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The map label for this gene is 22127534

Identifier: 22127534

GI number: 22127534

Start: 4067397

End: 4068770

Strand: Reverse

Name: 22127534

Synonym: y3660

Alternate gene names: NA

Gene position: 4068770-4067397 (Counterclockwise)

Preceding gene: 22127535

Following gene: 22127533

Centisome position: 88.44

GC content: 50.51

Gene sequence:

>1374_bases
TTGCAAAGGACTCATAATATGCTGCCAAAACAACGTGTTGCTTGGGTGGAAGGGATGCTGATGGAACCCCAGCATTTTCA
ACAACAGGAACGATATCTAGAACATTTAACTGAAATGCGGGCACGTAGCCTCAGCGCGCTGGCATGGGGCTTCCATAGCC
TAAGTATCAATCAAGGGCTGCTGGATCAGGGCAAGATCGCCCTCAATCAGGCCAGTGGTGTTTTCCCTGACGGTACACCT
TTTCATATGGCGGGTGATGAGCCATTACCGCTACCTTTTGATCCGGGGGAGAACTGCCAAGGCAGTGTCGTGTGCCTTTC
GGTCCTGATGGATATACCCGGCAATACCTATATTGATCTGAAGAAGAGCAACCAAGGTAGCCGTTTCGTTGCGCTGGATG
CTGAAGTTCAAGACAGAAACCATGGCGTCGCTGCTGAAGGAACGCCATTGATCGCCACCCTTCAACTGGGGCAATTGCAA
TCCAAGCTCACCTTACGTGCCAGCGTCAGTGATGCAGAATCGATGCTGCCCGTAGCCTATATCAAAGAGCGCACCCGCGA
TGGGCGTCTGATTCTGGATGATAACTTCCTGCCACCCATGTTGGATTTTCGCGCCATAGGGTGGATCGATAATGCGGTAA
CCGAATTGCTAGGGTTGATCGTTCAGCGACTGGAATCGGTTTACCGGCCAGATGTGACGCTCTCAGTCGGTGGGTTATCG
GAGTTACTGGAACTGCTATTACTGCAAACACTCAGTGAATATAACCTAAAGATTTCACATGTGTTGATGCAAAAACAGGT
ACACCCTGAGCAGTTGTTCCAATTATTGCTTGGGTTGTTGGGGCGTCTCAGTACTATCCCTGGCGGAGAAAAACCGTGGT
CGAGGCAGGATCTGCTCTATACGCATCATGAACCGCACAACGGGTATTTCTCGCTGTTTGCCGCCTTACGGCGCGCACTC
TCACTGGTGATCGAAGCACCGGCAGTGGCGCTACCGTTTATCGAACGTGGCGACAATATTTACCTGTGCCAGAACGATTC
ACAACTGCGTCTGGAAAAACTGATCTTCACCGTCAGTTCCAAACTGCCTTCCGAGACCATTCGCACTTACTTCCCGGCGC
AAACCAAACTGGGGCCGGTGGAGAAAATTGTACAGTTGATCGACCTGCAATTGCCTGGCGCACGGATGATCCCGATGTCA
TCACCGCCAAGATATATTCCTTATTACCCGAATAGCGTCTATTTCGAAGTTGACCATGATGATCCTATGTATAAAGAAAT
GATGTCTGGTTCAGCTATCGCACTCAGCATCGTGGGTGATTTCCCTGAGTTGCGTTTTGAAGTATGGGGCTTGCGACAAG
GAAGGCTCGGATGA

Upstream 100 bases:

>100_bases
TCATCAAGAGCGTCAACAGACTGGCAAGTGTCAATAGACTGGCAAGTGTCAACAGACTGGAAAGCGTCAATAGACTAAAA
AGTTTCAACAGACTAAAAAG

Downstream 100 bases:

>100_bases
ACGAATTTGAACGCCAGATCCGTGCAGCCATTTCCGCAGCACGCAATGGCGCAAAACATGCGGAACAGTCACTGACTACA
CCAATGTGGCAAGCCAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; T6ss M; Protein ImpJ; Conserved Protein; Type VI Secretion Protein VasE; Type VI Secretion System Protein ImpJ; Temperature-Dependent Protein Secretion ImpJ; Type VI Secretion

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MQRTHNMLPKQRVAWVEGMLMEPQHFQQQERYLEHLTEMRARSLSALAWGFHSLSINQGLLDQGKIALNQASGVFPDGTP
FHMAGDEPLPLPFDPGENCQGSVVCLSVLMDIPGNTYIDLKKSNQGSRFVALDAEVQDRNHGVAAEGTPLIATLQLGQLQ
SKLTLRASVSDAESMLPVAYIKERTRDGRLILDDNFLPPMLDFRAIGWIDNAVTELLGLIVQRLESVYRPDVTLSVGGLS
ELLELLLLQTLSEYNLKISHVLMQKQVHPEQLFQLLLGLLGRLSTIPGGEKPWSRQDLLYTHHEPHNGYFSLFAALRRAL
SLVIEAPAVALPFIERGDNIYLCQNDSQLRLEKLIFTVSSKLPSETIRTYFPAQTKLGPVEKIVQLIDLQLPGARMIPMS
SPPRYIPYYPNSVYFEVDHDDPMYKEMMSGSAIALSIVGDFPELRFEVWGLRQGRLG

Sequences:

