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The map label for this gene is ypeP [H]

Identifier: 23099704

GI number: 23099704

Start: 2289171

End: 2289833

Strand: Reverse

Name: ypeP [H]

Synonym: OB2249

Alternate gene names: 23099704

Gene position: 2289833-2289171 (Counterclockwise)

Preceding gene: 23099705

Following gene: 23099703

Centisome position: 63.07

GC content: 33.03

Gene sequence:

>663_bases
GTGAATATACGTTTAGCATATATGTATCGAGCTAAAGGAATCGAGATAAATTTTATGTCGGATGAAATGCGTATAGAAGA
TGGCGTTATAGTTGCGGAGAAGTTAGAGAAAGAGAAGTCTGTTCAAAATCTATATGCAATAGATGATCTGGATCGAACCT
GGTCGACTAAAGAATTAAAACGCTTAGTAGCTCAAGTGGAAGAAGAACCCCATCATATTTTGGTTTACTTTGATGGTGGA
TTTGATAGAAATGATTTAATTGCAGGTGTTGGAGTTGTAATTTACTACGAAAAAAACAAAAAATACTTTCGACGTAGAAA
AAACGTCAAATTAGAGCAGTTAGATAATAATAATGAAGCAGAATATGCTGGATTATATCATAGTTTAGAGCTACTTGAAG
AAATGCAAGCGACTCATCAGTCAATTACCTTTAAAGGCGATTCAATGGTAGTTATTCATCAGTTGAAAGAAGAGTGGCCT
TGCTATGAAGAAAATCTTCAACGTTGGATTGATCGTATTGAAAATAAGATAGAACAACTTGGAATCCAACCTGATTATCA
AGTTATTCCGAGAAAAGATAATAAGGAAGCTGACCAATTAGCATCACAATCAATTCAAGGTATACAAATTGAAAGTACAT
TGGAAATAAATAAAAGAAAATAA

Upstream 100 bases:

>100_bases
TCATACTAAATTAATTGTGAAATAAAGATCGGATATCCGATCTTTTTTCATATTTTGGGAAATGACTAAGAATGAAAAAA
AGATGATCGGTGGAGATAAA

Downstream 100 bases:

>100_bases
GAAATAGCTAACTTAGTTGATTTTTTGAGATTGATTATATTATCATTTAAGTATTGGATTTCGAGCATTTTATTAGAAAT
ATATGAATAAGACAAGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MNIRLAYMYRAKGIEINFMSDEMRIEDGVIVAEKLEKEKSVQNLYAIDDLDRTWSTKELKRLVAQVEEEPHHILVYFDGG
FDRNDLIAGVGVVIYYEKNKKYFRRRKNVKLEQLDNNNEAEYAGLYHSLELLEEMQATHQSITFKGDSMVVIHQLKEEWP
CYEENLQRWIDRIENKIEQLGIQPDYQVIPRKDNKEADQLASQSIQGIQIESTLEINKRK

Sequences:

>Translated_220_residues
MNIRLAYMYRAKGIEINFMSDEMRIEDGVIVAEKLEKEKSVQNLYAIDDLDRTWSTKELKRLVAQVEEEPHHILVYFDGG
FDRNDLIAGVGVVIYYEKNKKYFRRRKNVKLEQLDNNNEAEYAGLYHSLELLEEMQATHQSITFKGDSMVVIHQLKEEWP
CYEENLQRWIDRIENKIEQLGIQPDYQVIPRKDNKEADQLASQSIQGIQIESTLEINKRK
>Mature_220_residues
MNIRLAYMYRAKGIEINFMSDEMRIEDGVIVAEKLEKEKSVQNLYAIDDLDRTWSTKELKRLVAQVEEEPHHILVYFDGG
FDRNDLIAGVGVVIYYEKNKKYFRRRKNVKLEQLDNNNEAEYAGLYHSLELLEEMQATHQSITFKGDSMVVIHQLKEEWP
CYEENLQRWIDRIENKIEQLGIQPDYQVIPRKDNKEADQLASQSIQGIQIESTLEINKRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RNase H domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002156 [H]

Pfam domain/function: PF00075 RnaseH [H]

EC number: NA

Molecular weight: Translated: 25999; Mature: 25999

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50879 RNASE_H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRLAYMYRAKGIEINFMSDEMRIEDGVIVAEKLEKEKSVQNLYAIDDLDRTWSTKELK
CCEEEEEEEEECCEEEEEECCCEEECCCEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RLVAQVEEEPHHILVYFDGGFDRNDLIAGVGVVIYYEKNKKYFRRRKNVKLEQLDNNNEA
HHHHHHCCCCCEEEEEECCCCCCCHHEEECEEEEEEECCHHHHHHHCCCEEEECCCCCCH
EYAGLYHSLELLEEMQATHQSITFKGDSMVVIHQLKEEWPCYEENLQRWIDRIENKIEQL
HHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHC
GIQPDYQVIPRKDNKEADQLASQSIQGIQIESTLEINKRK
CCCCCCEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MNIRLAYMYRAKGIEINFMSDEMRIEDGVIVAEKLEKEKSVQNLYAIDDLDRTWSTKELK
CCEEEEEEEEECCEEEEEECCCEEECCCEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RLVAQVEEEPHHILVYFDGGFDRNDLIAGVGVVIYYEKNKKYFRRRKNVKLEQLDNNNEA
HHHHHHCCCCCEEEEEECCCCCCCHHEEECEEEEEEECCHHHHHHHCCCEEEECCCCCCH
EYAGLYHSLELLEEMQATHQSITFKGDSMVVIHQLKEEWPCYEENLQRWIDRIENKIEQL
HHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHC
GIQPDYQVIPRKDNKEADQLASQSIQGIQIESTLEINKRK
CCCCCCEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]