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The map label for this gene is ydiF [H]

Identifier: 23097846

GI number: 23097846

Start: 415581

End: 417467

Strand: Direct

Name: ydiF [H]

Synonym: OB0391

Alternate gene names: 23097846

Gene position: 415581-417467 (Clockwise)

Preceding gene: 23097845

Following gene: 23097847

Centisome position: 11.45

GC content: 34.61

Gene sequence:

>1887_bases
ATGATTGCGTGTAGTATACAAAATATTAAAAAGATGTACGGTGGAAATCTTATTTTTGAAAGAATTAGTCTGGAAATAAA
TGAAAATGAAAGAATAGGTATCGTTGGCAGAAATGGATCTGGAAAGTCGACGCTGCTCAGGTTGATGGCAAAGATAGAAG
ACCCCGATGAAGGTAAGATTCATTGGAGAAAGAATACCGAAGTGGGTTATTTAGAACAAATACAAGCCGAGATGAATGGA
TTAACAGTTTATCACGTATTGAAAAGTGCTTTTGAAACTTTAAACGATTTAGAAATACAAATGCAGGAATACGAGGAAAA
GATGCAGGACACTTTAGAAAATGTATCCGATCTTGTTATCCAATATGGAGAGATTCAAGAACGTTTCTCTTTTTTAGGTG
GCTATGAAAGAGATGCGCAAATCGAAAAAGTTTGCCGTGGGATAAATATAATTTCATTATTAGAGCTGACATTTCAACAA
CTAAGTGGAGGAGAAAAGACAAAGGTTGCTCTGGCAACAATCTTATTGAAACAACCCGATTTTCTATTGTTAGATGAACC
AACCAATCATCTTGATATATCTGCGGTTGAATGGTTAGCTTCATTTCTAAATGATTATCCAGGAACAGTGGTTATCGTGT
CTCATGATCGTTACTTCCTCGATGAAACAGTAACGAAAATTATTGATTTAGAAGATGGGGAAGCAGTTATGTATGAAACC
AATTTTAGTAATCACATAAAGGAAAAGGAATCCAGGTTATTAAAAGAGTTCCAAGATTATCAAGAACAGCAAAAGAAAAT
TAAGAAAATGAGAGAGGCAATCAAACGACTACGTGAATGGGCGAATCGCGCTAATCCACCGAATGAAGGATTGCATAAAC
GTGCAAGAAATATGGAACGTGCTATAGAACGAATGGAAAAGATCGATAAACCACTACTTCATCGAAATAAGATGGGGTTA
GATATAGAAACAGCAGATAGAAGTGGAAAAGACGTTGTTAGATTAGAAGACGTAAAGAAGCGTTTTGAAGAACATCTACT
CTTTGAAAATGTTAATATGCACATTCGATATCAGGAGAGAGTAGCCATTATAGGAGAGAATGGAACAGGGAAATCTACGT
TGATTAAGATATTATTACAATCTCAACAACCTGATGTTGGAACAGTTTATATCGGTAATAATGTGAAGATTGGTTATCTT
TCACAGCATGTTTTCCAAGATATAAATCCAACTAAAACGGTGATAGAGGTTTTTCGAGAGCAGATCGCAGTTGAAGAAGG
AAGAGCAAGATATATATTAGCACAATTCTTATTCTATGGATATGCGGTGTTTCGGAAAGTTTCAGAACTTAGTGGTGGAG
AAAAGATGCGACTTCGATTAGCCCAACTAATGTATGAGGACATAAATACGCTCGTATTAGATGAACCGACCAACCATCTT
GATATTGATTCACGAGAAGTATTAGAAGAAGCTTTAGAAAACTTTCAAGGAACGATAATTGCAGTAAGTCATGATCGATA
CTTTTTAGATAAGATATTTAGGCGTATATATTGGATAGAAGATAAAACGGTTTATGATTATGATGGAAATTATTCTTGGG
CTAGAGAAAAAATGAATGATAACAGGATAAAAAGAAAAGAAATCTTGGATATTCGTAATAATTCTAAGCAGTATGCAACT
ATCTCTCAACCTATTATTCCTGTGCCATCAAAAAATAAAGAGCAGGAAAACCTATTGGAACAAATTGAAAAGTTAGAGCA
AGAATTGGTAACTATCGAAGGAAAGATGGAGAAAACAATGGATGTTGATCAATTAATGGTGCTTCAAAAGAATAAAGAAG
AGATAGAACAGTTATGGGAGCACTATTTTCTTTTAATAGAAGAGTAA