>Translated_457_residues
MQRTHNMLPKQRVAWVEGMLMEPQHFQQQERYLEHLTEMRARSLSALAWGFHSLSINQGLLDQGKIALNQASGVFPDGTP
FHMAGDEPLPLPFDPGENCQGSVVCLSVLMDIPGNTYIDLKKSNQGSRFVALDAEVQDRNHGVAAEGTPLIATLQLGQLQ
SKLTLRASVSDAESMLPVAYIKERTRDGRLILDDNFLPPMLDFRAIGWIDNAVTELLGLIVQRLESVYRPDVTLSVGGLS
ELLELLLLQTLSEYNLKISHVLMQKQVHPEQLFQLLLGLLGRLSTIPGGEKPWSRQDLLYTHHEPHNGYFSLFAALRRAL
SLVIEAPAVALPFIERGDNIYLCQNDSQLRLEKLIFTVSSKLPSETIRTYFPAQTKLGPVEKIVQLIDLQLPGARMIPMS
SPPRYIPYYPNSVYFEVDHDDPMYKEMMSGSAIALSIVGDFPELRFEVWGLRQGRLG
>Mature_457_residues
MQRTHNMLPKQRVAWVEGMLMEPQHFQQQERYLEHLTEMRARSLSALAWGFHSLSINQGLLDQGKIALNQASGVFPDGTP
FHMAGDEPLPLPFDPGENCQGSVVCLSVLMDIPGNTYIDLKKSNQGSRFVALDAEVQDRNHGVAAEGTPLIATLQLGQLQ
SKLTLRASVSDAESMLPVAYIKERTRDGRLILDDNFLPPMLDFRAIGWIDNAVTELLGLIVQRLESVYRPDVTLSVGGLS
ELLELLLLQTLSEYNLKISHVLMQKQVHPEQLFQLLLGLLGRLSTIPGGEKPWSRQDLLYTHHEPHNGYFSLFAALRRAL
SLVIEAPAVALPFIERGDNIYLCQNDSQLRLEKLIFTVSSKLPSETIRTYFPAQTKLGPVEKIVQLIDLQLPGARMIPMS
SPPRYIPYYPNSVYFEVDHDDPMYKEMMSGSAIALSIVGDFPELRFEVWGLRQGRLG

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51310; Mature: 51310

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTHNMLPKQRVAWVEGMLMEPQHFQQQERYLEHLTEMRARSLSALAWGFHSLSINQGL
CCCCHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
LDQGKIALNQASGVFPDGTPFHMAGDEPLPLPFDPGENCQGSVVCLSVLMDIPGNTYIDL
CCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEE
KKSNQGSRFVALDAEVQDRNHGVAAEGTPLIATLQLGQLQSKLTLRASVSDAESMLPVAY
EECCCCCEEEEEECEECCCCCCCCCCCCCEEEEEEHHHHHHHEEEEEECCCHHHHCHHHH
IKERTRDGRLILDDNFLPPMLDFRAIGWIDNAVTELLGLIVQRLESVYRPDVTLSVGGLS
HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHH
ELLELLLLQTLSEYNLKISHVLMQKQVHPEQLFQLLLGLLGRLSTIPGGEKPWSRQDLLY
HHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
THHEPHNGYFSLFAALRRALSLVIEAPAVALPFIERGDNIYLCQNDSQLRLEKLIFTVSS
ECCCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHCCCCEEEEECCCCHHHHHHHHHHHHH
KLPSETIRTYFPAQTKLGPVEKIVQLIDLQLPGARMIPMSSPPRYIPYYPNSVYFEVDHD
CCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEEEEEECCC
DPMYKEMMSGSAIALSIVGDFPELRFEVWGLRQGRLG
CHHHHHHHCCCEEEEEEECCCCHHHEEEECCCCCCCC
>Mature Secondary Structure
MQRTHNMLPKQRVAWVEGMLMEPQHFQQQERYLEHLTEMRARSLSALAWGFHSLSINQGL
CCCCHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
LDQGKIALNQASGVFPDGTPFHMAGDEPLPLPFDPGENCQGSVVCLSVLMDIPGNTYIDL
CCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEE
KKSNQGSRFVALDAEVQDRNHGVAAEGTPLIATLQLGQLQSKLTLRASVSDAESMLPVAY
EECCCCCEEEEEECEECCCCCCCCCCCCCEEEEEEHHHHHHHEEEEEECCCHHHHCHHHH
IKERTRDGRLILDDNFLPPMLDFRAIGWIDNAVTELLGLIVQRLESVYRPDVTLSVGGLS
HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHH
ELLELLLLQTLSEYNLKISHVLMQKQVHPEQLFQLLLGLLGRLSTIPGGEKPWSRQDLLY
HHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
THHEPHNGYFSLFAALRRALSLVIEAPAVALPFIERGDNIYLCQNDSQLRLEKLIFTVSS
ECCCCCCHHHHHHHHHHHHHHHHHCCCHHCCHHHCCCCEEEEECCCCHHHHHHHHHHHHH
KLPSETIRTYFPAQTKLGPVEKIVQLIDLQLPGARMIPMSSPPRYIPYYPNSVYFEVDHD
CCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEEEEEECCC
DPMYKEMMSGSAIALSIVGDFPELRFEVWGLRQGRLG
CHHHHHHHCCCEEEEEEECCCCHHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA