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The map label for this gene is ymcA [H]

Identifier: 23099084

GI number: 23099084

Start: 1669263

End: 1669691

Strand: Direct

Name: ymcA [H]

Synonym: OB1629

Alternate gene names: 23099084

Gene position: 1669263-1669691 (Clockwise)

Preceding gene: 23099083

Following gene: 23099085

Centisome position: 45.98

GC content: 33.8

Gene sequence:

>429_bases
ATGACAGAATATACTCGTAAAGAAGTGTTGGATGAAGCAAAGAAGTTAGCTAATATGTTAGCAAGCACAGAAGAAATTGA
TCGTTTTAAACAAGTAGAAGCAAAGCTTAACGAAAATAAAAAAGTTCAATCACTCATCCAAAAGATTAAAACATTGCAAA
AACAAGCAGTTAATTTTCAAGCATATGAGAAAAGAGAAGCTTTAAAACGTGTAGAAGAGGAAATCGATCGTTTACAAGCT
GAAATCGATGATATACCAGTTGTTCAAGAATTTAAGGAAACACAAATTGTCGTTAATGATGTATTGCAGTTAGTGTCAAA
AACAATCGCTCGTGAAGTAACGAATGAAGTGATTGAATCTACTGGCGGAGATATTTTAGCAGGAGAGACAGGTTCTAAAG
CAAAAAACAAGTCAGGGTGTTCGCATTAA

Upstream 100 bases:

>100_bases
AAATCATCAATTGGTAAAATTGTAGAAGTAGAAATAACAGAAACCAAAACATGGTCTTTAAACGGCGTGATGGTTGAAAA
TACAGTTGAGGTGAACTAGT

Downstream 100 bases:

>100_bases
ACAGCGTATTCTCTAGAAACCGCACTGTTTTGATAAAGAAATAAAATGATAATCTCTCTTTGGCTAGAAGAGCTTGGGAT
AGAACAAAATTAAATTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTEYTRKEVLDEAKKLANMLASTEEIDRFKQVEAKLNENKKVQSLIQKIKTLQKQAVNFQAYEKREALKRVEEEIDRLQA
EIDDIPVVQEFKETQIVVNDVLQLVSKTIAREVTNEVIESTGGDILAGETGSKAKNKSGCSH

Sequences:

>Translated_142_residues
MTEYTRKEVLDEAKKLANMLASTEEIDRFKQVEAKLNENKKVQSLIQKIKTLQKQAVNFQAYEKREALKRVEEEIDRLQA
EIDDIPVVQEFKETQIVVNDVLQLVSKTIAREVTNEVIESTGGDILAGETGSKAKNKSGCSH
>Mature_141_residues
TEYTRKEVLDEAKKLANMLASTEEIDRFKQVEAKLNENKKVQSLIQKIKTLQKQAVNFQAYEKREALKRVEEEIDRLQAE
IDDIPVVQEFKETQIVVNDVLQLVSKTIAREVTNEVIESTGGDILAGETGSKAKNKSGCSH

Specific function: May work together with ylbF to regulate community development [H]

COG id: COG4550

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016783
- InterPro:   IPR010368 [H]

Pfam domain/function: PF06133 DUF964 [H]

EC number: NA

Molecular weight: Translated: 16092; Mature: 15961

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEYTRKEVLDEAKKLANMLASTEEIDRFKQVEAKLNENKKVQSLIQKIKTLQKQAVNFQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AYEKREALKRVEEEIDRLQAEIDDIPVVQEFKETQIVVNDVLQLVSKTIAREVTNEVIES
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGGDILAGETGSKAKNKSGCSH
CCCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEYTRKEVLDEAKKLANMLASTEEIDRFKQVEAKLNENKKVQSLIQKIKTLQKQAVNFQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AYEKREALKRVEEEIDRLQAEIDDIPVVQEFKETQIVVNDVLQLVSKTIAREVTNEVIES
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGGDILAGETGSKAKNKSGCSH
CCCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]