Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is frwC [H]
Identifier: 229013120
GI number: 229013120
Start: 4199197
End: 4200279
Strand: Direct
Name: frwC [H]
Synonym: y3777
Alternate gene names: 229013120
Gene position: 4199197-4200279 (Clockwise)
Preceding gene: 22127646
Following gene: 22127650
Centisome position: 91.27
GC content: 53.74
Gene sequence:
>1083_bases ATGAAAGAGCTGATAAATATACTTAAAAATACGCGCCAACATCTGATGACGGGCGTTTCATATATGATCCCTTTTGTGGT TGCTGGCGGTATTTTGCTAGCACTTTCTGTGATGCTTTACGGTAAAGGTGCGGTGCCAGAGGTTGCCAGTGACCCTAATT TGAAAAAGCTATTCGATATTGGTGTCGTGGGCTTGACGTTGATGGTGCCATTTTTGGCAGCCTATATCGGTTACGCCATT GCGGATCGTGCGGCGCTCGCCCCGGCGGCTATCGGTGCTTGGGTAGGGGCTTCTTTCGGGGCTGGTTTTTTTGGTGCCAT TATCGCGGGCTTGCTGGGCGGTATTATCGTTTTCTATCTGAAGAAGATCTCCGTGCCAAAGACGCTGCGTTCGGTGATGC CGATCTTCGTGATCCCGATCGTCGGTACCCTTCTCACCGCTGGGATCATGATGTGGGGCTTGGGTGAACCCATCGGCATC CTGACAGCCAACCTCACGCAATGGCTACAGGGTATGCAGCAAGGAAGCGTTATATTACTGGCAATTATTATGGGCCTGAT GCTGGCGTTTGACATGGGCGGGCCGGTCAACAAGGTGGCTTATGCCTTTATGTTGATCTGTGTGGCGCAGGGTGTTTATA CCTTGGTGGCCGTCGCCGCCGTCGCCATTGCAACCCCGCCGTTGGGCATGGGCCTTGCCACGCTGATTGGCCGTAAATAT TACTCGGTGGAAGAACGTGAAGCAGGTAAGGCCGCGATGCTGATGGGCTGCGTTGGCATTACTGAGGGGGCCATCCCGTT TGCCGCCGCCGATCCACTGCGTGTCATTCCTGCCAATATGATCGGTTCCGCCTGCGCCGCCGTAACTGCCGTGTTGTTCG GTGTCCAGTGCTATGCCGCTTGGGGAGGGTTGATCGTGCTACCGGTGGTCGACGGTAAACTGGGCTTTGTGGTGGCCTTG TTAGTCGGCATGGTCGTTACCGCGTTGATAGCCAATCTATTAAAGCGTTTCACCGCCCAAAAGCAGCCGGGAAGGTCATC AGCAGAGGGCGATGTGAACATGGATTTCGATATTAAAAATTAG
Upstream 100 bases:
>100_bases CCAACAGCATCAAAAACATTTCGCGATTTCAATATTAAGGGGAATAAGCCCTGACGCCTGCGGAACTCATCGCACACGGA TGAACGCTATGGAGTGAATG
Downstream 100 bases:
>100_bases CGGTACACCCGATGAGCGTTATTTATTTTAAGGTCAACGACATTTTAAGGTCAACAACCGGTAAGTGATTCGGGCGAGTG AGCGCAGCTAACACCCCTGT
Product: putative fructose-like permease EIIC subunit 2
Products: NA
Alternate protein names: PTS system fructose-like EIIC component 2 [H]
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MKELINILKNTRQHLMTGVSYMIPFVVAGGILLALSVMLYGKGAVPEVASDPNLKKLFDIGVVGLTLMVPFLAAYIGYAI ADRAALAPAAIGAWVGASFGAGFFGAIIAGLLGGIIVFYLKKISVPKTLRSVMPIFVIPIVGTLLTAGIMMWGLGEPIGI LTANLTQWLQGMQQGSVILLAIIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTLVAVAAVAIATPPLGMGLATLIGRKY YSVEEREAGKAAMLMGCVGITEGAIPFAAADPLRVIPANMIGSACAAVTAVLFGVQCYAAWGGLIVLPVVDGKLGFVVAL LVGMVVTALIANLLKRFTAQKQPGRSSAEGDVNMDFDIKN
Sequences:
>Translated_360_residues MKELINILKNTRQHLMTGVSYMIPFVVAGGILLALSVMLYGKGAVPEVASDPNLKKLFDIGVVGLTLMVPFLAAYIGYAI ADRAALAPAAIGAWVGASFGAGFFGAIIAGLLGGIIVFYLKKISVPKTLRSVMPIFVIPIVGTLLTAGIMMWGLGEPIGI LTANLTQWLQGMQQGSVILLAIIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTLVAVAAVAIATPPLGMGLATLIGRKY YSVEEREAGKAAMLMGCVGITEGAIPFAAADPLRVIPANMIGSACAAVTAVLFGVQCYAAWGGLIVLPVVDGKLGFVVAL LVGMVVTALIANLLKRFTAQKQPGRSSAEGDVNMDFDIKN >Mature_360_residues MKELINILKNTRQHLMTGVSYMIPFVVAGGILLALSVMLYGKGAVPEVASDPNLKKLFDIGVVGLTLMVPFLAAYIGYAI ADRAALAPAAIGAWVGASFGAGFFGAIIAGLLGGIIVFYLKKISVPKTLRSVMPIFVIPIVGTLLTAGIMMWGLGEPIGI LTANLTQWLQGMQQGSVILLAIIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTLVAVAAVAIATPPLGMGLATLIGRKY YSVEEREAGKAAMLMGCVGITEGAIPFAAADPLRVIPANMIGSACAAVTAVLFGVQCYAAWGGLIVLPVVDGKLGFVVAL LVGMVVTALIANLLKRFTAQKQPGRSSAEGDVNMDFDIKN
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane [H]
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790386, Length=359, Percent_Identity=76.3231197771588, Blast_Score=535, Evalue=1e-153, Organism=Escherichia coli, GI1788492, Length=329, Percent_Identity=40.7294832826748, Blast_Score=219, Evalue=3e-58, Organism=Escherichia coli, GI1786951, Length=278, Percent_Identity=36.6906474820144, Blast_Score=172, Evalue=4e-44, Organism=Escherichia coli, GI87082348, Length=298, Percent_Identity=36.5771812080537, Blast_Score=165, Evalue=5e-42, Organism=Escherichia coli, GI1788729, Length=372, Percent_Identity=25.5376344086022, Blast_Score=107, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013014 - InterPro: IPR006327 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37453; Mature: 37453
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELINILKNTRQHLMTGVSYMIPFVVAGGILLALSVMLYGKGAVPEVASDPNLKKLFDI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH GVVGLTLMVPFLAAYIGYAIADRAALAPAAIGAWVGASFGAGFFGAIIAGLLGGIIVFYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KKISVPKTLRSVMPIFVIPIVGTLLTAGIMMWGLGEPIGILTANLTQWLQGMQQGSVILL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH AIIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTLVAVAAVAIATPPLGMGLATLIGRKY HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH YSVEEREAGKAAMLMGCVGITEGAIPFAAADPLRVIPANMIGSACAAVTAVLFGVQCYAA CCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH WGGLIVLPVVDGKLGFVVALLVGMVVTALIANLLKRFTAQKQPGRSSAEGDVNMDFDIKN HCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECC >Mature Secondary Structure MKELINILKNTRQHLMTGVSYMIPFVVAGGILLALSVMLYGKGAVPEVASDPNLKKLFDI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH GVVGLTLMVPFLAAYIGYAIADRAALAPAAIGAWVGASFGAGFFGAIIAGLLGGIIVFYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KKISVPKTLRSVMPIFVIPIVGTLLTAGIMMWGLGEPIGILTANLTQWLQGMQQGSVILL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH AIIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTLVAVAAVAIATPPLGMGLATLIGRKY HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH YSVEEREAGKAAMLMGCVGITEGAIPFAAADPLRVIPANMIGSACAAVTAVLFGVQCYAA CCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH WGGLIVLPVVDGKLGFVVALLVGMVVTALIANLLKRFTAQKQPGRSSAEGDVNMDFDIKN HCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7773398 [H]