Upstream 100 bases:

>100_bases
TTATAAAATATGAATTTTTGCACAAAGAGACCCCTGCTGCTCTTTGTGCTTTTTTCTTCTTATTGTCATTAGAGGTGACA
AGTAAAGGAGATATATATAC

Downstream 100 bases:

>100_bases
ATTTATAGTTAAAAAGGCAGGTAATGTAGGCTGTTCCTGTCTTTTTATGCTAGGATATAAGTAGGGGTTAAAAGTAGTCT
ATTATGGCAAGAATAGTTGT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 628; Mature: 628

Protein sequence:

>628_residues
MIACSIQNIKKMYGGNLIFERISLEINENERIGIVGRNGSGKSTLLRLMAKIEDPDEGKIHWRKNTEVGYLEQIQAEMNG
LTVYHVLKSAFETLNDLEIQMQEYEEKMQDTLENVSDLVIQYGEIQERFSFLGGYERDAQIEKVCRGINIISLLELTFQQ
LSGGEKTKVALATILLKQPDFLLLDEPTNHLDISAVEWLASFLNDYPGTVVIVSHDRYFLDETVTKIIDLEDGEAVMYET
NFSNHIKEKESRLLKEFQDYQEQQKKIKKMREAIKRLREWANRANPPNEGLHKRARNMERAIERMEKIDKPLLHRNKMGL
DIETADRSGKDVVRLEDVKKRFEEHLLFENVNMHIRYQERVAIIGENGTGKSTLIKILLQSQQPDVGTVYIGNNVKIGYL
SQHVFQDINPTKTVIEVFREQIAVEEGRARYILAQFLFYGYAVFRKVSELSGGEKMRLRLAQLMYEDINTLVLDEPTNHL
DIDSREVLEEALENFQGTIIAVSHDRYFLDKIFRRIYWIEDKTVYDYDGNYSWAREKMNDNRIKRKEILDIRNNSKQYAT
ISQPIIPVPSKNKEQENLLEQIEKLEQELVTIEGKMEKTMDVDQLMVLQKNKEEIEQLWEHYFLLIEE

Sequences:

>Translated_628_residues
MIACSIQNIKKMYGGNLIFERISLEINENERIGIVGRNGSGKSTLLRLMAKIEDPDEGKIHWRKNTEVGYLEQIQAEMNG
LTVYHVLKSAFETLNDLEIQMQEYEEKMQDTLENVSDLVIQYGEIQERFSFLGGYERDAQIEKVCRGINIISLLELTFQQ
LSGGEKTKVALATILLKQPDFLLLDEPTNHLDISAVEWLASFLNDYPGTVVIVSHDRYFLDETVTKIIDLEDGEAVMYET
NFSNHIKEKESRLLKEFQDYQEQQKKIKKMREAIKRLREWANRANPPNEGLHKRARNMERAIERMEKIDKPLLHRNKMGL
DIETADRSGKDVVRLEDVKKRFEEHLLFENVNMHIRYQERVAIIGENGTGKSTLIKILLQSQQPDVGTVYIGNNVKIGYL
SQHVFQDINPTKTVIEVFREQIAVEEGRARYILAQFLFYGYAVFRKVSELSGGEKMRLRLAQLMYEDINTLVLDEPTNHL
DIDSREVLEEALENFQGTIIAVSHDRYFLDKIFRRIYWIEDKTVYDYDGNYSWAREKMNDNRIKRKEILDIRNNSKQYAT
ISQPIIPVPSKNKEQENLLEQIEKLEQELVTIEGKMEKTMDVDQLMVLQKNKEEIEQLWEHYFLLIEE
>Mature_628_residues
MIACSIQNIKKMYGGNLIFERISLEINENERIGIVGRNGSGKSTLLRLMAKIEDPDEGKIHWRKNTEVGYLEQIQAEMNG
LTVYHVLKSAFETLNDLEIQMQEYEEKMQDTLENVSDLVIQYGEIQERFSFLGGYERDAQIEKVCRGINIISLLELTFQQ
LSGGEKTKVALATILLKQPDFLLLDEPTNHLDISAVEWLASFLNDYPGTVVIVSHDRYFLDETVTKIIDLEDGEAVMYET
NFSNHIKEKESRLLKEFQDYQEQQKKIKKMREAIKRLREWANRANPPNEGLHKRARNMERAIERMEKIDKPLLHRNKMGL
DIETADRSGKDVVRLEDVKKRFEEHLLFENVNMHIRYQERVAIIGENGTGKSTLIKILLQSQQPDVGTVYIGNNVKIGYL
SQHVFQDINPTKTVIEVFREQIAVEEGRARYILAQFLFYGYAVFRKVSELSGGEKMRLRLAQLMYEDINTLVLDEPTNHL
DIDSREVLEEALENFQGTIIAVSHDRYFLDKIFRRIYWIEDKTVYDYDGNYSWAREKMNDNRIKRKEILDIRNNSKQYAT
ISQPIIPVPSKNKEQENLLEQIEKLEQELVTIEGKMEKTMDVDQLMVLQKNKEEIEQLWEHYFLLIEE

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=536, Percent_Identity=29.2910447761194, Blast_Score=236, Evalue=5e-62,
Organism=Homo sapiens, GI10947137, Length=574, Percent_Identity=25.9581881533101, Blast_Score=193, Evalue=5e-49,
Organism=Homo sapiens, GI27881506, Length=535, Percent_Identity=26.7289719626168, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI10947135, Length=527, Percent_Identity=29.2220113851992, Blast_Score=186, Evalue=7e-47,
Organism=Homo sapiens, GI69354671, Length=527, Percent_Identity=29.2220113851992, Blast_Score=186, Evalue=8e-47,
Organism=Homo sapiens, GI255708477, Length=232, Percent_Identity=27.5862068965517, Blast_Score=70, Evalue=5e-12,
Organism=Escherichia coli, GI2367384, Length=526, Percent_Identity=34.9809885931559, Blast_Score=284, Evalue=1e-77,
Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=31.638418079096, Blast_Score=268, Evalue=9e-73,
Organism=Escherichia coli, GI1789751, Length=600, Percent_Identity=29, Blast_Score=264, Evalue=2e-71,
Organism=Escherichia coli, GI1787182, Length=624, Percent_Identity=31.25, Blast_Score=260, Evalue=2e-70,
Organism=Escherichia coli, GI1788506, Length=546, Percent_Identity=20.8791208791209, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI145693107, Length=551, Percent_Identity=22.5045372050817, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1788165, Length=183, Percent_Identity=26.775956284153, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1789891, Length=224, Percent_Identity=23.2142857142857, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788225, Length=227, Percent_Identity=25.5506607929515, Blast_Score=73, Evalue=7e-14,
Organism=Escherichia coli, GI1790739, Length=199, Percent_Identity=27.6381909547739, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1787112, Length=220, Percent_Identity=28.6363636363636, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI48994997, Length=244, Percent_Identity=25.8196721311475, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI1787164, Length=198, Percent_Identity=26.7676767676768, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787758, Length=183, Percent_Identity=29.5081967213115, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1786703, Length=205, Percent_Identity=28.2926829268293, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI48995001, Length=229, Percent_Identity=25.3275109170306, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081709, Length=198, Percent_Identity=26.7676767676768, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081834, Length=216, Percent_Identity=26.8518518518519, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1788761, Length=196, Percent_Identity=27.0408163265306, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1789963, Length=316, Percent_Identity=23.4177215189873, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1787029, Length=223, Percent_Identity=26.0089686098655, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17559834, Length=543, Percent_Identity=28.7292817679558, Blast_Score=217, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17553372, Length=528, Percent_Identity=31.0606060606061, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17555318, Length=563, Percent_Identity=26.1101243339254, Blast_Score=195, Evalue=8e-50,
Organism=Saccharomyces cerevisiae, GI6320874, Length=555, Percent_Identity=29.009009009009, Blast_Score=226, Evalue=9e-60,
Organism=Saccharomyces cerevisiae, GI6321121, Length=539, Percent_Identity=28.9424860853432, Blast_Score=219, Evalue=1e-57,
Organism=Saccharomyces cerevisiae, GI6325030, Length=399, Percent_Identity=27.3182957393484, Blast_Score=131, Evalue=4e-31,
Organism=Saccharomyces cerevisiae, GI6323278, Length=396, Percent_Identity=26.2626262626263, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6324314, Length=396, Percent_Identity=27.2727272727273, Blast_Score=118, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24666836, Length=537, Percent_Identity=30.5400372439479, Blast_Score=239, Evalue=6e-63,
Organism=Drosophila melanogaster, GI24641342, Length=552, Percent_Identity=29.8913043478261, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24642252, Length=540, Percent_Identity=26.1111111111111, Blast_Score=194, Evalue=2e-49,
Organism=Drosophila melanogaster, GI18859989, Length=540, Percent_Identity=26.1111111111111, Blast_Score=194, Evalue=2e-49,
Organism=Drosophila melanogaster, GI221500365, Length=241, Percent_Identity=27.3858921161826, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI116007184, Length=241, Percent_Identity=27.3858921161826, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24659289, Length=182, Percent_Identity=28.021978021978, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI17136662, Length=267, Percent_Identity=27.3408239700375, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281363262, Length=185, Percent_Identity=28.1081081081081, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24653245, Length=185, Percent_Identity=28.1081081081081, Blast_Score=66, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 73518; Mature: 73518

