The gene/protein map for NC_004088 is currently unavailable.
Definition Yersinia pestis KIM 10 chromosome, complete genome.
Accession NC_004088
Length 4,600,755

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The map label for this gene is 22127535

Identifier: 22127535

GI number: 22127535

Start: 4068872

End: 4069246

Strand: Reverse

Name: 22127535

Synonym: y3661

Alternate gene names: NA

Gene position: 4069246-4068872 (Counterclockwise)

Preceding gene: 22127536

Following gene: 22127534

Centisome position: 88.45

GC content: 52.8

Gene sequence:

>375_bases
TTGCAGGTTGTTGCGGCTCCTCTCATCAATCCTGGGCCCAACGGTCAGGCACAGCCCTTGAAGGTATGCATTATTGAGCT
GAATAAAGAGGGGTGGTCACCCCCCGGTTTGTATCAGGGGACGCTCTGCAGTGGCATCAGTGTAGGAGGTGAAGTCGTCA
GCGTGACGGAATACATCCTTGCGCCGACAGAGGTGCGTCAATATTCCCGCGATGTTCCCTTTGAACAAGAGCGCTGGTGG
GCAATAGCGGCTGAGTTTCAGGAGATGAGTAACGGTAAAAGCCTATTAACGCTGAAATCTGATGCCCGTGCGGACTTCAA
CCGTGTGGTGCTCGTTGATGGTAAGGCCCTGTCATTAAAAGCGTCAACAAAGTAG

Upstream 100 bases:

>100_bases
TGTGTTGCCTATTTTTATCCTGACAGGTTGCGTCCTGCTCAGCGGCTGTAGCTGGTTTTCCTCATCCTCAGAAGCGGCGC
TACAGAAACGGCGGATTGAC

Downstream 100 bases:

>100_bases
GTCATCAAGAGCGTCAACAGACTGGCAAGTGTCAATAGACTGGCAAGTGTCAACAGACTGGAAAGCGTCAATAGACTAAA
AAGTTTCAACAGACTAAAAA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MQVVAAPLINPGPNGQAQPLKVCIIELNKEGWSPPGLYQGTLCSGISVGGEVVSVTEYILAPTEVRQYSRDVPFEQERWW
AIAAEFQEMSNGKSLLTLKSDARADFNRVVLVDGKALSLKASTK

Sequences:

>Translated_124_residues
MQVVAAPLINPGPNGQAQPLKVCIIELNKEGWSPPGLYQGTLCSGISVGGEVVSVTEYILAPTEVRQYSRDVPFEQERWW
AIAAEFQEMSNGKSLLTLKSDARADFNRVVLVDGKALSLKASTK
>Mature_124_residues
MQVVAAPLINPGPNGQAQPLKVCIIELNKEGWSPPGLYQGTLCSGISVGGEVVSVTEYILAPTEVRQYSRDVPFEQERWW
AIAAEFQEMSNGKSLLTLKSDARADFNRVVLVDGKALSLKASTK

Specific function: Unknown

COG id: COG3521

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13477; Mature: 13477

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVVAAPLINPGPNGQAQPLKVCIIELNKEGWSPPGLYQGTLCSGISVGGEVVSVTEYIL
CCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHC
APTEVRQYSRDVPFEQERWWAIAAEFQEMSNGKSLLTLKSDARADFNRVVLVDGKALSLK
CCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCEEEEE
ASTK
ECCC
>Mature Secondary Structure
MQVVAAPLINPGPNGQAQPLKVCIIELNKEGWSPPGLYQGTLCSGISVGGEVVSVTEYIL
CCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHC
APTEVRQYSRDVPFEQERWWAIAAEFQEMSNGKSLLTLKSDARADFNRVVLVDGKALSLK
CCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCEEEEE
ASTK
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA