Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is yjgN [H]
Identifier: 22127654
GI number: 22127654
Start: 4203489
End: 4204685
Strand: Direct
Name: yjgN [H]
Synonym: y3783
Alternate gene names: 22127654
Gene position: 4203489-4204685 (Clockwise)
Preceding gene: 229013119
Following gene: 22127655
Centisome position: 91.37
GC content: 44.19
Gene sequence:
>1197_bases ATGGCAGATAACGCCTCACAAAATAAATCGCTACATAGAGTGGCCTTCAAAGGCGAAGGTGGCGAGTATTTCTCTATCTG GTTAGTTAATTTATTACTAACGATAATTACACTGGGTGTTTATTCTGCCTGGGCTACCGTACGTCGTCGCCGTTACTTTT ATGGCAATACTGAGCTAAACGGTGATCGTTTTGATTATCACGCAGAGCCAATCGAGATCCTTAAAGGGCGCTTGATGGTT ATTGGTGGTGTGATTTTATTCTATATATTATTAGCAATTGCCCCAACACTTGGCCTTTTGGTTGCACTGGTGTTGCTGGC ATTGATTCCATGGATTATTATCCGTAGCTGGCGCTACAATGCCATTATGACCAGCTATCGTGGTGTTCGTTTTAATTATC ACTGCCAGACTGGACAGGCTTATTGGGCGTTACTGTTTTGCCCACTGCTGTTAATTCTGGGGCTCTATGCCGTTATAATC GTCATGGCGATGTTTCTAGGTTCTGTTGCCAGCACCCCTTCTACGGCTATAACACTCATTGTTGTTTCTGCGATTCTTCT GGTCCCGCTGCTGGCAGTGATCAATGGCATTGTGAGCACGTTGCAACACAGCCTGTACGTTAATAACCTCTATTTTGGTA ATTCATCTTTTATTAGTACGTTAAAAAAATCAGCATTTATTAAAATCGCCTTTTTCAGTGTGTTGATTTTTATCCCCTTC TTTTTTGTTGCTATGATGTTCGCAGGTGCGTTTTTTGCCGATCTGTTCCAATCTGCCCTGAATGGTTCCATCGCCAACGA AAATAAGACAGCTATGCTGATAATTCAGAATGCCAGCAACCTGCTATTCATGATGCTGATGTTGCTACTCGGCACCATGG TTTCCAGCAGCTACCGCATCGTTGCCCAACGTAATTACCTGTTTAGTCAAACAACATTACAAGGTGACATCAAGCTACGT TCTTCCATGAAACTCCTGTCTTATATGGGCCTGTTAATGACCAACAGCCTGATCACTGTGTGCTCATTGGGGCTTGCCAC ACCAATTGCAGAAGTACGCCATGCACGCTATATGGCTAATGCAACTGAGATTGAAGGTGACTTGTCTTTACTGAATATCC ACGCTCATCAGGACACAGCGAATAGCGCCCTCGCCGAAGAAGCAGTACAAGCACTCGATCTGGGCACTGGCTTTTGA
Upstream 100 bases:
>100_bases TTGTGATTATTATGTGGATATCGTCTATCTCCATAACACCTATTGTGAATGAAAATAGGAACATATAGGCAAATTATATT ACCTATAGGATGAAAGGTTT
Downstream 100 bases:
>100_bases GTAACGATCAGTGATCGTCGAAGGATATTATCAGTACCCTGGCCGGGCCGCCCGCGAGGCGGCCCGACTACTGCTGAATG AAATAGGCGATAACGTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MADNASQNKSLHRVAFKGEGGEYFSIWLVNLLLTIITLGVYSAWATVRRRRYFYGNTELNGDRFDYHAEPIEILKGRLMV IGGVILFYILLAIAPTLGLLVALVLLALIPWIIIRSWRYNAIMTSYRGVRFNYHCQTGQAYWALLFCPLLLILGLYAVII VMAMFLGSVASTPSTAITLIVVSAILLVPLLAVINGIVSTLQHSLYVNNLYFGNSSFISTLKKSAFIKIAFFSVLIFIPF FFVAMMFAGAFFADLFQSALNGSIANENKTAMLIIQNASNLLFMMLMLLLGTMVSSSYRIVAQRNYLFSQTTLQGDIKLR SSMKLLSYMGLLMTNSLITVCSLGLATPIAEVRHARYMANATEIEGDLSLLNIHAHQDTANSALAEEAVQALDLGTGF
Sequences:
