| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is malT [H]
Identifier: 22127771
GI number: 22127771
Start: 4354117
End: 4356828
Strand: Reverse
Name: malT [H]
Synonym: y3900
Alternate gene names: 22127771
Gene position: 4356828-4354117 (Counterclockwise)
Preceding gene: 22127773
Following gene: 161484729
Centisome position: 94.7
GC content: 51.07
Gene sequence:
>2712_bases ATGCTGATTCCATCCAAACTGAGCCGCCCGGTACGGCTGCAAAATACCGTAGTACGTGACCGCCTGCTGGTTAAATTATC CAGTGCCGCTAACTATCGGCTGACGTTAATTAACTGTCCGGCAGGGTACGGTAAAACGACGCTCATCGCCCAGTGGGCAG CCGATCAATCCAACCTCGGTTGGTATTCTCTGGATGAAAGCGATAACCAATCAGAACGCTTTGCCACCTATCTGATCGCG GCCATACAATTAGCGACTGGTGGACATTGCAGCAAAAGTGAAGCACTCAGTCAAAAACATCAATATGCCAATCTCTCGGC GTTGTTCTCGCAATTATTTATTGAGCTGTCCAATTGGGACGGCCCCCTTTATCTGGTCATCGATGACTATCATCTGATTA CCAATGACGCTATCCATGAAGCGATGCGTTTTTTCTTGCGCCACCAGCCGGAAAACCTGACGCTGATCATACTCTCCCGG ACCTTGCCATCGCTGGGTATTGCTAACCTGCGAGTGCGTGATCAACTGCTGGAACTGGGGATGCAGCAACTGGCGTTCAA TCATCACGAGGCGCAGCAATTCTTTGAATGCCGACTGTCTTCGCCACTGGAGCAAGGTGACAGTAGCCGCCTGTGTGATG AAGTCGAAGGTTGGGTAACCGCACTGCAACTGATTGCCTTGTCATCACGCCAACCCAATTCCTCAGCACAAAAATCGGCT AAGCGCCTGGCTGGTCTCAATGCCAGCCATCTGTCGGATTATCTGGTCGATGAAGTCCTGGATCAGGTAGATAGTAAGGC CCGTGCTTTTCTACTGCGTTGCTCTGTATTACGCTCGATGAACGATGCCCTGATTGTTCGCCTGACCGGTGAAGACAACG GGCAACAACTGTTGGAAGAGCTGGAACGTCAGGGTTTGTTTATTCATCGTATGGATGACAGTGCTGAATGGTTCTGTTTC CATCCCTTATTTGCCACCTTCCTACGCCAGCGTTGCCAGTGGGAATTAGCCTTGGAACTGCCGGAATTACATCACGCGGC GGCAGAGGGCTGGATGGCACTTGGCTATCCGGCGGAGGCTATCCACCACGCTTTAGCCGCCGGTGACGTCGGCATGCTAC GCGATATCTTGTTGCAACATGCCTGGTCGTTATTCCACCACAGCGAATTGGCGTTGTTGGAACAGTGCCTGACGGCCCTA CCGTATCCGCTCTTAGTCCAGAACCCGGAACTGGCCTTACTACAAGCCTGGCTGGCACAAAGTCAGCACCGCTACAGTGA AGTGAATACTCTGCTTGAGCAGGCAGAATTAGCCATGCAAGAACGTAAGATCCCGGTAGATGAAATCTTACGCGCTGAGT TTGGTGCGTTGCGCGCTCAGGTGGCTATCAACGCGGGTAAGCCGGATGAAGCGGAAAAATTGGCGACCGATGCGCTAAAA TATCTGCCAATGGCGCACTATTACAGCCGAATTGTCGCCACCTCCGTGACTGGCGAAGTCCATCATTGTAAAGGGGAACT GGCCCGCGCCCTACCGATGATGCAGCAAACCGAACAAATGGCCCGCCGCCATGAAGCCTATCACTACGCCTTATGGGCAT TACTGCAACAAAGTGAAATCCTGATTGCTCAGGGGTTCCTGCAAGCCGCTTATGAGACCCAAGAGAAAGCCTTCGAATTA ATACGTGAACAGCATCTTGAGCAACTGCCAATGCATGAGTTCCTGCTGCGGATCCGCTCCCAGGTATTATGGTCATGGTC ACGGCTGGATGAGGCAGAAGAAGCGGCCCGTAAAGGGGTCGAGATTCTGGCTAACTATCAGCCACAACAGCAATTACAGT GTCTGGCGATGCTGGCGAAGTGTTCACTGGCCCGTGGCGATCTGGATAACGCCAACGTGTATATTCAGCGCTGTGAAGCC CTGCAACATGGTAGCCAGTATCACCTTGATTGGATAACCAATGCGGATAAACCACGGGTGATCCATTGGCAGATGACCGG GGATAAGGTGGCCGCGGCAAGCTGGCTACGCCAGACAGAAAAACCGGGCATGGCGGATAACCACTTCTTGCAGGGCCAGT GGCGCAATATTGCCAGAGTACAGATAATACTGGGCCGTTTTGATGAAGCTGAAGTGGTCTTAGATGAACTCAATGAGAAT GCTCGCCGCTTACGCCTGACCAGTGACTTAAACCGTAACTTGCTGTTAAGCAACACGCTTTATTGGCAGACAGAACGCAA AGGTGAGGCACAGAAAGCGCTGATTGAATCACTGACCTTAGCCAACCGTACCGGTTTTATCAGTCATTTTGTGATTGAAG GTGAAGCCATGGCGCAACAACTGCGCCAACTGATCCAACTCAATGCCTTACCTGAATTAGAACAACACCGCGCGCAGCGT ATTTTGAAGGATATTAACCAGCACCATCGGCATAAATTCGCGCATTTCGACGAAATTTTTGTTGATAAATTGCTCACTCA TCCACAAGTTCCCGAACTCATCCGGACCAGCCCGTTAACACAACGGGAATGGCAAGTATTGGGACTGATCTATTCTGGCT ACAGTAATGATCAAATAGCCAATGAACTGGATGTCGCGGCCACCACGATAAAAACGCATATCCGTAATTTGTATCAAAAA TTGGGCGTCGCTCACCGGCAGGAAGCCGTACAACAAGCCCAACGTTTATTGCAGATGATGGGATATGTCTAA
Upstream 100 bases:
>100_bases AAATAATTACTCTTATGAATGCCTGTCACTTTTTCCGACATATTGATACGTTAACCCTTGGGGATTTTTCTAACCAAATA TCTTTTCCAGCGGACACAGA
Downstream 100 bases:
>100_bases CGGGCGCACACGTGTTTGATGATATGACCATGAGAGGGTGGCTCGGACCAGGCGACAGTTTAAATAAGTTTAACAATCAG TCGATTAAAATAAGACCATT
Product: transcriptional regulator MalT
Products: NA
Alternate protein names: ATP-dependent transcriptional activator malT [H]
Number of amino acids: Translated: 903; Mature: 903
Protein sequence:
>903_residues MLIPSKLSRPVRLQNTVVRDRLLVKLSSAANYRLTLINCPAGYGKTTLIAQWAADQSNLGWYSLDESDNQSERFATYLIA AIQLATGGHCSKSEALSQKHQYANLSALFSQLFIELSNWDGPLYLVIDDYHLITNDAIHEAMRFFLRHQPENLTLIILSR TLPSLGIANLRVRDQLLELGMQQLAFNHHEAQQFFECRLSSPLEQGDSSRLCDEVEGWVTALQLIALSSRQPNSSAQKSA KRLAGLNASHLSDYLVDEVLDQVDSKARAFLLRCSVLRSMNDALIVRLTGEDNGQQLLEELERQGLFIHRMDDSAEWFCF HPLFATFLRQRCQWELALELPELHHAAAEGWMALGYPAEAIHHALAAGDVGMLRDILLQHAWSLFHHSELALLEQCLTAL PYPLLVQNPELALLQAWLAQSQHRYSEVNTLLEQAELAMQERKIPVDEILRAEFGALRAQVAINAGKPDEAEKLATDALK YLPMAHYYSRIVATSVTGEVHHCKGELARALPMMQQTEQMARRHEAYHYALWALLQQSEILIAQGFLQAAYETQEKAFEL IREQHLEQLPMHEFLLRIRSQVLWSWSRLDEAEEAARKGVEILANYQPQQQLQCLAMLAKCSLARGDLDNANVYIQRCEA LQHGSQYHLDWITNADKPRVIHWQMTGDKVAAASWLRQTEKPGMADNHFLQGQWRNIARVQIILGRFDEAEVVLDELNEN ARRLRLTSDLNRNLLLSNTLYWQTERKGEAQKALIESLTLANRTGFISHFVIEGEAMAQQLRQLIQLNALPELEQHRAQR ILKDINQHHRHKFAHFDEIFVDKLLTHPQVPELIRTSPLTQREWQVLGLIYSGYSNDQIANELDVAATTIKTHIRNLYQK LGVAHRQEAVQQAQRLLQMMGYV
Sequences:
>Translated_903_residues MLIPSKLSRPVRLQNTVVRDRLLVKLSSAANYRLTLINCPAGYGKTTLIAQWAADQSNLGWYSLDESDNQSERFATYLIA AIQLATGGHCSKSEALSQKHQYANLSALFSQLFIELSNWDGPLYLVIDDYHLITNDAIHEAMRFFLRHQPENLTLIILSR TLPSLGIANLRVRDQLLELGMQQLAFNHHEAQQFFECRLSSPLEQGDSSRLCDEVEGWVTALQLIALSSRQPNSSAQKSA KRLAGLNASHLSDYLVDEVLDQVDSKARAFLLRCSVLRSMNDALIVRLTGEDNGQQLLEELERQGLFIHRMDDSAEWFCF HPLFATFLRQRCQWELALELPELHHAAAEGWMALGYPAEAIHHALAAGDVGMLRDILLQHAWSLFHHSELALLEQCLTAL PYPLLVQNPELALLQAWLAQSQHRYSEVNTLLEQAELAMQERKIPVDEILRAEFGALRAQVAINAGKPDEAEKLATDALK YLPMAHYYSRIVATSVTGEVHHCKGELARALPMMQQTEQMARRHEAYHYALWALLQQSEILIAQGFLQAAYETQEKAFEL IREQHLEQLPMHEFLLRIRSQVLWSWSRLDEAEEAARKGVEILANYQPQQQLQCLAMLAKCSLARGDLDNANVYIQRCEA LQHGSQYHLDWITNADKPRVIHWQMTGDKVAAASWLRQTEKPGMADNHFLQGQWRNIARVQIILGRFDEAEVVLDELNEN ARRLRLTSDLNRNLLLSNTLYWQTERKGEAQKALIESLTLANRTGFISHFVIEGEAMAQQLRQLIQLNALPELEQHRAQR