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIACSIQNIKKMYGGNLIFERISLEINENERIGIVGRNGSGKSTLLRLMAKIEDPDEGKI
CEEECHHHHHHHHCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCE
HWRKNTEVGYLEQIQAEMNGLTVYHVLKSAFETLNDLEIQMQEYEEKMQDTLENVSDLVI
EEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYGEIQERFSFLGGYERDAQIEKVCRGINIISLLELTFQQLSGGEKTKVALATILLKQPD
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
FLLLDEPTNHLDISAVEWLASFLNDYPGTVVIVSHDRYFLDETVTKIIDLEDGEAVMYET
EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEC
NFSNHIKEKESRLLKEFQDYQEQQKKIKKMREAIKRLREWANRANPPNEGLHKRARNMER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AIERMEKIDKPLLHRNKMGLDIETADRSGKDVVRLEDVKKRFEEHLLFENVNMHIRYQER
HHHHHHHHCHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEE
VAIIGENGTGKSTLIKILLQSQQPDVGTVYIGNNVKIGYLSQHVFQDINPTKTVIEVFRE
EEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHCCCHHHHHHHHHHH
QIAVEEGRARYILAQFLFYGYAVFRKVSELSGGEKMRLRLAQLMYEDINTLVLDEPTNHL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCC
DIDSREVLEEALENFQGTIIAVSHDRYFLDKIFRRIYWIEDKTVYDYDGNYSWAREKMND
CCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHEEEECCEEEECCCCCHHHHHHHCC
NRIKRKEILDIRNNSKQYATISQPIIPVPSKNKEQENLLEQIEKLEQELVTIEGKMEKTM
CHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHC
DVDQLMVLQKNKEEIEQLWEHYFLLIEE
CHHHHHHHHCCHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MIACSIQNIKKMYGGNLIFERISLEINENERIGIVGRNGSGKSTLLRLMAKIEDPDEGKI
CEEECHHHHHHHHCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCE
HWRKNTEVGYLEQIQAEMNGLTVYHVLKSAFETLNDLEIQMQEYEEKMQDTLENVSDLVI
EEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYGEIQERFSFLGGYERDAQIEKVCRGINIISLLELTFQQLSGGEKTKVALATILLKQPD
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
FLLLDEPTNHLDISAVEWLASFLNDYPGTVVIVSHDRYFLDETVTKIIDLEDGEAVMYET
EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEC
NFSNHIKEKESRLLKEFQDYQEQQKKIKKMREAIKRLREWANRANPPNEGLHKRARNMER
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AIERMEKIDKPLLHRNKMGLDIETADRSGKDVVRLEDVKKRFEEHLLFENVNMHIRYQER
HHHHHHHHCHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEE
VAIIGENGTGKSTLIKILLQSQQPDVGTVYIGNNVKIGYLSQHVFQDINPTKTVIEVFRE
EEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHCCCHHHHHHHHHHH
QIAVEEGRARYILAQFLFYGYAVFRKVSELSGGEKMRLRLAQLMYEDINTLVLDEPTNHL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCC
DIDSREVLEEALENFQGTIIAVSHDRYFLDKIFRRIYWIEDKTVYDYDGNYSWAREKMND
CCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHEEEECCEEEECCCCCHHHHHHHCC
NRIKRKEILDIRNNSKQYATISQPIIPVPSKNKEQENLLEQIEKLEQELVTIEGKMEKTM
CHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHC
DVDQLMVLQKNKEEIEQLWEHYFLLIEE
CHHHHHHHHCCHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]