Click here to switch to the map view.

The map label for this gene is crtB [H]

Identifier: 23099915

GI number: 23099915

Start: 2517182

End: 2518036

Strand: Reverse

Name: crtB [H]

Synonym: OB2460

Alternate gene names: 23099915

Gene position: 2518036-2517182 (Counterclockwise)

Preceding gene: 23099916

Following gene: 23099914

Centisome position: 69.36

GC content: 31.46

Gene sequence:

>855_bases
ATGCATAATCAACTAATTAAAGATTATAATTTTTGTGAGAAAGTCATAAAAAAACATTCAAAAAGCTTTTATTTCGCCTT
TAATAAATTACCAAAAGAGAAAGCTCGAGCAGTGTTTGCAATTTATACATTTTGTAGATATGCGGATGATTCCGTGGATA
ATTTTAATAATAGTGAAGAAAAACAATCAAAAATAGATAAAATAAGAAAAGAACTAGATTATTTTTCTAAAGGGGAAATA
GTAGATAGTCCTCTATGGAGGGCACTAGCAGATGTTTTTGAAAGATACGACATGGATCTTTATCCTTTTTGGGAACAGTT
GGAAGGGCAACAAATGGATATTAATTTTCAACAGCCACACACATTACAAGAACTTGAAAACTATTGTAGTTATGTAGCTG
GTTCAGTTGGCAGAATGTTAATACCAATTATAGCCTCTCAGTCTATCCGTGATTTAAAAAAAGAAGCAAACGATTTAGGA
ATAGCAATGCAATTGACCAATATATTGAGAGATGTAGGTGAAGATTTTAAAGAGAATAATAGAATATATTTGCCATTACA
GGAAATGTCACTAGTTTGTTACACCCATGTAGACATTTCGGATGGGAAGCGAAATAAAGAATTTATTATGTTATGGGAAA
AGCTAGCGAATAGGGCAGAGACTCTTTATGAAAACTTCTTAAACCAATTAGATTACTTCGATAAAGATAGTCAAGTTCCT
ATTAGGTTATCAGCACAAGTATATCGTGGAATATTAGATGCAATTAGAGGTAATGATTATAACTGCTTTGAATATCGAAA
TTATGTACCACTACCAACAATGAAACAATGGTTGAATCAAGCTACTAGTATCTAG

Upstream 100 bases:

>100_bases
CCAGGAGCAGGAGTCCCTATCGTATTATTATCTGCAAAGATTGCTACTGAAGAATTGTTAAAAGATGATAGAGAGCTTGT
TTATGGAGAGGATGGAGTAC

Downstream 100 bases:

>100_bases
ATTAGGAGTGAATAACGTGAAAAAGGTAATTATTATTGGTGGTGGACTCGGAGGGCTGTCGGCAGCGATTTCAATGGCGC
AGTTAGGATACAGTGTAGAA

Product: phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MHNQLIKDYNFCEKVIKKHSKSFYFAFNKLPKEKARAVFAIYTFCRYADDSVDNFNNSEEKQSKIDKIRKELDYFSKGEI
VDSPLWRALADVFERYDMDLYPFWEQLEGQQMDINFQQPHTLQELENYCSYVAGSVGRMLIPIIASQSIRDLKKEANDLG
IAMQLTNILRDVGEDFKENNRIYLPLQEMSLVCYTHVDISDGKRNKEFIMLWEKLANRAETLYENFLNQLDYFDKDSQVP
IRLSAQVYRGILDAIRGNDYNCFEYRNYVPLPTMKQWLNQATSI

Sequences:

>Translated_284_residues
MHNQLIKDYNFCEKVIKKHSKSFYFAFNKLPKEKARAVFAIYTFCRYADDSVDNFNNSEEKQSKIDKIRKELDYFSKGEI
VDSPLWRALADVFERYDMDLYPFWEQLEGQQMDINFQQPHTLQELENYCSYVAGSVGRMLIPIIASQSIRDLKKEANDLG
IAMQLTNILRDVGEDFKENNRIYLPLQEMSLVCYTHVDISDGKRNKEFIMLWEKLANRAETLYENFLNQLDYFDKDSQVP
IRLSAQVYRGILDAIRGNDYNCFEYRNYVPLPTMKQWLNQATSI
>Mature_284_residues
MHNQLIKDYNFCEKVIKKHSKSFYFAFNKLPKEKARAVFAIYTFCRYADDSVDNFNNSEEKQSKIDKIRKELDYFSKGEI
VDSPLWRALADVFERYDMDLYPFWEQLEGQQMDINFQQPHTLQELENYCSYVAGSVGRMLIPIIASQSIRDLKKEANDLG
IAMQLTNILRDVGEDFKENNRIYLPLQEMSLVCYTHVDISDGKRNKEFIMLWEKLANRAETLYENFLNQLDYFDKDSQVP
IRLSAQVYRGILDAIRGNDYNCFEYRNYVPLPTMKQWLNQATSI

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 33607; Mature: 33607

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNQLIKDYNFCEKVIKKHSKSFYFAFNKLPKEKARAVFAIYTFCRYADDSVDNFNNSEE
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHCCCCCHH
KQSKIDKIRKELDYFSKGEIVDSPLWRALADVFERYDMDLYPFWEQLEGQQMDINFQQPH
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCCCCCC
TLQELENYCSYVAGSVGRMLIPIIASQSIRDLKKEANDLGIAMQLTNILRDVGEDFKENN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RIYLPLQEMSLVCYTHVDISDGKRNKEFIMLWEKLANRAETLYENFLNQLDYFDKDSQVP
EEEEEHHHHCEEHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
IRLSAQVYRGILDAIRGNDYNCFEYRNYVPLPTMKQWLNQATSI
EEEHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MHNQLIKDYNFCEKVIKKHSKSFYFAFNKLPKEKARAVFAIYTFCRYADDSVDNFNNSEE
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHCCCCCHH
KQSKIDKIRKELDYFSKGEIVDSPLWRALADVFERYDMDLYPFWEQLEGQQMDINFQQPH
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCCCCCC
TLQELENYCSYVAGSVGRMLIPIIASQSIRDLKKEANDLGIAMQLTNILRDVGEDFKENN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RIYLPLQEMSLVCYTHVDISDGKRNKEFIMLWEKLANRAETLYENFLNQLDYFDKDSQVP
EEEEEHHHHCEEHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
IRLSAQVYRGILDAIRGNDYNCFEYRNYVPLPTMKQWLNQATSI
EEEHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA