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The map label for this gene is lytR [H]

Identifier: 23098725

GI number: 23098725

Start: 1313844

End: 1314686

Strand: Direct

Name: lytR [H]

Synonym: OB1270

Alternate gene names: 23098725

Gene position: 1313844-1314686 (Clockwise)

Preceding gene: 23098724

Following gene: 23098726

Centisome position: 36.19

GC content: 32.15

Gene sequence:

>843_bases
ATGGATAGGGATAAAAAGAATTCTTCACTAGAAGATTATAACTTGTTTTTTACAAAGAAAGATAGAGAAGAAACATTAAA
GAAAATTAAGGATGGAACACAGTATAAAAGTGAAGTGAAATCAAAGAAAAGTTTCTTAGGCCCGGCTATTGGTACCTTCG
TAGTTTTAATACTTTCTATCGGTCTTATATATGTTTATAGTCAATCCTCCGTTAATCAAAGTCAATATGATAATCAAGCT
CAAGACACAGTCGCTCAAAATGATAATGCATTCTCGTTTGTACTTTTTGGGTCGGACGAAGCAGCCAATAATAATCGGAG
CTCGATTATTATTTTGGTCACATATAATAGTTCTGATAATAGTATGAAAATGGTCCCGATATCAAGAGATACTTATGCGA
CGATAATTAATTCGGACGGAGAAGATATGGGGAAGAATAAAATAACGCACGCTACTGCGTATAGTTCTACTTATGATTCC
GCATTAAAAACAGTAGAGAATTTAATGGATGTCCCTATTGAATACTATAGCGCAGTCTCTGAAGAAGTGTTTTTTGATGA
ACTTGATTTAACCAAAGAAGAAGTGAGAGAAGATAGATTAATGAGTAACCTTGAGGAAGTTCTTCGTGAAAGAATGAAGA
TTAATGATTTAATTCGTGTTCTTAAAAATAGTGATACAAATATGCCGGAGAAAGTAATAAGTGACATGAACATCGAATCA
TTGGAAATATTGGATCTGTACAGTTCAGATGTTGTAATAGATGAGATTTACTACCAAAAGATTGATAGTGATAACTTAGA
TATAATATCAAATGATTTAAAAGAGCATCTCACTAAAAATTAA

Upstream 100 bases:

>100_bases
GAGATTACTGATGTCACAGGTTTGAACGAAAATACAGTGAAAACCAGATTGAGAAGGGCAAAACAACGCTTAAAAACTAT
GATGAAGGAGGCTGACATAT

Downstream 100 bases:

>100_bases
TATTCAGAACTTATTGACATTTAGGGTGGCTGTGGTAAGCTAATTGAAATACATTATAGGCAATGAAGAGGAGTAGTAAG
GATTTCTTATTTATAAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MDRDKKNSSLEDYNLFFTKKDREETLKKIKDGTQYKSEVKSKKSFLGPAIGTFVVLILSIGLIYVYSQSSVNQSQYDNQA
QDTVAQNDNAFSFVLFGSDEAANNNRSSIIILVTYNSSDNSMKMVPISRDTYATIINSDGEDMGKNKITHATAYSSTYDS
ALKTVENLMDVPIEYYSAVSEEVFFDELDLTKEEVREDRLMSNLEEVLRERMKINDLIRVLKNSDTNMPEKVISDMNIES
LEILDLYSSDVVIDEIYYQKIDSDNLDIISNDLKEHLTKN

Sequences:

>Translated_280_residues
MDRDKKNSSLEDYNLFFTKKDREETLKKIKDGTQYKSEVKSKKSFLGPAIGTFVVLILSIGLIYVYSQSSVNQSQYDNQA
QDTVAQNDNAFSFVLFGSDEAANNNRSSIIILVTYNSSDNSMKMVPISRDTYATIINSDGEDMGKNKITHATAYSSTYDS
ALKTVENLMDVPIEYYSAVSEEVFFDELDLTKEEVREDRLMSNLEEVLRERMKINDLIRVLKNSDTNMPEKVISDMNIES
LEILDLYSSDVVIDEIYYQKIDSDNLDIISNDLKEHLTKN
>Mature_280_residues
MDRDKKNSSLEDYNLFFTKKDREETLKKIKDGTQYKSEVKSKKSFLGPAIGTFVVLILSIGLIYVYSQSSVNQSQYDNQA
QDTVAQNDNAFSFVLFGSDEAANNNRSSIIILVTYNSSDNSMKMVPISRDTYATIINSDGEDMGKNKITHATAYSSTYDS
ALKTVENLMDVPIEYYSAVSEEVFFDELDLTKEEVREDRLMSNLEEVLRERMKINDLIRVLKNSDTNMPEKVISDMNIES
LEILDLYSSDVVIDEIYYQKIDSDNLDIISNDLKEHLTKN

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 31981; Mature: 31981

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRDKKNSSLEDYNLFFTKKDREETLKKIKDGTQYKSEVKSKKSFLGPAIGTFVVLILSI
CCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
GLIYVYSQSSVNQSQYDNQAQDTVAQNDNAFSFVLFGSDEAANNNRSSIIILVTYNSSDN
HHHEEECCCCCCHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCC
SMKMVPISRDTYATIINSDGEDMGKNKITHATAYSSTYDSALKTVENLMDVPIEYYSAVS
CEEEEEECCCCEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
EEVFFDELDLTKEEVREDRLMSNLEEVLRERMKINDLIRVLKNSDTNMPEKVISDMNIES
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCH
LEILDLYSSDVVIDEIYYQKIDSDNLDIISNDLKEHLTKN
HHHEEHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MDRDKKNSSLEDYNLFFTKKDREETLKKIKDGTQYKSEVKSKKSFLGPAIGTFVVLILSI
CCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH
GLIYVYSQSSVNQSQYDNQAQDTVAQNDNAFSFVLFGSDEAANNNRSSIIILVTYNSSDN
HHHEEECCCCCCHHHCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCC
SMKMVPISRDTYATIINSDGEDMGKNKITHATAYSSTYDSALKTVENLMDVPIEYYSAVS
CEEEEEECCCCEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
EEVFFDELDLTKEEVREDRLMSNLEEVLRERMKINDLIRVLKNSDTNMPEKVISDMNIES
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCH
LEILDLYSSDVVIDEIYYQKIDSDNLDIISNDLKEHLTKN
HHHEEHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA