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The map label for this gene is ymfH [H]

Identifier: 23099072

GI number: 23099072

Start: 1656869

End: 1658152

Strand: Direct

Name: ymfH [H]

Synonym: OB1617

Alternate gene names: 23099072

Gene position: 1656869-1658152 (Clockwise)

Preceding gene: 23099071

Following gene: 23099073

Centisome position: 45.64

GC content: 33.33

Gene sequence:

>1284_bases
GTGAATAAAGAAGTATTTCAAGAATTAGGTGAGACGCTTTATACGAAACAATTACCTAATGGATTAAATGTATATTTATT
ACCGAAATCAGAGATGTCGAAAACATATGGTATTTTCTCTACCAAGTATGGTTCTATTGATCAAACGTTTATCCCCCTCG
GTGAAAATGAAAAAATATCTGTCCCTGAAGGAATTGCTCACTTTTTAGAGCACAAGCTATTCGAAAAAGAAGACAGAGAT
GTTTTTGCTGATTTTAGTAAACAAGGTGCTTCACCAAATGCTTTTACTTCATTTACACAAACAGCATACTTATTTTCTGC
GACTAGTCAAATTGAAAAAAATGTCCTTACTCTCATTGACTTTGTTCAGGATCCGTATTTTTCTGAAGAATCCGTGGAGA
AGGAAAAAGGGATTATCGCTCAAGAAATAAAAATGTACGATGATCAACCGGATTGGCAATCCTTCATGGGGACAATCAAA
GCAATGTTTCACGATCATCCAGTGAATATAGATATTGCTGGTACGGTAGAGTCTATTTCCTCTATTACCAAGGATGATTT
GTATACTTGTTATCAAACATTTTACCATCCAGAAAATATGAGTTTAGTCGTTGCAGGTAATTTTAACCCACAGTCAATGA
TGGATTTAATAACGGATAATCAATCTAAGAAGGATTTCAAAAAAATGGATGAAATTCAACGATTTCTTCCAAATGAATTG
GATCATGTAGCAGAAAAAAATAAAAAAATTACAATGCCGGTGTCGATTCCAAAATGTACCGTTGGGATTAAAGAACCGAC
AAATAATGTAAAAGGAAACGAAATTCTCCGAAGGGATTTAATGGTTGGAATGTTTTTAAGCCACTTTTTCTCTACTGGAG
GACCATTCTACCAGGAATTATATGGGGATGGATTAATTGATGACTCCTTTTATTTCGAGTCAAATTTGGATGCGACTTTC
GGTTATTCTCTGATAGGTACTAATACAGATCAACCAGAACAATTTAGTCAACGAGTTAAAGATTTATTACTTTCAACAAA
GGATATAAAAATGGATGAAGAAACATTTAAAAGAATGAAGAAAAAGAAAATAGGTCAGTTATTACGTTCGATGAACTCGC
TGGAGTTTACTGCAAATAAATTTATTTCTTATCTCCATTTGGGAGTGAATTTATTTGAAGTCGTTCCATTTATACAACAA
TTAACGGTGGATGATGCAAATAAATTTTTAAGTGAGTGGATTAAGGAAGAACGATTAGCAACTTGTACTATTTCTGCAGA
ATAA

Upstream 100 bases:

>100_bases
AAAGATATTAAATCTGTTACAAAACAACAAGTGATAGAAGTTGCTAAAGAAATTGAGGAAGATACAATATTTTTACTAAC
AAGTAAGGGTGGTGAGAAGA

Downstream 100 bases:

>100_bases
GGTGAGAATATGAGGGGAAATGTACTAGTTATTGGTGCAAGTGGAGAAATCGGTATTGCTATTGCTCGTAAACTTGCTAA
AGAAGGATATTCGTTATTAT

Product: processing proteinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MNKEVFQELGETLYTKQLPNGLNVYLLPKSEMSKTYGIFSTKYGSIDQTFIPLGENEKISVPEGIAHFLEHKLFEKEDRD
VFADFSKQGASPNAFTSFTQTAYLFSATSQIEKNVLTLIDFVQDPYFSEESVEKEKGIIAQEIKMYDDQPDWQSFMGTIK
AMFHDHPVNIDIAGTVESISSITKDDLYTCYQTFYHPENMSLVVAGNFNPQSMMDLITDNQSKKDFKKMDEIQRFLPNEL
DHVAEKNKKITMPVSIPKCTVGIKEPTNNVKGNEILRRDLMVGMFLSHFFSTGGPFYQELYGDGLIDDSFYFESNLDATF
GYSLIGTNTDQPEQFSQRVKDLLLSTKDIKMDEETFKRMKKKKIGQLLRSMNSLEFTANKFISYLHLGVNLFEVVPFIQQ
LTVDDANKFLSEWIKEERLATCTISAE

Sequences:

>Translated_427_residues
MNKEVFQELGETLYTKQLPNGLNVYLLPKSEMSKTYGIFSTKYGSIDQTFIPLGENEKISVPEGIAHFLEHKLFEKEDRD
VFADFSKQGASPNAFTSFTQTAYLFSATSQIEKNVLTLIDFVQDPYFSEESVEKEKGIIAQEIKMYDDQPDWQSFMGTIK
AMFHDHPVNIDIAGTVESISSITKDDLYTCYQTFYHPENMSLVVAGNFNPQSMMDLITDNQSKKDFKKMDEIQRFLPNEL
DHVAEKNKKITMPVSIPKCTVGIKEPTNNVKGNEILRRDLMVGMFLSHFFSTGGPFYQELYGDGLIDDSFYFESNLDATF
GYSLIGTNTDQPEQFSQRVKDLLLSTKDIKMDEETFKRMKKKKIGQLLRSMNSLEFTANKFISYLHLGVNLFEVVPFIQQ
LTVDDANKFLSEWIKEERLATCTISAE
>Mature_427_residues
MNKEVFQELGETLYTKQLPNGLNVYLLPKSEMSKTYGIFSTKYGSIDQTFIPLGENEKISVPEGIAHFLEHKLFEKEDRD
VFADFSKQGASPNAFTSFTQTAYLFSATSQIEKNVLTLIDFVQDPYFSEESVEKEKGIIAQEIKMYDDQPDWQSFMGTIK
AMFHDHPVNIDIAGTVESISSITKDDLYTCYQTFYHPENMSLVVAGNFNPQSMMDLITDNQSKKDFKKMDEIQRFLPNEL
DHVAEKNKKITMPVSIPKCTVGIKEPTNNVKGNEILRRDLMVGMFLSHFFSTGGPFYQELYGDGLIDDSFYFESNLDATF
GYSLIGTNTDQPEQFSQRVKDLLLSTKDIKMDEETFKRMKKKKIGQLLRSMNSLEFTANKFISYLHLGVNLFEVVPFIQQ
LTVDDANKFLSEWIKEERLATCTISAE

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Homo sapiens, GI94538354, Length=167, Percent_Identity=29.940119760479, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1787770, Length=247, Percent_Identity=25.1012145748988, Blast_Score=73, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71999683, Length=224, Percent_Identity=29.0178571428571, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6323192, Length=207, Percent_Identity=28.5024154589372, Blast_Score=63, Evalue=9e-11,
Organism=Drosophila melanogaster, GI21357875, Length=205, Percent_Identity=27.8048780487805, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24646943, Length=205, Percent_Identity=27.8048780487805, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 48914; Mature: 48914

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKEVFQELGETLYTKQLPNGLNVYLLPKSEMSKTYGIFSTKYGSIDQTFIPLGENEKIS
CCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCC
VPEGIAHFLEHKLFEKEDRDVFADFSKQGASPNAFTSFTQTAYLFSATSQIEKNVLTLID
CHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVQDPYFSEESVEKEKGIIAQEIKMYDDQPDWQSFMGTIKAMFHDHPVNIDIAGTVESIS
HHHCCCCCHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHH
SITKDDLYTCYQTFYHPENMSLVVAGNFNPQSMMDLITDNQSKKDFKKMDEIQRFLPNEL
HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH
DHVAEKNKKITMPVSIPKCTVGIKEPTNNVKGNEILRRDLMVGMFLSHFFSTGGPFYQEL
HHHHHCCCEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
YGDGLIDDSFYFESNLDATFGYSLIGTNTDQPEQFSQRVKDLLLSTKDIKMDEETFKRMK
HCCCCCCCCEEECCCCCCHHCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
KKKIGQLLRSMNSLEFTANKFISYLHLGVNLFEVVPFIQQLTVDDANKFLSEWIKEERLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
TCTISAE
EEEEECC
>Mature Secondary Structure
MNKEVFQELGETLYTKQLPNGLNVYLLPKSEMSKTYGIFSTKYGSIDQTFIPLGENEKIS
CCHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCC
VPEGIAHFLEHKLFEKEDRDVFADFSKQGASPNAFTSFTQTAYLFSATSQIEKNVLTLID
CHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVQDPYFSEESVEKEKGIIAQEIKMYDDQPDWQSFMGTIKAMFHDHPVNIDIAGTVESIS
HHHCCCCCHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHH
SITKDDLYTCYQTFYHPENMSLVVAGNFNPQSMMDLITDNQSKKDFKKMDEIQRFLPNEL
HHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH
DHVAEKNKKITMPVSIPKCTVGIKEPTNNVKGNEILRRDLMVGMFLSHFFSTGGPFYQEL
HHHHHCCCEEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
YGDGLIDDSFYFESNLDATFGYSLIGTNTDQPEQFSQRVKDLLLSTKDIKMDEETFKRMK
HCCCCCCCCEEECCCCCCHHCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
KKKIGQLLRSMNSLEFTANKFISYLHLGVNLFEVVPFIQQLTVDDANKFLSEWIKEERLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
TCTISAE
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]