Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is frwD [H]
Identifier: 229013119
GI number: 229013119
Start: 4201033
End: 4201377
Strand: Direct
Name: frwD [H]
Synonym: y3780
Alternate gene names: 229013119
Gene position: 4201033-4201377 (Clockwise)
Preceding gene: 22127650
Following gene: 22127654
Centisome position: 91.31
GC content: 44.64
Gene sequence:
>345_bases ATGACAATTAAGCTGGTCGCGGTAACGGCCTGTGTCAGTGGCGTCGCACATACCTACATGGTCGCGGAGCGGTTAGACAA ACTGTGCTTACAGCTTAAATGGCAACTAAAAGTTGAGACACAAGGTGCATTGGGTGTTGAGTACTCTCTCACTGAAGACG ATATTTTGCAGGCAGATGCGGTGATATTGATAAACGACGTTGCGATTAAAGAGCAAGAGCGCTTTCAGAATTGCCGTTGT GTTCAGGCCGATATACAAACTTTTTTATGTCATCCTGAGAAAATCCTCGCGGCAACCAAAAAAGTCATTTCTTCCCCCAA AACCGTCAGCATTGTCATTAAATAA
Upstream 100 bases:
>100_bases ACACCTAATCCCTGCGCTGCCAGCGATATCAACACCGTTGAGGCCGCAAAAAAATCAGGCCTGTTTGGAGACGAAACAGG TGATCAAATCAGGAGGGGGC
Downstream 100 bases:
>100_bases CATCTCTTTCCATCATATTACTGCGATATTGTTGGCGATATTCTGATGGTGTCAACTCAGTCTCTTTACGGAATAACCTA CAAAAATAGTTGCTATCAAT
Product: putative fructose-like phosphotransferase EIIB subunit 3
Products: NA
Alternate protein names: PTS system fructose-like EIIB component 3 [H]
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MTIKLVAVTACVSGVAHTYMVAERLDKLCLQLKWQLKVETQGALGVEYSLTEDDILQADAVILINDVAIKEQERFQNCRC VQADIQTFLCHPEKILAATKKVISSPKTVSIVIK
Sequences:
>Translated_114_residues MTIKLVAVTACVSGVAHTYMVAERLDKLCLQLKWQLKVETQGALGVEYSLTEDDILQADAVILINDVAIKEQERFQNCRC VQADIQTFLCHPEKILAATKKVISSPKTVSIVIK >Mature_113_residues TIKLVAVTACVSGVAHTYMVAERLDKLCLQLKWQLKVETQGALGVEYSLTEDDILQADAVILINDVAIKEQERFQNCRCV QADIQTFLCHPEKILAATKKVISSPKTVSIVIK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane [H]
COG id: COG1445
COG function: function code G; Phosphotransferase system fructose-specific component IIB
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790390, Length=110, Percent_Identity=52.7272727272727, Blast_Score=129, Evalue=3e-32, Organism=Escherichia coli, GI1790387, Length=94, Percent_Identity=45.7446808510638, Blast_Score=91, Evalue=2e-20, Organism=Escherichia coli, GI1786951, Length=107, Percent_Identity=38.3177570093458, Blast_Score=73, Evalue=4e-15, Organism=Escherichia coli, GI1788730, Length=109, Percent_Identity=33.9449541284404, Blast_Score=68, Evalue=1e-13, Organism=Escherichia coli, GI87082348, Length=73, Percent_Identity=43.8356164383562, Blast_Score=66, Evalue=6e-13, Organism=Escherichia coli, GI1788492, Length=66, Percent_Identity=40.9090909090909, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003353 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 12645; Mature: 12514
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKLVAVTACVSGVAHTYMVAERLDKLCLQLKWQLKVETQGALGVEYSLTEDDILQADA CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEEECCCCHHHCCCE VILINDVAIKEQERFQNCRCVQADIQTFLCHPEKILAATKKVISSPKTVSIVIK EEEEECHHHCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure TIKLVAVTACVSGVAHTYMVAERLDKLCLQLKWQLKVETQGALGVEYSLTEDDILQADA EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCEEEECCCCHHHCCCE VILINDVAIKEQERFQNCRCVQADIQTFLCHPEKILAATKKVISSPKTVSIVIK EEEEECHHHCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7773398 [H]