>Translated_398_residues MADNASQNKSLHRVAFKGEGGEYFSIWLVNLLLTIITLGVYSAWATVRRRRYFYGNTELNGDRFDYHAEPIEILKGRLMV IGGVILFYILLAIAPTLGLLVALVLLALIPWIIIRSWRYNAIMTSYRGVRFNYHCQTGQAYWALLFCPLLLILGLYAVII VMAMFLGSVASTPSTAITLIVVSAILLVPLLAVINGIVSTLQHSLYVNNLYFGNSSFISTLKKSAFIKIAFFSVLIFIPF FFVAMMFAGAFFADLFQSALNGSIANENKTAMLIIQNASNLLFMMLMLLLGTMVSSSYRIVAQRNYLFSQTTLQGDIKLR SSMKLLSYMGLLMTNSLITVCSLGLATPIAEVRHARYMANATEIEGDLSLLNIHAHQDTANSALAEEAVQALDLGTGF >Mature_397_residues ADNASQNKSLHRVAFKGEGGEYFSIWLVNLLLTIITLGVYSAWATVRRRRYFYGNTELNGDRFDYHAEPIEILKGRLMVI GGVILFYILLAIAPTLGLLVALVLLALIPWIIIRSWRYNAIMTSYRGVRFNYHCQTGQAYWALLFCPLLLILGLYAVIIV MAMFLGSVASTPSTAITLIVVSAILLVPLLAVINGIVSTLQHSLYVNNLYFGNSSFISTLKKSAFIKIAFFSVLIFIPFF FVAMMFAGAFFADLFQSALNGSIANENKTAMLIIQNASNLLFMMLMLLLGTMVSSSYRIVAQRNYLFSQTTLQGDIKLRS SMKLLSYMGLLMTNSLITVCSLGLATPIAEVRHARYMANATEIEGDLSLLNIHAHQDTANSALAEEAVQALDLGTGF
Specific function: Unknown
COG id: COG4269
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48995003, Length=360, Percent_Identity=31.1111111111111, Blast_Score=115, Evalue=4e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010295 [H]
Pfam domain/function: PF05987 DUF898 [H]
EC number: NA
Molecular weight: Translated: 44033; Mature: 43902
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNASQNKSLHRVAFKGEGGEYFSIWLVNLLLTIITLGVYSAWATVRRRRYFYGNTELN CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC GDRFDYHAEPIEILKGRLMVIGGVILFYILLAIAPTLGLLVALVLLALIPWIIIRSWRYN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AIMTSYRGVRFNYHCQTGQAYWALLFCPLLLILGLYAVIIVMAMFLGSVASTPSTAITLI HHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VVSAILLVPLLAVINGIVSTLQHSLYVNNLYFGNSSFISTLKKSAFIKIAFFSVLIFIPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH FFVAMMFAGAFFADLFQSALNGSIANENKTAMLIIQNASNLLFMMLMLLLGTMVSSSYRI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEEE VAQRNYLFSQTTLQGDIKLRSSMKLLSYMGLLMTNSLITVCSLGLATPIAEVRHARYMAN EEECCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ATEIEGDLSLLNIHAHQDTANSALAEEAVQALDLGTGF CHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ADNASQNKSLHRVAFKGEGGEYFSIWLVNLLLTIITLGVYSAWATVRRRRYFYGNTELN CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC GDRFDYHAEPIEILKGRLMVIGGVILFYILLAIAPTLGLLVALVLLALIPWIIIRSWRYN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AIMTSYRGVRFNYHCQTGQAYWALLFCPLLLILGLYAVIIVMAMFLGSVASTPSTAITLI HHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH VVSAILLVPLLAVINGIVSTLQHSLYVNNLYFGNSSFISTLKKSAFIKIAFFSVLIFIPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH FFVAMMFAGAFFADLFQSALNGSIANENKTAMLIIQNASNLLFMMLMLLLGTMVSSSYRI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCEEE VAQRNYLFSQTTLQGDIKLRSSMKLLSYMGLLMTNSLITVCSLGLATPIAEVRHARYMAN EEECCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ATEIEGDLSLLNIHAHQDTANSALAEEAVQALDLGTGF CHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677609; 8253666 [H]