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The map label for this gene is yahJ [H]

Identifier: 23098722

GI number: 23098722

Start: 1311331

End: 1312542

Strand: Direct

Name: yahJ [H]

Synonym: OB1267

Alternate gene names: 23098722

Gene position: 1311331-1312542 (Clockwise)

Preceding gene: 23098721

Following gene: 23098723

Centisome position: 36.12

GC content: 35.15

Gene sequence:

>1212_bases
ATGAGTGAATCAAAGTGGTTGCGTAATGTAAGACTAGAAAAAGCTTATTTGGCGAGAGAAGGATTTACATATGGTAGTAA
AACAAAAACGGTAGATATAGAGATTAAAAATGGGAAAATAAGTGATATTATGGATCATCAAAAATCTAATTTAGATGGGA
ACAATGAGATAGATGGAAATAATTATCTTATTTTACCAACTTTACGAGAAATGCATTGTCATCTGGATAAAAGTAAGCTT
GGTGTTCCTTGGGAACCGATTACTCCAGCAAATAATATTGTAGAGAGGTTTACAAGTGAAATAAAGGAATTGGATAATCT
ATCCCTTTCATTAAAAGATAGAGCGAAAAACTTAATAGAAACGGAGATTTCTAATGGTGTTACATTTTTCCGTTCACATA
TTGATGTTCATCCAGCAGTAGGACAACGTTACCTTGAAGGGGTATTAGAAACTTTAGAAGACTATCAAGGAAAGTTAGAT
TACGAACTTGTCGCGTTTCCACAGCACGGTTTGCTCCGTTCAAATGCATATGATGACGTGAAAAAAGCTTTGGAATCAGG
TGTGCAATTGATTGGTGGTGTTGACCCTTCTTCATTGGATGGTGACCTTGAAAGATCTTTAAGTCAAACATTCGAGCTTG
CAGTTCAATTCAATGTGCCTATAGATATTCATGTCCATGATCGGAATGAGCATGGAACAGAAACAGTTAAAAAATTAATT
GAGTATACTAAGCAAAGTAATTGGCAAGGGAAAGTGGCAATCAGTCATGCTTTTGGATTGAATGATTTTGTGGGCGAAGA
AAGAGAAATGGTATTTAGTGAATTAGCAGAACAAGGTATATCTGTTATATCTAGTGTTCCGATTAATGGAAGGATTCCTC
CATTGGAAGAATTAAGAGCAGCGGGTGTTAACGTAAATTTAGGCTGTGATAATGTTTACGATTCATGGTCGCCTTTCGGA
ACTGGAGATATCTTAGGAAAATTAAATCGTTATGCTGAAATACATCGTTTAACGACTCAAGAAGCATTAACTAATTCCTT
AGCTCTTATTACTGGAAAACCACTAAATATAGAAAAAGAGAAAACATGGATTGAAAAAGATATGGATGCGAGTTTCATAT
TAGTAGATAGTTCATCAACTGCAGAATTTGTGGCAAGACAAAATCCGGTCAAATTTAGTTTCTATAAAGGGACTGTTGTG
CATAGTCTGTAG

Upstream 100 bases:

>100_bases
GTATTGTTAGAAACATTCAATGATAGAGATGAGAAAGTTTTAAATGTTGAATTGTCAGCTATAATGAAGCTTTAAATTTA
TAATTTTGAGGAGTGTTCGG

Downstream 100 bases:

>100_bases
ATGATTAAAGGGAGACAAAGGAACAGCTGCCTAAGATATAACAGGGGAGAAGATTGTATTTGAAAATTAGAGAATACGAA
GATAGAGATGAAGTTGGTTG

Product: putative deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MSESKWLRNVRLEKAYLAREGFTYGSKTKTVDIEIKNGKISDIMDHQKSNLDGNNEIDGNNYLILPTLREMHCHLDKSKL
GVPWEPITPANNIVERFTSEIKELDNLSLSLKDRAKNLIETEISNGVTFFRSHIDVHPAVGQRYLEGVLETLEDYQGKLD
YELVAFPQHGLLRSNAYDDVKKALESGVQLIGGVDPSSLDGDLERSLSQTFELAVQFNVPIDIHVHDRNEHGTETVKKLI
EYTKQSNWQGKVAISHAFGLNDFVGEEREMVFSELAEQGISVISSVPINGRIPPLEELRAAGVNVNLGCDNVYDSWSPFG
TGDILGKLNRYAEIHRLTTQEALTNSLALITGKPLNIEKEKTWIEKDMDASFILVDSSSTAEFVARQNPVKFSFYKGTVV
HSL

Sequences:

>Translated_403_residues
MSESKWLRNVRLEKAYLAREGFTYGSKTKTVDIEIKNGKISDIMDHQKSNLDGNNEIDGNNYLILPTLREMHCHLDKSKL
GVPWEPITPANNIVERFTSEIKELDNLSLSLKDRAKNLIETEISNGVTFFRSHIDVHPAVGQRYLEGVLETLEDYQGKLD
YELVAFPQHGLLRSNAYDDVKKALESGVQLIGGVDPSSLDGDLERSLSQTFELAVQFNVPIDIHVHDRNEHGTETVKKLI
EYTKQSNWQGKVAISHAFGLNDFVGEEREMVFSELAEQGISVISSVPINGRIPPLEELRAAGVNVNLGCDNVYDSWSPFG
TGDILGKLNRYAEIHRLTTQEALTNSLALITGKPLNIEKEKTWIEKDMDASFILVDSSSTAEFVARQNPVKFSFYKGTVV
HSL
>Mature_402_residues
SESKWLRNVRLEKAYLAREGFTYGSKTKTVDIEIKNGKISDIMDHQKSNLDGNNEIDGNNYLILPTLREMHCHLDKSKLG
VPWEPITPANNIVERFTSEIKELDNLSLSLKDRAKNLIETEISNGVTFFRSHIDVHPAVGQRYLEGVLETLEDYQGKLDY
ELVAFPQHGLLRSNAYDDVKKALESGVQLIGGVDPSSLDGDLERSLSQTFELAVQFNVPIDIHVHDRNEHGTETVKKLIE
YTKQSNWQGKVAISHAFGLNDFVGEEREMVFSELAEQGISVISSVPINGRIPPLEELRAAGVNVNLGCDNVYDSWSPFGT
GDILGKLNRYAEIHRLTTQEALTNSLALITGKPLNIEKEKTWIEKDMDASFILVDSSSTAEFVARQNPVKFSFYKGTVVH
SL

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786517, Length=400, Percent_Identity=36.25, Blast_Score=261, Evalue=6e-71,
Organism=Escherichia coli, GI1786531, Length=390, Percent_Identity=26.6666666666667, Blast_Score=125, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45205; Mature: 45074

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESKWLRNVRLEKAYLAREGFTYGSKTKTVDIEIKNGKISDIMDHQKSNLDGNNEIDGN
CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCC
NYLILPTLREMHCHLDKSKLGVPWEPITPANNIVERFTSEIKELDNLSLSLKDRAKNLIE
CEEEECCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHH
TEISNGVTFFRSHIDVHPAVGQRYLEGVLETLEDYQGKLDYELVAFPQHGLLRSNAYDDV
HHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHCCCHHHH
KKALESGVQLIGGVDPSSLDGDLERSLSQTFELAVQFNVPIDIHVHDRNEHGTETVKKLI
HHHHHHCHHEECCCCCCCCCHHHHHHHHHHEEEEEEECCEEEEEEECCCCCCHHHHHHHH
EYTKQSNWQGKVAISHAFGLNDFVGEEREMVFSELAEQGISVISSVPINGRIPPLEELRA
HHHHCCCCCCEEEEEEECCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
AGVNVNLGCDNVYDSWSPFGTGDILGKLNRYAEIHRLTTQEALTNSLALITGKPLNIEKE
CCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHH
KTWIEKDMDASFILVDSSSTAEFVARQNPVKFSFYKGTVVHSL
HHHHHHCCCCEEEEEECCCHHHHHHCCCCEEEEEECCEEECCC
>Mature Secondary Structure 
SESKWLRNVRLEKAYLAREGFTYGSKTKTVDIEIKNGKISDIMDHQKSNLDGNNEIDGN
CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCC
NYLILPTLREMHCHLDKSKLGVPWEPITPANNIVERFTSEIKELDNLSLSLKDRAKNLIE
CEEEECCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHH
TEISNGVTFFRSHIDVHPAVGQRYLEGVLETLEDYQGKLDYELVAFPQHGLLRSNAYDDV
HHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHCCCHHHH
KKALESGVQLIGGVDPSSLDGDLERSLSQTFELAVQFNVPIDIHVHDRNEHGTETVKKLI
HHHHHHCHHEECCCCCCCCCHHHHHHHHHHEEEEEEECCEEEEEEECCCCCCHHHHHHHH
EYTKQSNWQGKVAISHAFGLNDFVGEEREMVFSELAEQGISVISSVPINGRIPPLEELRA
HHHHCCCCCCEEEEEEECCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
AGVNVNLGCDNVYDSWSPFGTGDILGKLNRYAEIHRLTTQEALTNSLALITGKPLNIEKE
CCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHH
KTWIEKDMDASFILVDSSSTAEFVARQNPVKFSFYKGTVVHSL
HHHHHHCCCCEEEEEECCCHHHHHHCCCCEEEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]