residues
MKNKKVIVIGAGVAGLASAIRLQHAGFNVEVYEKESMPGGKMHQITKDGFTFDLGPSIVMMPELYREVFELTGRNPDDYI
PMERIDPMYNVFFGNTPEDRYQISSDLIQLIDEIEAISDKDAAGFITYLNKIYQRFQIAKDHFIQRPFRHPWQFFTPKTL
WNGLKLRTLGNADNFIKKYIKDERLRQMISFQTLYIGISPYNGPSLYTIIPMIEMLYGVWFIKGGMYTMATSMEKLFLEL
GGTIHYNSPVEKVIIEKKKATGIKLENLEINADYVVCNADFPYSMKNLIQDIKAKGKYTDEKIDKMKYSCSCFIMYLGMN
KKYDEVSNVHNFFFSENLKETMDDIFTGKRLEDPAFYTYIGSKMDPSLAPEGKDGIYVLVPVSDLSTAQYSWGDETIAYY
REKVFEKLDEIDEFKGIKDEVISETYMTPLDFESKFNAYNGACFGLRPTLSQSNHLRPQSKAKNCENLYFTGSSTHPGAG
VPIVLLSAKIATEELLKDDRELVYGEDGVHA
>Mature_511_residues
MKNKKVIVIGAGVAGLASAIRLQHAGFNVEVYEKESMPGGKMHQITKDGFTFDLGPSIVMMPELYREVFELTGRNPDDYI
PMERIDPMYNVFFGNTPEDRYQISSDLIQLIDEIEAISDKDAAGFITYLNKIYQRFQIAKDHFIQRPFRHPWQFFTPKTL
WNGLKLRTLGNADNFIKKYIKDERLRQMISFQTLYIGISPYNGPSLYTIIPMIEMLYGVWFIKGGMYTMATSMEKLFLEL
GGTIHYNSPVEKVIIEKKKATGIKLENLEINADYVVCNADFPYSMKNLIQDIKAKGKYTDEKIDKMKYSCSCFIMYLGMN
KKYDEVSNVHNFFFSENLKETMDDIFTGKRLEDPAFYTYIGSKMDPSLAPEGKDGIYVLVPVSDLSTAQYSWGDETIAYY
REKVFEKLDEIDEFKGIKDEVISETYMTPLDFESKFNAYNGACFGLRPTLSQSNHLRPQSKAKNCENLYFTGSSTHPGAG
VPIVLLSAKIATEELLKDDRELVYGEDGVHA

Specific function: Catalyzes three successive dehydrogenation reactions that lead to the introduction of three double bonds into dehydrosqualene (4,4'-diapophytoene), with 4,4'-diapophytofluene and 4,4'-diapo-zeta-carotene as intermediates, and 4,4'- diaponeurosporene (the

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family. CrtN subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 58464; Mature: 58464

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKKVIVIGAGVAGLASAIRLQHAGFNVEVYEKESMPGGKMHQITKDGFTFDLGPSIVM
CCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCCEEEECCCCEEE
MPELYREVFELTGRNPDDYIPMERIDPMYNVFFGNTPEDRYQISSDLIQLIDEIEAISDK
CHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
DAAGFITYLNKIYQRFQIAKDHFIQRPFRHPWQFFTPKTLWNGLKLRTLGNADNFIKKYI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCEEEEEECCHHHHHHHHH
KDERLRQMISFQTLYIGISPYNGPSLYTIIPMIEMLYGVWFIKGGMYTMATSMEKLFLEL
HHHHHHHHHCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GGTIHYNSPVEKVIIEKKKATGIKLENLEINADYVVCNADFPYSMKNLIQDIKAKGKYTD
CCEEEECCCHHHHHHHHHHCCCEEEEEEEEECCEEEECCCCCHHHHHHHHHHHHCCCCCH
EKIDKMKYSCSCFIMYLGMNKKYDEVSNVHNFFFSENLKETMDDIFTGKRLEDPAFYTYI
HHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
GSKMDPSLAPEGKDGIYVLVPVSDLSTAQYSWGDETIAYYREKVFEKLDEIDEFKGIKDE
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
VISETYMTPLDFESKFNAYNGACFGLRPTLSQSNHLRPQSKAKNCENLYFTGSSTHPGAG
HHHHHCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCHHCCCCCEEEEECCCCCCCCC
VPIVLLSAKIATEELLKDDRELVYGEDGVHA
CEEEEEEHHHHHHHHHCCCHHEEECCCCCCC
>Mature Secondary Structure
MKNKKVIVIGAGVAGLASAIRLQHAGFNVEVYEKESMPGGKMHQITKDGFTFDLGPSIVM
CCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEECCCEEEECCCCEEE
MPELYREVFELTGRNPDDYIPMERIDPMYNVFFGNTPEDRYQISSDLIQLIDEIEAISDK
CHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
DAAGFITYLNKIYQRFQIAKDHFIQRPFRHPWQFFTPKTLWNGLKLRTLGNADNFIKKYI
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCEEEEEECCHHHHHHHHH
KDERLRQMISFQTLYIGISPYNGPSLYTIIPMIEMLYGVWFIKGGMYTMATSMEKLFLEL
HHHHHHHHHCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GGTIHYNSPVEKVIIEKKKATGIKLENLEINADYVVCNADFPYSMKNLIQDIKAKGKYTD
CCEEEECCCHHHHHHHHHHCCCEEEEEEEEECCEEEECCCCCHHHHHHHHHHHHCCCCCH
EKIDKMKYSCSCFIMYLGMNKKYDEVSNVHNFFFSENLKETMDDIFTGKRLEDPAFYTYI
HHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
GSKMDPSLAPEGKDGIYVLVPVSDLSTAQYSWGDETIAYYREKVFEKLDEIDEFKGIKDE
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
VISETYMTPLDFESKFNAYNGACFGLRPTLSQSNHLRPQSKAKNCENLYFTGSSTHPGAG
HHHHHCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCHHCCCCCEEEEECCCCCCCCC
VPIVLLSAKIATEELLKDDRELVYGEDGVHA
CEEEEEEHHHHHHHHHCCCHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA