Click here to switch to the map view.

The map label for this gene is 23099463

Identifier: 23099463

GI number: 23099463

Start: 2030853

End: 2031122

Strand: Reverse

Name: 23099463

Synonym: OB2008

Alternate gene names: NA

Gene position: 2031122-2030853 (Counterclockwise)

Preceding gene: 23099464

Following gene: 23099462

Centisome position: 55.95

GC content: 35.93

Gene sequence:

>270_bases
ATGAGTTCAATTGATAAAACGATGAAATTCAATTTTTCAGAAGAACCATTTGATCAGGATATTAAGGAAATCTTGATGAC
AGTGCATGAATCACTGCAAGAGAAAGGATACAACCCGATCAATCAGATTGTAGGGTATTTATTATCTGGTGACCCTGCGT
ATATCCCGCGGTATAACGATGCCAGAAATTTAATTCGTAAGGTAGAACGTGATGAAGTGATTGAAGAACTTGTTAAGTTT
TATCTAGAACAGAACAGGGAGACTAAATGA

Upstream 100 bases:

>100_bases
AATAATCTTGAAGGTTGTATGTTCATAAGGAAAAAAGTATAATAATAACCACAAACATGTTAAAATATTTGTAGAAGGCT
AATTGGGATGAGGTGTCACG

Downstream 100 bases:

>100_bases
AAATAATTGGTTTAGATGTCGGCTCAAAAACGATTGGCGTTGCGGTTAGTGATGCATTAGGTTGGACTGCTCAAGGAGTC
AAAACCATTCGATGGGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MSSIDKTMKFNFSEEPFDQDIKEILMTVHESLQEKGYNPINQIVGYLLSGDPAYIPRYNDARNLIRKVERDEVIEELVKF
YLEQNRETK

Sequences:

>Translated_89_residues
MSSIDKTMKFNFSEEPFDQDIKEILMTVHESLQEKGYNPINQIVGYLLSGDPAYIPRYNDARNLIRKVERDEVIEELVKF
YLEQNRETK
>Mature_88_residues
SSIDKTMKFNFSEEPFDQDIKEILMTVHESLQEKGYNPINQIVGYLLSGDPAYIPRYNDARNLIRKVERDEVIEELVKFY
LEQNRETK

Specific function: Unknown

COG id: COG4472

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0297 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2008_OCEIH (Q8EPT0)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_692929.1
- GeneID:   1018491
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB2008
- NMPDR:   fig|221109.1.peg.2007
- HOGENOM:   HBG304642
- OMA:   KTMKFNF
- ProtClustDB:   PRK05473
- BioCyc:   OIHE221109:OB2008-MONOMER
- HAMAP:   MF_01507
- InterPro:   IPR009309
- PIRSF:   PIRSF037258

Pfam domain/function: PF06135 DUF965

EC number: NA

Molecular weight: Translated: 10573; Mature: 10442

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIDKTMKFNFSEEPFDQDIKEILMTVHESLQEKGYNPINQIVGYLLSGDPAYIPRYND
CCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCH
ARNLIRKVERDEVIEELVKFYLEQNRETK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSIDKTMKFNFSEEPFDQDIKEILMTVHESLQEKGYNPINQIVGYLLSGDPAYIPRYND
CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCH
ARNLIRKVERDEVIEELVKFYLEQNRETK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376