ILKDINQHHRHKFAHFDEIFVDKLLTHPQVPELIRTSPLTQREWQVLGLIYSGYSNDQIANELDVAATTIKTHIRNLYQK LGVAHRQEAVQQAQRLLQMMGYV >Mature_903_residues MLIPSKLSRPVRLQNTVVRDRLLVKLSSAANYRLTLINCPAGYGKTTLIAQWAADQSNLGWYSLDESDNQSERFATYLIA AIQLATGGHCSKSEALSQKHQYANLSALFSQLFIELSNWDGPLYLVIDDYHLITNDAIHEAMRFFLRHQPENLTLIILSR TLPSLGIANLRVRDQLLELGMQQLAFNHHEAQQFFECRLSSPLEQGDSSRLCDEVEGWVTALQLIALSSRQPNSSAQKSA KRLAGLNASHLSDYLVDEVLDQVDSKARAFLLRCSVLRSMNDALIVRLTGEDNGQQLLEELERQGLFIHRMDDSAEWFCF HPLFATFLRQRCQWELALELPELHHAAAEGWMALGYPAEAIHHALAAGDVGMLRDILLQHAWSLFHHSELALLEQCLTAL PYPLLVQNPELALLQAWLAQSQHRYSEVNTLLEQAELAMQERKIPVDEILRAEFGALRAQVAINAGKPDEAEKLATDALK YLPMAHYYSRIVATSVTGEVHHCKGELARALPMMQQTEQMARRHEAYHYALWALLQQSEILIAQGFLQAAYETQEKAFEL IREQHLEQLPMHEFLLRIRSQVLWSWSRLDEAEEAARKGVEILANYQPQQQLQCLAMLAKCSLARGDLDNANVYIQRCEA LQHGSQYHLDWITNADKPRVIHWQMTGDKVAAASWLRQTEKPGMADNHFLQGQWRNIARVQIILGRFDEAEVVLDELNEN ARRLRLTSDLNRNLLLSNTLYWQTERKGEAQKALIESLTLANRTGFISHFVIEGEAMAQQLRQLIQLNALPELEQHRAQR ILKDINQHHRHKFAHFDEIFVDKLLTHPQVPELIRTSPLTQREWQVLGLIYSGYSNDQIANELDVAATTIKTHIRNLYQK LGVAHRQEAVQQAQRLLQMMGYV
Specific function: Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides. Binds and recognizes a DNA motif (called the malT box):5'-GGA[TG]GA-3' [H]
COG id: COG2909
COG function: function code K; ATP-dependent transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI2367223, Length=902, Percent_Identity=74.5011086474501, Blast_Score=1363, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016032 - InterPro: IPR011990 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE [H]
EC number: NA
Molecular weight: Translated: 103166; Mature: 103166
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIPSKLSRPVRLQNTVVRDRLLVKLSSAANYRLTLINCPAGYGKTTLIAQWAADQSNLG CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCC WYSLDESDNQSERFATYLIAAIQLATGGHCSKSEALSQKHQYANLSALFSQLFIELSNWD EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GPLYLVIDDYHLITNDAIHEAMRFFLRHQPENLTLIILSRTLPSLGIANLRVRDQLLELG CCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH MQQLAFNHHEAQQFFECRLSSPLEQGDSSRLCDEVEGWVTALQLIALSSRQPNSSAQKSA HHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH KRLAGLNASHLSDYLVDEVLDQVDSKARAFLLRCSVLRSMNDALIVRLTGEDNGQQLLEE HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHH LERQGLFIHRMDDSAEWFCFHPLFATFLRQRCQWELALELPELHHAAAEGWMALGYPAEA HHHCCEEEEEECCCCCEEEHHHHHHHHHHHHCCCHHEECCHHHHHHHHCCCEEECCCHHH IHHALAAGDVGMLRDILLQHAWSLFHHSELALLEQCLTALPYPLLVQNPELALLQAWLAQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHH SQHRYSEVNTLLEQAELAMQERKIPVDEILRAEFGALRAQVAINAGKPDEAEKLATDALK HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHH YLPMAHYYSRIVATSVTGEVHHCKGELARALPMMQQTEQMARRHEAYHYALWALLQQSEI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH LIAQGFLQAAYETQEKAFELIREQHLEQLPMHEFLLRIRSQVLWSWSRLDEAEEAARKGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH EILANYQPQQQLQCLAMLAKCSLARGDLDNANVYIQRCEALQHGSQYHLDWITNADKPRV HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEE IHWQMTGDKVAAASWLRQTEKPGMADNHFLQGQWRNIARVQIILGRFDEAEVVLDELNEN EEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHEEEHEECCCCHHHHHHHHHCCC ARRLRLTSDLNRNLLLSNTLYWQTERKGEAQKALIESLTLANRTGFISHFVIEGEAMAQQ HHHEEEHHCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHEECCHHHHHH LRQLIQLNALPELEQHRAQRILKDINQHHRHKFAHFDEIFVDKLLTHPQVPELIRTSPLT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC QREWQVLGLIYSGYSNDQIANELDVAATTIKTHIRNLYQKLGVAHRQEAVQQAQRLLQMM HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH GYV CCC >Mature Secondary Structure MLIPSKLSRPVRLQNTVVRDRLLVKLSSAANYRLTLINCPAGYGKTTLIAQWAADQSNLG CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCC WYSLDESDNQSERFATYLIAAIQLATGGHCSKSEALSQKHQYANLSALFSQLFIELSNWD EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GPLYLVIDDYHLITNDAIHEAMRFFLRHQPENLTLIILSRTLPSLGIANLRVRDQLLELG CCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH MQQLAFNHHEAQQFFECRLSSPLEQGDSSRLCDEVEGWVTALQLIALSSRQPNSSAQKSA HHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH KRLAGLNASHLSDYLVDEVLDQVDSKARAFLLRCSVLRSMNDALIVRLTGEDNGQQLLEE HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHH LERQGLFIHRMDDSAEWFCFHPLFATFLRQRCQWELALELPELHHAAAEGWMALGYPAEA HHHCCEEEEEECCCCCEEEHHHHHHHHHHHHCCCHHEECCHHHHHHHHCCCEEECCCHHH IHHALAAGDVGMLRDILLQHAWSLFHHSELALLEQCLTALPYPLLVQNPELALLQAWLAQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHH SQHRYSEVNTLLEQAELAMQERKIPVDEILRAEFGALRAQVAINAGKPDEAEKLATDALK HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHH YLPMAHYYSRIVATSVTGEVHHCKGELARALPMMQQTEQMARRHEAYHYALWALLQQSEI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH LIAQGFLQAAYETQEKAFELIREQHLEQLPMHEFLLRIRSQVLWSWSRLDEAEEAARKGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH EILANYQPQQQLQCLAMLAKCSLARGDLDNANVYIQRCEALQHGSQYHLDWITNADKPRV HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEE IHWQMTGDKVAAASWLRQTEKPGMADNHFLQGQWRNIARVQIILGRFDEAEVVLDELNEN EEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHEEEHEECCCCHHHHHHHHHCCC ARRLRLTSDLNRNLLLSNTLYWQTERKGEAQKALIESLTLANRTGFISHFVIEGEAMAQQ HHHEEEHHCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHEECCHHHHHH LRQLIQLNALPELEQHRAQRILKDINQHHRHKFAHFDEIFVDKLLTHPQVPELIRTSPLT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC QREWQVLGLIYSGYSNDQIANELDVAATTIKTHIRNLYQKLGVAHRQEAVQQAQRLLQMM HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH GYV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA